Protein

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Genbank accession
AUS00192.1 [GenBank]
Protein name
tail spike protein with colonic acid degradation activity
RBP type
TF
Evidence Phold
Probability 1,00
TSP
Evidence DepoScope
Probability 1,00
TSP
Evidence RBPdetect
Probability 0,91
TSP
Evidence RBPdetect2
Probability 0,94
Protein sequence
MATPGGLVDKQELIDAQLDTAHLGRVVNSKDASGAPISTSTNRTGGVNKTLDALEGEYQSDIDNFVQVSGQVIVDKTAEFDASIANKEAEADAAIDSYRLLSKGPYAAGIELEDKFQYITYNGESYFATNPPYTTTATTPDNDGNLFISGYTTFENVANKIGNKNELSNSNFLTPSPDAITHPNATPESYVAGTQIFSGVYAGDSGCTVTFIDGRVNCTAGDYKFKLPNTGGLERIPVFTSSVSDYDGIPKTTGVSHALVGDEYVVTVTPTAGDVFSVKLEQGGVATWHEATSYNYQLLQVAIANNVSFDQVALLALGVVSGIHYFWDANTQATFRPSSPISGTITSVGSVGVTVDLVVDGNTITLYKLVKNSYLARAAGLDYQGYWSGGLTIPADSRIDNKAWWQDEIGSFVIPKSDLSFVTGATWDLDSDNWSLEPIMTLRQHWLEGGDVQAFGAIPDYYLPDGSVNPSPTDNREAIQACFDYCVDKNISMTLIGDYHYTGGLTISSRQDESNRRILNAQGALHVNLDGTGFTQALCVGDSSANGTYPLIIDGFLRIINAGTPYVGTGFEAENAAYGDYSVICSGWDIGTYNNGSIFTKYNGRGYLYSDNNLDFKITSNENPGGLRFASNLVTLEDMILNSCQKLEVNTISGLPPLSDTSGGLIRLKRVNFEGQSGVANDAVPMIQIRNAGEVVVAQVMDFIEFDNCGFEAFNANKITINQTKSKIALNNCFFARGANNDFIVHNDDKCFTSFNKTSIYLADQQPASGCIVSRNGSATDAYRSNIESINSVMYGSTGVLFPLHDGLPSDHMILSSSSSKRQVSVQLNSTYPATAVDDYMTNVEINLFNIITDFVGAGWISAEITMHSGTGASYAYSKIVATKQGAAIIYTTDNDLTLSDGRWNLKFPVVQKADFFKPQFTIDSIVNINNYPLP
Physico‐chemical
properties
protein length:935 AA
molecular weight: 100895,74640 Da
isoelectric point:4,50662
aromaticity:0,10160
hydropathy:-0,16182

Domains

Domains [InterPro]

No domain annotations available.

Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Tail Spike Domain Segmentation

Tail Spike Domain Segmentation

This protein has been segmented into three structural domains: N-terminal, central domain, and C-terminal.

Domain Layout
N-terminal
Central
C-terminal
AUS00192.1
1 935
Domain Start End Length (AA) Confidence
N-terminal 1 219 219 0,7563
Central domain 220 800 582 0,6152
C-terminal 801 935 134 0,9715
Legend: N-terminal Central domain C-terminal
3D Structure with Domain Coloring

The structure is colored according to the domain segmentation: N-terminal (blue), Central (green), C-terminal (pink).

Domain Coloring
N-terminal
1-219
Central
220-800
C-terminal
801-935

Taxonomy

  Name Taxonomy ID Lineage
Phage Vibrio phage 1.271.B._10N.286.54.B4
[NCBI] 		1881364 Viruses > Duplodnaviria > Heunggongvirae > Uroviricota > Caudoviricetes
Host Vibrio lentus
[NCBI] 		136468 cellular organisms > Bacteria > Pseudomonadati > Pseudomonadota > Gammaproteobacteria > Vibrionales

