Protein

View in Explore
Genbank accession
AKE44760.1 [GenBank]
Protein name
tail fiber protein
RBP type
TF
Evidence Phold
Probability 1,00
Protein sequence
MTELLNDRYLDDSNENFTRILFRAGYAPQSKELNAIQSSLMRQVSAIGDHLFKDGSMVVGGTIKNAKGKSLLIESTYNGLNVDLESFIGKTIVELDASGAETGARGLVFAVSSETSTDPSCLHYLDENVSASIGEGSTVRVSGTSSFATIRTFEQPVRSCLYARLLGGIFYFNKTFVRVDDQLIVYSKFDDLYSGFVGLQFERNVITEFDDPSLFDSARGYSNFNGAGAHRETYTSKIVSFTFTSERPENFVSLLEIREGEVKAEANNPAYNEIGDVLATRTFDESGDYVVNYFRADLVDKIEIPVVKIEPSLTSALVLQATTAIPHSYSVGDQIFVAEDSIYTGDYKVKEVLTETVFTFETETANTSIEQNKKVYRTDHFGVLVSPGKAYVKGYQVWLPGTTKVEVPKARTTETSRNASLSIGYGRYVVVTTPTGLFDTAAKQQVSLRNAANTAIGTARVHAITRASAGKYNLYLFDIKMNAGQSSALVTNIYAATGANGSAVTAPVSGAFNVRSADSRAMFQQISDVKIATLRPENIDVLSYSTQKLMTVASASNQAVFTLTGTETFLGARSQNIVASSTFLDEYVVVNAAGAVQTLTSATISADGKTLTLVAAAMTGNITISAPVSVTPAVKKKIKKTKTYSTSAVTSSARKYTFDVVDVISATVKNSTGVDVTSMFKFDSGQRDDMYDYGSVTLQSGASIPTSPLSIEIEYFEHSGTGYFSVDSYSGIDFSDIPVYKSEDLQDTYDLTDVIDFRYVKTGASSFASSLTPIPEGLTVIDFDYYLPRKDLVTVSKNGRVNIVQGIPSLTPVYPVASENEMILFKLDIGPYTKDYAEEVFVYPEQNRRYTMKDVGKLDQRISRLEYETSLNALESLAKTADIVDEDGNSRYKTGFLVDNFSGHGIGDTSSSDYRAAIDRQNRVLRPAFKQTAFGTETFEIDGFQRVGNSDIGYFMMLPYTQEVLTENIIASKGVSVNPYLVAKRKGTALLNPSSDYWKDTTSLPVRNVDMTADLDNGIDLGVVWNDWEEAWSGSTSQVSTSRSTNRSGNRTTTTTRTATTTTTRTNEERTGEQTSLDFVDTTQSIGKYVVDVNVSYYMRAIAINFKLSGMRPDTDLHVFIDGSNINSLVTPGLAPKGQGSVRTDSSGNASGKISIPNGRFRTGERLITFSDEPNNVSDNATTEASFTFVSSGLNVTNQETTISTSVPQLVSTPVNETRTNVSVSTNVSSSSQTTVTQFAQSRFRSDNREDNRGSDPLAQSIWVSPQSFPNGAYVTELTLYFKRKPTDTTHPLVVQLRPSENGYPSSTDIIPYSEVSVPNSQVKIPKNTNDMASIQAAPTVVKFPVPIYVEPGKYFNFVLLSSHSDYEVYVSEMGQRIIGTTINIYKQPVLGSSFRSQNAQTWTAYQNEDVMHGIKICKFSTSDIGKFSFRNQKIDEFKYNVLNWRPQVIKFEDHIVEYTLSTRDSTTSTTVTEKIVEDKNFNLKTERIVRDDTQDIKIAVQARTVDSYTSPLFELNKCYGMLIGNVVNNMGLVRRNFLIVSGGSGYTSNSVITFTGGGGSGAVYKPVVSGGKIVDLIEVNQGSGYTSAPTIAVSGGTGANIVFSGFETSPIDGNADARYVSKVVTLQDDYDADRADVYLDISAPSGTDVKIYYRCKNNSDEQAISAKNWVEVVKNNRKTSVTDEFIETKYEIDLTYTGSNGAVYDASNSVQVKIVLLASNTSIVPKCKNFRLITSV
Physico‐chemical
properties
protein length:1737 AA
molecular weight: 190091,71610 Da
isoelectric point:5,18351
aromaticity:0,09499
hydropathy:-0,25999

