Protein

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Genbank accession
QIG67268.1 [GenBank]
Protein name
putative tail protein
RBP type
TSP
Evidence DepoScope
Probability 1,00
TSP
Evidence RBPdetect
Probability 0,91
TSP
Evidence RBPdetect2
Probability 0,95
Protein sequence
MPESALVIWADGPSSAPYEPDKALIRAWGYWVESTISTLSSGATVSFLSLDALNANLNYPAYTLAWVNGDPVAENNGIYRKIGASGTGSWVRFADLPYSFIAATATAEGEPSAIQAVTGIPVSTSAMIVLDILEANDASPVTVSFNGGDPLTIKSNTGSDIATGGLLAGMRVLGTIIGDTFRLITDQVDTAIVAEAEAAMTAAIGARNGAKEWANNAFGVPVSVPAGGDGSTTYSAKHWAEVALEGGTILRGYLYGGEISNNVTDAVNDLDIAAGVAASDDTTPILMVWTSVTRQLDVAYGTGSGGRFDSAIADGVWHIFACSNGSNTIIGFSQNVNPTSAPNYPSGYTKYRRIGSRVRMSGSLRKVIQRGDRHILYDPVVQNGGSAIAVTTAEAFLTLSGVPTGIEVDVKLVASFTSATVSSGALLTSPLVNNPTPGASQPGGINVGHIQVASQYAANELNKRTNTSGQIRHRGGASGSLYLTLHEWTDDRGAAIFKSASAGSSRGIGSAVLSADYPTLQDAITAASGRRLIVEAGSYVVTSSLTGVDNIEIESNGPVTISTTADIAILDMTGKTNWMLRGMFRFVGDATPYTGYPGSLADSGQKGIKLSACDRYMIDGAIEFENINGSGLYAELSAGSWQHKGLIRGIRAKSCYHGIRYTNVAEYDHVTDFSIDNCAFAVRVESGNIMFANGKMNYNSVCVSLAGGTNNAHGEFNNCQMNHSNYALSASDITLGEVFNGCIALGNQAGAGHGAIQIINSVGIQWNGGQIGGDITLDATSKMALMNAYIRTDLTAAPAVTSGGVFTAKNNIANTGGLWAYNN
Physico‐chemical
properties
protein length:823 AA
molecular weight: 85634,55640 Da
isoelectric point:5,04977
aromaticity:0,07776
hydropathy:0,02066

Domains

Domains [InterPro]
DC_1788
STR
22–575
DC_1788
IPR011050
STR
510–753
IPR011050
IPR011050
STR
516–753
IPR011050
QIG67268.1
1 823
Architecture
STR
STR 22-753 |
Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Tail Spike Domain Segmentation

Tail Spike Domain Segmentation

This protein has been segmented into three structural domains: N-terminal, central domain, and C-terminal.

Domain Layout
N-terminal
Central
C-terminal
QIG67268.1
1 823
Domain Start End Length (AA) Confidence
N-terminal 1 501 501 0,5132
Central domain 502 812 312 0,9774
C-terminal 813 823 10 0,6958
Legend: N-terminal Central domain C-terminal
3D Structure with Domain Coloring

The structure is colored according to the domain segmentation: N-terminal (blue), Central (green), C-terminal (pink).

Domain Coloring
N-terminal
1-501
Central
502-812
C-terminal
813-823

Taxonomy

  Name Taxonomy ID Lineage
Phage Rhizobium phage RHph_TM3_3_3
[NCBI] 		2509762 Viruses > Duplodnaviria > Heunggongvirae > Uroviricota > Caudoviricetes
Host No host information