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
AUS00192.1 [NCBI]
Genbank nucleotide accession
MG592639.1 [NCBI]
CDS location
range 56139 -> 58946
strand +
CDS
ATGGCAACTCCAGGCGGTCTCGTCGATAAGCAAGAACTTATCGACGCACAACTCGACACGGCACACTTAGGTCGTGTCGTAAACTCTAAGGACGCTTCGGGCGCTCCTATCTCTACATCTACGAACCGTACCGGCGGGGTGAATAAAACACTCGACGCGCTTGAGGGGGAGTACCAATCTGATATTGATAACTTCGTTCAAGTTTCGGGTCAAGTTATTGTTGACAAGACAGCTGAATTTGATGCGTCTATCGCAAACAAAGAAGCGGAAGCGGACGCGGCGATTGATTCTTATCGATTATTAAGCAAGGGACCTTACGCCGCGGGAATAGAGTTAGAGGATAAGTTCCAGTACATTACATATAACGGCGAATCTTACTTTGCAACCAACCCGCCATATACAACAACTGCGACCACTCCAGATAATGACGGCAATTTGTTTATTAGTGGTTACACCACTTTTGAAAACGTAGCAAACAAAATAGGCAACAAAAACGAGCTATCCAACTCAAACTTCCTTACACCGTCACCTGATGCGATCACGCACCCTAACGCAACGCCTGAATCATACGTAGCAGGTACGCAGATTTTTAGCGGTGTATACGCAGGTGATAGTGGCTGTACCGTTACATTTATCGACGGTCGCGTTAACTGCACGGCAGGTGATTATAAATTTAAGCTACCTAACACCGGTGGTCTTGAGCGTATCCCTGTATTTACATCAAGCGTGTCAGATTATGACGGAATCCCAAAAACTACAGGCGTTAGTCACGCGTTAGTCGGCGACGAGTACGTAGTTACCGTTACACCTACTGCTGGTGATGTGTTTAGCGTCAAGCTTGAACAGGGGGGTGTGGCGACTTGGCATGAGGCTACATCTTATAACTATCAACTTCTTCAGGTTGCAATCGCTAACAACGTTTCATTTGATCAAGTCGCATTGCTAGCACTCGGTGTGGTGTCAGGCATTCACTACTTTTGGGACGCTAACACACAGGCTACTTTTAGGCCAAGCTCACCAATAAGCGGTACGATTACTAGCGTTGGTTCGGTTGGCGTTACGGTGGATTTAGTTGTTGATGGAAACACAATTACCCTGTACAAGCTAGTTAAAAATAGCTACTTAGCCCGCGCTGCGGGTCTTGATTACCAGGGTTACTGGTCAGGTGGATTGACGATTCCTGCTGATTCACGCATTGATAACAAGGCGTGGTGGCAGGATGAGATCGGAAGTTTTGTAATTCCAAAAAGCGACTTGTCATTTGTTACAGGTGCTACGTGGGATTTAGATTCAGATAACTGGTCGCTAGAACCCATCATGACGCTACGTCAGCACTGGCTTGAAGGGGGTGACGTCCAAGCATTTGGGGCTATTCCTGATTATTATCTACCTGACGGCTCCGTAAACCCATCACCAACTGATAACAGAGAGGCAATACAGGCCTGCTTTGATTATTGCGTTGATAAAAATATATCAATGACACTAATAGGTGACTATCACTACACAGGCGGCCTAACCATATCATCCCGTCAAGACGAGAGTAATCGACGTATATTAAATGCTCAGGGTGCGCTACATGTGAATCTAGATGGGACTGGGTTCACACAGGCTCTTTGCGTTGGAGATAGCTCAGCTAATGGAACATACCCTTTAATTATTGATGGTTTTTTACGAATCATCAATGCGGGGACTCCGTATGTTGGAACCGGATTTGAGGCCGAAAACGCGGCGTACGGTGATTACTCTGTTATTTGTTCTGGTTGGGATATTGGAACATATAACAATGGTTCGATTTTTACAAAATATAATGGCAGAGGATATTTGTATTCAGATAACAATCTGGATTTTAAAATAACATCTAACGAAAACCCCGGCGGCCTTAGGTTTGCGTCTAACCTAGTAACACTAGAAGACATGATTTTAAACTCATGTCAAAAGTTAGAGGTAAATACCATATCCGGATTGCCACCACTATCTGATACAAGCGGTGGGTTGATAAGGCTCAAGCGCGTTAACTTTGAAGGTCAGAGCGGGGTTGCTAACGACGCCGTACCGATGATCCAAATCCGAAATGCCGGAGAGGTTGTTGTTGCTCAGGTAATGGATTTTATTGAGTTTGATAACTGCGGGTTTGAAGCGTTTAACGCCAATAAAATTACAATAAACCAGACAAAGTCAAAAATAGCACTAAACAACTGCTTCTTTGCTAGAGGTGCTAACAATGATTTTATCGTACATAATGATGATAAGTGTTTTACATCGTTCAACAAAACATCTATTTATTTAGCCGATCAACAGCCAGCGTCTGGATGTATAGTATCTAGAAATGGCTCAGCCACTGACGCGTACCGTTCAAACATCGAGTCAATAAATAGTGTGATGTATGGTAGCACGGGAGTTCTTTTCCCTTTGCACGATGGGCTGCCATCTGATCACATGATTTTGTCGTCATCATCTAGTAAGAGACAAGTGTCTGTACAACTAAATAGCACTTATCCTGCAACAGCCGTTGATGATTATATGACAAACGTCGAGATAAATTTATTCAATATAATTACTGACTTTGTCGGAGCAGGGTGGATTTCAGCAGAAATTACGATGCATTCCGGCACAGGTGCAAGCTACGCATACTCTAAAATAGTAGCAACAAAACAGGGTGCGGCAATAATATACACAACAGATAATGATTTAACATTGAGTGATGGTAGGTGGAATCTTAAATTCCCAGTGGTTCAGAAGGCTGATTTTTTCAAACCTCAATTTACAATTGATTCGATAGTTAACATTAATAACTACCCGTTGCCATAA

Genome Context

Genome Context

Tertiary structure

PDB ID
a07746068bce04c9ea3d0b868fb64c57163de196435bc48d74de4cadc7429843
ESMFold
Source ESMFold
Method ESMFold
Resolution 0,5924
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50

Literature

Title Authors Date PMID Source
A major lineage of nontailed dsDNA viruses as unrecognized killers of marine bacteria Kauffman,K.M., Hussain,F.A., Yang,J., Arevalo,P., Brown,J.M., Chang,W.K., VanInsberghe,D., Elsherbini,J., Cutler,M.B., Kelly,L. and Polz,M.F. 2018-01-24 — GenBank