Domains

Domains [InterPro]
DC_0414
STR
69–1013
DC_0414
IPR032096
STR
197–294
IPR032096 IPR032096 DC_0082
AKE44760.1
1 1737
Architecture
STR
RBD
STR 69-1013 | RBD 1014-1737
Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Taxonomy

  Name Taxonomy ID Lineage
Phage Sinorhizobium phage phiM9
[NCBI] 		1636182 Uroviricota > Caudoviricetes > Pootjesviridae > Emnonavirus phiM9 >
Host Sinorhizobium meliloti
[NCBI] 		382 cellular organisms > Bacteria > Pseudomonadati > Pseudomonadota > Alphaproteobacteria > Hyphomicrobiales

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
AKE44760.1 [NCBI]
Genbank nucleotide accession
KP881232.1 [NCBI]
CDS location
range 78447 -> 83660
strand +
CDS
ATGACAGAACTCCTTAACGATCGCTACCTGGACGACTCCAACGAAAACTTCACGAGGATCCTGTTCCGGGCTGGATATGCTCCTCAGAGCAAAGAGCTCAATGCGATCCAGTCGTCCTTGATGCGTCAGGTATCTGCGATCGGTGACCACCTGTTCAAAGACGGGTCGATGGTCGTCGGAGGCACGATCAAGAACGCGAAAGGCAAGTCTCTCCTCATCGAGAGCACCTACAACGGTCTGAACGTCGATCTAGAATCCTTCATCGGAAAGACGATCGTAGAACTGGATGCATCTGGTGCAGAAACTGGAGCACGCGGTCTCGTCTTCGCAGTCTCCTCTGAAACTTCTACTGATCCGAGCTGTCTGCATTACCTGGATGAGAACGTCTCTGCCTCTATCGGCGAAGGTTCGACGGTTCGAGTTTCTGGCACGTCTTCGTTTGCTACGATCCGCACTTTCGAACAGCCTGTTCGCAGCTGCTTGTATGCTCGTCTCCTCGGTGGCATCTTCTACTTCAACAAGACTTTCGTTCGAGTTGATGACCAGCTGATCGTCTACTCCAAGTTCGATGACCTCTACAGCGGCTTCGTTGGTCTGCAGTTCGAGCGTAACGTAATCACTGAGTTCGATGATCCTTCTCTGTTCGACTCTGCTCGTGGATACTCGAACTTCAACGGTGCTGGTGCACATCGCGAAACCTACACGTCGAAGATCGTTTCGTTCACTTTCACGAGTGAGCGTCCTGAGAACTTCGTCTCGCTCCTCGAGATCCGTGAAGGTGAAGTCAAGGCAGAAGCAAACAATCCTGCGTACAACGAGATCGGTGATGTTCTCGCTACTCGCACGTTCGACGAGTCTGGCGATTACGTCGTGAACTACTTCCGTGCTGACCTCGTTGACAAGATCGAGATCCCTGTCGTGAAGATCGAGCCGTCTCTGACTTCGGCTCTGGTTCTCCAGGCTACGACTGCAATTCCTCACAGCTACTCTGTCGGCGATCAGATCTTCGTTGCTGAAGATTCGATCTACACTGGTGACTACAAAGTCAAGGAAGTCCTCACCGAAACGGTGTTCACTTTCGAGACTGAGACAGCAAACACTTCGATCGAACAGAACAAGAAAGTCTACCGCACGGATCACTTCGGTGTTCTCGTATCGCCTGGTAAGGCTTACGTCAAAGGATATCAAGTCTGGCTTCCTGGCACGACGAAGGTCGAAGTTCCGAAAGCACGTACGACCGAGACTTCTCGGAACGCTTCTCTGTCTATTGGTTATGGACGGTACGTCGTCGTAACGACTCCGACCGGACTGTTCGACACCGCAGCTAAGCAACAGGTGTCTCTCCGCAACGCAGCTAACACTGCAATCGGTACTGCACGAGTCCATGCGATCACTCGTGCATCTGCTGGAAAATACAACCTCTATCTCTTCGACATCAAGATGAACGCTGGACAGAGTTCTGCTCTTGTCACGAACATCTACGCTGCTACAGGCGCGAATGGTTCTGCAGTGACTGCTCCTGTCTCTGGTGCATTCAATGTTCGTTCTGCTGACTCGCGCGCAATGTTCCAGCAGATCTCGGATGTCAAGATTGCGACTCTTCGTCCTGAGAACATTGACGTTCTTTCGTACTCGACTCAGAAGCTCATGACTGTTGCTTCTGCTTCGAACCAGGCTGTATTCACTCTGACTGGAACTGAGACGTTCCTTGGAGCTCGGAGCCAGAACATCGTTGCTTCTTCGACCTTCCTCGATGAGTACGTCGTAGTCAACGCTGCTGGTGCTGTACAGACTCTAACGAGTGCTACGATCTCTGCTGACGGCAAGACCCTCACTCTCGTTGCTGCTGCAATGACTGGCAACATCACGATCAGTGCACCGGTCTCTGTGACTCCTGCTGTCAAGAAGAAGATCAAAAAGACGAAGACCTACTCGACTTCGGCTGTCACTTCGAGTGCACGAAAGTACACCTTCGATGTCGTTGACGTGATCTCTGCTACGGTGAAGAATTCCACTGGTGTCGACGTGACTTCGATGTTCAAGTTCGACTCTGGTCAGCGTGATGACATGTACGACTACGGCTCGGTCACTCTGCAGTCTGGTGCTAGCATTCCGACTTCTCCTCTGTCGATCGAGATCGAGTACTTCGAACACTCTGGAACTGGTTACTTCAGCGTAGACAGCTACTCCGGTATCGACTTCTCCGATATCCCTGTGTACAAGTCGGAAGATCTCCAGGACACGTACGACCTCACTGACGTCATCGACTTCCGCTATGTGAAGACAGGTGCTTCGTCTTTCGCAAGCTCGTTGACTCCAATCCCTGAAGGTCTGACTGTCATCGACTTCGACTACTACCTACCGCGTAAGGATCTTGTTACTGTTTCGAAGAACGGTAGAGTGAACATCGTACAGGGCATTCCGTCTCTGACTCCGGTCTATCCCGTTGCTTCCGAGAACGAGATGATTCTGTTCAAGCTCGACATCGGTCCGTACACGAAGGATTACGCTGAGGAAGTCTTCGTTTATCCCGAACAGAACCGCCGTTACACGATGAAGGACGTCGGTAAGCTCGACCAGCGTATCTCGCGTCTTGAGTACGAGACTTCTTTGAACGCGCTCGAGTCTCTCGCGAAGACCGCGGACATCGTTGACGAAGACGGAAACAGCAGGTACAAAACCGGGTTCCTCGTCGATAACTTCTCTGGTCATGGGATCGGTGACACGTCTTCCAGTGACTACCGTGCTGCAATCGATCGTCAGAACCGAGTCCTTCGTCCTGCTTTCAAGCAGACTGCATTCGGTACTGAGACTTTCGAGATCGATGGCTTCCAGCGAGTTGGCAACAGTGACATCGGCTACTTCATGATGCTTCCTTACACTCAGGAAGTCCTCACGGAGAACATCATCGCTTCGAAAGGTGTCTCTGTCAATCCGTACCTCGTTGCGAAACGGAAAGGCACTGCGCTTCTGAACCCTTCCAGCGACTACTGGAAAGACACGACTTCGCTTCCGGTCCGTAACGTCGACATGACTGCTGATCTCGACAACGGCATTGATCTTGGTGTTGTTTGGAACGACTGGGAAGAAGCCTGGTCTGGTTCTACGTCGCAAGTGTCCACTTCTCGGTCAACGAACCGTTCTGGAAACAGGACGACCACTACGACGAGAACTGCTACCACGACAACCACTCGGACCAACGAAGAGAGAACCGGTGAACAGACGTCGCTTGACTTCGTTGACACCACTCAGTCGATCGGCAAGTATGTCGTTGACGTGAACGTCTCGTACTACATGAGAGCGATCGCGATCAACTTCAAGCTTTCCGGCATGCGTCCTGACACCGACCTTCACGTGTTCATCGACGGTTCGAACATCAACAGCCTAGTCACTCCTGGACTTGCTCCGAAAGGACAAGGTTCTGTTCGCACTGACTCGTCTGGCAATGCTTCTGGTAAGATCTCGATCCCGAACGGTCGTTTCCGTACAGGTGAACGTCTGATCACGTTCTCTGATGAACCGAACAACGTCTCGGACAATGCTACGACCGAAGCATCGTTCACCTTCGTCTCTTCTGGTCTGAACGTCACGAACCAGGAAACGACGATCTCCACCAGTGTTCCGCAGCTCGTTTCGACTCCTGTAAACGAGACTCGCACGAATGTCTCTGTGTCTACGAACGTCTCTTCGTCCTCGCAGACGACTGTGACTCAGTTCGCTCAGTCGAGGTTCAGAAGCGATAACCGTGAAGATAACCGGGGAAGCGATCCGCTGGCTCAGTCGATCTGGGTGTCTCCACAGAGCTTCCCGAACGGTGCTTACGTCACCGAACTGACTCTGTACTTCAAGAGGAAGCCGACTGATACAACTCATCCTCTGGTTGTTCAGCTGCGTCCTTCGGAAAACGGGTATCCGTCTTCGACTGACATCATTCCTTACTCCGAGGTCTCTGTTCCTAACTCACAGGTCAAGATCCCGAAGAACACGAATGATATGGCTTCGATCCAGGCTGCTCCGACAGTTGTGAAGTTCCCTGTTCCGATCTACGTCGAACCTGGCAAGTACTTCAACTTCGTTCTGTTGTCCTCGCACTCTGACTACGAAGTCTACGTATCGGAAATGGGTCAGCGTATCATCGGTACGACGATCAACATCTACAAGCAGCCTGTTCTCGGTTCTTCCTTCCGTTCGCAGAATGCTCAGACCTGGACTGCTTACCAGAACGAAGATGTCATGCATGGCATCAAGATCTGCAAGTTCTCCACGAGCGATATCGGTAAGTTCAGCTTCCGGAACCAGAAGATCGACGAGTTCAAGTACAACGTTCTGAACTGGCGTCCGCAGGTGATCAAGTTCGAAGATCACATCGTTGAGTACACGCTCTCGACTCGTGACTCGACGACTTCGACTACGGTCACAGAGAAGATCGTTGAAGACAAGAACTTCAACCTGAAGACTGAACGCATCGTTCGTGACGACACACAGGACATCAAGATCGCTGTTCAAGCACGTACTGTCGACTCCTACACGAGCCCTCTATTCGAACTGAACAAGTGCTACGGCATGCTCATCGGCAACGTCGTAAACAACATGGGTCTTGTCCGTCGGAACTTCCTGATCGTCTCCGGTGGTTCTGGTTACACTTCGAACTCGGTCATCACGTTCACTGGAGGTGGCGGATCTGGTGCAGTCTACAAGCCTGTCGTCTCTGGCGGTAAGATCGTAGATCTCATCGAAGTGAACCAAGGTTCTGGCTACACGTCAGCTCCTACGATCGCAGTCTCTGGTGGTACTGGTGCGAACATCGTGTTCTCCGGCTTCGAAACGAGTCCAATCGACGGTAACGCTGATGCTCGATACGTGTCCAAGGTCGTCACTCTCCAAGACGACTACGATGCTGACAGAGCTGACGTCTACCTCGATATCAGTGCTCCCTCTGGCACTGACGTGAAGATCTACTACAGGTGCAAAAATAACTCTGACGAACAAGCCATCTCCGCAAAGAATTGGGTAGAGGTCGTCAAGAACAATCGGAAGACTTCGGTCACGGACGAGTTCATCGAAACGAAGTACGAAATCGATCTCACATACACCGGAAGCAACGGAGCTGTCTATGACGCTTCCAATTCGGTCCAAGTGAAAATCGTTCTTCTTGCTTCGAACACTTCGATCGTTCCTAAGTGCAAGAACTTCCGACTGATCACATCAGTTTGA

Genome Context

Genome Context

Tertiary structure

PDB ID
a0ba4a16a18af13c600b812b2d1ff0a6e40139c10c09ee84712389b4411bf0ff
ColabFold
Source ColabFold
Method ColabFold
Resolution 0,8011
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50

Literature

Title Authors Date PMID Source
Sinorhizobium meliloti Phage PhiM9 Defines a New Group of T4 Superfamily Phages with Unusual Genomic Features but a Common T=16 Capsid Johnson,M.C., Tatum,K.B., Lynn,J.S., Brewer,T.E., Lu,S., Washburn,B.K., Stroupe,M.E. and Jones,K.M. 2015 26311868 GenBank