Protein

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Genbank accession
YP_004323647.1 [GenBank]
Protein name
hypothetical protein
RBP type
TF
Evidence UniProt/TrEMBL
Probability 1,00
TF
Evidence RBPdetect
Probability 0,78
Protein sequence
MSKLSVSGLSGITETLNQITIPAGNILDVEGHVLNTSTTAFQLPAGTTAQRPGSASAGYMRWNTSDLKIEIYNGSSWTQYTVEGTGGTVSTLGQTSATAATSAAAILAANPGAPDGVYWINHGSGAYQTYCLMEAGGFMLVGKIPASPADTSNPWSYSGARWSQQTTTNESGCQSIAGGDALNRGYYGYTLTEGFIFAMGDYRNWLYPKSIPRTGVTARNAFIGGQTNISSVDRENFLSWIGNTGVSRNNWDNQPYCNRIGFNRTDSSATGMRFGITMNNENECNSNDSSIGFGVYTNNQNSSGDRNAAAGGFRWNGTVRYPKDGWIFVK
Physico‐chemical
properties
protein length:330 AA
molecular weight: 35265,31990 Da
isoelectric point:6,13397
aromaticity:0,10909
hydropathy:-0,39970

Domains

Domains [InterPro]
DC_1111
ATT
3–128
DC_1111 DC_0901
G3DSA:2.60.120.1000
STR
86–179
G3DSA:2.60.120.1000
YP_004323647.1
1 330
Architecture
ATT
STR
ATT 3-128 | STR 129-330
Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Taxonomy

  Name Taxonomy ID Lineage
Phage Prochlorococcus phage Syn33
[NCBI] 		444878 Uroviricota > Caudoviricetes > Pantevenvirales > Brizovirus > Brizovirus syn33
Host Synechococcus sp. WH 7803
[NCBI] 		32051 Bacteria > Cyanobacteria > Oscillatoriophycideae > Chroococcales > Synechococcus >

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
YP_004323647.1 [NCBI]
Genbank nucleotide accession
NC_015285 [NCBI]
CDS location
range 27446 -> 28438
strand +
CDS
ATGAGTAAATTATCCGTAAGTGGTTTAAGTGGAATAACCGAAACTCTGAATCAGATAACAATTCCTGCTGGTAATATTTTAGATGTCGAAGGTCATGTACTTAATACAAGTACTACCGCATTTCAGTTACCTGCTGGCACTACTGCACAGAGACCTGGTAGTGCATCTGCTGGATATATGAGGTGGAATACCTCAGATTTGAAGATTGAGATTTATAATGGATCGAGTTGGACTCAATATACGGTTGAAGGTACTGGTGGTACAGTATCTACCTTAGGTCAAACTTCTGCAACTGCTGCAACTTCTGCTGCTGCTATTCTTGCTGCAAATCCTGGAGCACCCGATGGTGTTTATTGGATAAATCATGGTAGTGGTGCATATCAAACTTATTGTCTGATGGAAGCAGGAGGATTTATGTTGGTAGGTAAAATTCCTGCATCTCCTGCTGATACCAGTAATCCTTGGTCATATAGTGGTGCTAGATGGTCACAGCAAACTACTACTAACGAGTCAGGATGTCAAAGCATTGCTGGTGGAGATGCCTTAAATAGAGGGTATTATGGTTATACTTTGACCGAAGGTTTTATCTTCGCGATGGGTGACTATCGTAATTGGTTATATCCTAAATCAATTCCTAGAACAGGTGTTACTGCTAGAAATGCCTTTATTGGAGGACAGACTAATATATCTTCAGTCGATAGAGAAAACTTTTTGAGTTGGATTGGTAACACTGGTGTCAGCAGAAATAACTGGGATAATCAACCTTATTGTAATAGAATTGGTTTTAATCGAACGGATTCTAGTGCCACAGGTATGAGATTTGGTATTACTATGAACAATGAAAACGAGTGTAACTCTAACGACTCTTCGATCGGGTTTGGAGTTTACACCAACAATCAAAATTCTAGCGGTGACAGAAATGCTGCTGCTGGCGGATTCCGTTGGAATGGCACTGTTCGCTATCCAAAAGATGGTTGGATTTTTGTAAAATAA

Genome Context

Genome Context

Tertiary structure

PDB ID
29d247a4daca0f03bf4913fd23df0fa2fbf275bd6a2747a156a17432df536afa
ESMFold
Source ESMFold
Method ESMFold
Resolution 0,5752
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50

Literature

Title Authors Date PMID Source
The Genome Sequence of Cyanophage Syn33 Henn,M.R., Sullivan,M.S., Osburne,M.S., Levin,J., Malboeuf,C., Casali,M., Russ,C., Lennon,N., Erlich,R., Young,S.K., Koehrsen,M., Yandava,C., Zeng,Q., Alvarado,L., Anderson,S., Berlin,A., Borenstein,D., Chen,Z., Engels,R., Freedman,E., Gellesch,M., Goldberg,J., Green,L., Griggs,A., Gujja,S., Heiman,D., Hepburn,T., Howarth,C., Jen,D., Larson,L., Lewis,B., Mehta,T., Park,D., Pearson,M., Roberts,A., Ryan,E., Saif,S., Shea,T., Shenoy,N., Sisk,P., Stolte,C., Sykes,S., Walk,T., White,J., Yu,Q., Coleman,M.L., Huang,K.H., Weigele,P.R., DeFrancesco,A.S., Kern,S.E., Thompson,L.R., Fu,R., Hombeck,B., Chisholm,S.W., Haas,B., Nusbaum,C., Galagan,J. and Birren,B. 2011-09-23 — GenBank