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
QIG67268.1 [NCBI]
Genbank nucleotide accession
MN988468 [NCBI]
CDS location
range 24092 -> 26563
strand +
CDS
ATGCCTGAAAGCGCACTCGTCATCTGGGCTGATGGCCCGTCGTCCGCCCCGTATGAGCCTGACAAGGCATTGATCCGGGCGTGGGGCTATTGGGTCGAGTCCACCATCAGCACCTTGTCTTCGGGAGCGACGGTCTCTTTCCTCTCGCTGGATGCGCTGAACGCCAACCTTAACTATCCGGCCTACACGCTCGCGTGGGTGAACGGAGATCCCGTCGCCGAAAACAACGGCATCTATCGGAAGATCGGCGCATCCGGAACTGGTTCGTGGGTGCGGTTTGCCGATCTGCCGTACTCGTTCATCGCAGCGACTGCGACGGCGGAAGGCGAGCCCAGCGCGATTCAGGCGGTGACCGGCATTCCCGTTTCCACGTCGGCCATGATCGTCCTCGACATCCTGGAGGCAAACGACGCTTCTCCGGTGACGGTCTCTTTCAACGGCGGCGATCCGCTGACGATCAAGTCCAACACGGGCAGCGATATCGCCACCGGCGGCCTGCTGGCCGGGATGCGCGTGCTCGGGACCATCATCGGGGACACCTTCCGGCTGATAACCGACCAGGTCGACACGGCCATCGTGGCCGAGGCAGAAGCTGCGATGACGGCCGCGATCGGCGCGCGAAACGGCGCCAAGGAATGGGCGAACAACGCTTTTGGCGTGCCCGTCTCCGTCCCGGCCGGCGGCGATGGTTCGACGACCTATTCCGCGAAGCATTGGGCCGAGGTCGCGCTCGAGGGCGGAACGATCCTGCGCGGCTATCTCTATGGCGGCGAGATCAGCAACAACGTCACCGATGCGGTCAACGATCTTGATATTGCGGCTGGTGTGGCGGCATCCGATGACACGACCCCGATTTTGATGGTGTGGACATCAGTCACCCGCCAGCTTGACGTCGCCTATGGCACGGGTAGCGGCGGCCGATTCGACAGCGCCATCGCTGACGGCGTCTGGCACATCTTTGCATGCTCCAATGGTTCGAACACGATCATCGGCTTTTCGCAAAACGTTAACCCGACATCGGCTCCCAATTATCCGAGCGGCTACACCAAGTACCGGCGCATCGGTTCTCGCGTGCGTATGTCCGGATCCTTGAGGAAGGTGATCCAGCGCGGTGACCGGCACATTCTTTACGATCCCGTCGTGCAAAATGGCGGCTCGGCGATTGCGGTTACCACGGCTGAAGCCTTTCTGACCCTCTCGGGAGTGCCGACCGGTATAGAGGTCGACGTGAAGCTGGTAGCATCGTTCACCTCAGCGACGGTAAGCTCCGGCGCCCTCCTTACGTCGCCTCTCGTCAATAACCCCACGCCAGGTGCCAGCCAGCCGGGCGGCATCAACGTCGGCCATATTCAGGTCGCCAGCCAATACGCAGCGAATGAGCTGAACAAGAGGACGAACACGTCCGGTCAGATCCGCCATCGCGGCGGCGCGTCGGGTTCGCTCTATCTCACGCTGCATGAATGGACCGATGACCGCGGCGCAGCCATATTCAAGAGCGCCTCGGCGGGCTCGAGCCGGGGCATTGGTTCCGCAGTCCTCTCTGCCGACTATCCGACGCTGCAGGATGCCATCACGGCAGCAAGCGGGCGCCGGCTGATTGTTGAGGCTGGAAGCTATGTCGTCACGAGCTCGTTGACTGGCGTTGACAATATCGAGATCGAAAGCAACGGCCCGGTAACTATCAGCACGACCGCCGATATCGCGATCCTCGACATGACCGGCAAGACAAACTGGATGTTGCGCGGCATGTTCCGCTTCGTCGGTGATGCCACGCCTTATACCGGCTACCCGGGATCGCTCGCCGATAGCGGCCAGAAGGGGATCAAGCTGTCGGCTTGCGACCGCTACATGATCGATGGGGCGATCGAGTTCGAGAATATCAACGGCTCGGGCCTCTATGCCGAACTCAGCGCCGGAAGCTGGCAGCATAAAGGCCTCATCCGGGGTATCCGTGCCAAGAGCTGCTATCACGGCATCCGCTACACCAACGTGGCGGAATACGACCATGTGACGGACTTCTCGATCGACAACTGCGCTTTCGCAGTCCGCGTCGAGAGCGGGAACATCATGTTTGCTAACGGCAAGATGAATTATAATTCCGTGTGCGTTTCCTTGGCCGGAGGGACCAATAATGCGCACGGTGAGTTCAACAATTGCCAGATGAACCACTCGAACTACGCGCTCAGCGCTTCGGACATCACGCTCGGCGAGGTGTTCAATGGCTGCATTGCGCTCGGCAATCAGGCGGGGGCCGGGCACGGCGCCATCCAGATCATCAACTCGGTCGGCATCCAGTGGAATGGCGGGCAGATCGGTGGCGATATCACCCTCGATGCCACCTCGAAGATGGCATTGATGAACGCCTACATCAGAACGGACCTGACCGCTGCGCCGGCCGTGACGTCTGGCGGCGTGTTCACCGCGAAGAACAATATCGCAAACACCGGCGGCCTTTGGGCCTACAACAATTAA

Genome Context

Genome Context

Tertiary structure

PDB ID
c17372566b1fa6dffb56e2d8087529ffd768cded3125b031e857ad8ea2cb06ca
ColabFold
Source ColabFold
Method ColabFold
Resolution 0,2927
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50

Literature

Title Authors Date PMID Source
Patterns of diversity and host range of bacteriophage communities associated with bean-nodulatin bacteria Vann Cauwenberghe,J., Santamaria,R.I., Bustos,P., Juarez,S. and Gonzalez,V. 1998-01 — GenBank