Protein

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Genbank accession
XFC53230.1 [GenBank]
Protein name
hypothetical protein
RBP type
TSP
Evidence DepoScope
Probability 1,00
TF
Evidence RBPdetect
Probability 0,86
TF
Evidence RBPdetect2
Probability 0,93
Protein sequence
MADLKAGTTVGGNTIWSQANLPLLPSGNTITYKGFKIYTENDKPTKAEIGLGNVTNDAQVKKAGDTMQGTLELQGSATELKLPFRIAMVRATEPYLVATRTDNNPVTNGFPSAETRTFVIHSKTTSPTSDPNAGANLVDLICTQRPAGGGAYYIRAFGAPNTTTGAAGAVRAELQMLGDNGLVSLTGTQFNIGMQTVVSGTIFGTQMSIKGDGTRNLYFQDAGGNELGLVYADTGKNVYVRTGGGAYATRFAYDGTLFLANHLTVPGQATFNGLGVFNNRASVGVNYDSQGINSAILRVETNGDGNGVGDGVTHLGYKDGNGRYNHYFRGTGSTSINTKLGLNVNVPSYYNDVPQGTPAQYFLPTVGQGGKNYLRQFRGGNADTIWHETVQGGVWRLATGTTDAQEELQVSTAGYVRARAEVQSTSSSSGGQFRAVQGNYGFFIRNDGGSTYFMLTNSGDPYGSWNGLRPLTINNGTGQVSIGTPLVVTHYSGLTVTSTAGDAISWGNAGAALANDGNLKGTRWKSFGGSEWAGDALNWVHSNNLSLGGGTMTGTLTMNANINMQEVENRGISLGNGSGTGIFQGRDAADNDYANIEIRSWFGVGFKNTYNSGAAYYNKNTIFMNLRDGTMQAYNVYIRSDKAYKENLKKIESATDKVNQINGYTYNIKDSNDKTRTVGVIAQEVEKILPEAVTMNDEGKRQVNYNGLIALLVNSVNELTARVKELEAK
Physico‐chemical
properties
protein length:729 AA
molecular weight: 77724,19680 Da
isoelectric point:7,67346
aromaticity:0,09053
hydropathy:-0,38711

Domains

Domains [InterPro]
DC_0932
STR
1–723
DC_0932
IPR048390
ATT
411–473
IPR048390 IPR005601 IPR030392
IPR030392
CHP
640–694
IPR030392 Coil
XFC53230.1
1 729
Architecture
STR
ATT
STR
STR 1-410 | ATT 411-473 | STR 474-729
Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Tail Spike Domain Segmentation

Tail Spike Domain Segmentation

This protein has been segmented into three structural domains: N-terminal, central domain, and C-terminal.

Domain Layout
N-terminal
Central
C-terminal
XFC53230.1
1 729
Domain Start End Length (AA) Confidence
N-terminal 1 459 459 0,1222
Central domain 460 658 200 0,2267
C-terminal 659 729 70 0,9973
Legend: N-terminal Central domain C-terminal
3D Structure with Domain Coloring

The structure is colored according to the domain segmentation: N-terminal (blue), Central (green), C-terminal (pink).

Domain Coloring
N-terminal
1-459
Central
460-658
C-terminal
659-729

Taxonomy

  Name Taxonomy ID Lineage
Phage Enterobacter phage Nando
[NCBI] 		3239071 Viruses > Duplodnaviria > Heunggongvirae > Uroviricota > Caudoviricetes
Host Enterobacter cloacae complex
[NCBI] 		354276 Pseudomonadota > Gammaproteobacteria > Enterobacterales > Enterobacteriaceae > Enterobacter >

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
XFC53230.1 [NCBI]
Genbank nucleotide accession
PQ096438 [NCBI]
CDS location
range 170185 -> 172374
strand +
CDS
ATGGCAGATTTAAAAGCGGGTACTACCGTTGGCGGTAATACTATCTGGAGTCAGGCGAACTTGCCTTTGCTCCCTTCTGGAAACACAATCACATATAAAGGCTTTAAAATCTACACCGAAAACGATAAGCCAACAAAGGCAGAAATCGGATTAGGCAACGTAACGAACGATGCACAGGTGAAGAAAGCTGGTGATACAATGCAAGGAACTTTGGAATTACAAGGTTCTGCAACTGAATTGAAATTACCATTCAGGATCGCAATGGTTAGGGCAACAGAACCGTATCTCGTTGCAACTCGCACAGACAATAACCCAGTAACAAACGGGTTTCCTAGCGCAGAAACACGCACATTTGTTATACATTCAAAAACCACGTCACCAACGTCAGATCCAAACGCGGGGGCAAATCTTGTTGATCTGATTTGTACCCAACGCCCTGCGGGTGGTGGTGCTTATTATATCCGTGCTTTTGGCGCACCAAACACGACAACTGGTGCTGCTGGGGCTGTCCGTGCTGAATTGCAAATGCTGGGTGATAATGGTCTTGTCAGTTTAACAGGGACGCAATTCAACATCGGGATGCAAACCGTTGTTAGCGGTACGATCTTTGGTACGCAAATGTCTATCAAAGGTGATGGAACTAGAAACCTATACTTCCAGGATGCTGGAGGTAATGAACTGGGTTTGGTCTACGCCGATACCGGAAAGAACGTATATGTTCGTACTGGTGGTGGTGCATATGCAACTCGTTTTGCATATGATGGAACTTTATTTCTCGCTAACCATCTAACCGTTCCTGGACAGGCTACATTTAATGGTCTGGGTGTATTCAATAACCGTGCTTCTGTAGGCGTAAATTATGATTCGCAAGGAATAAACTCAGCGATTCTTCGTGTTGAAACAAACGGTGATGGAAACGGGGTTGGTGATGGTGTTACCCACTTAGGCTATAAAGACGGCAACGGACGATATAACCATTATTTCCGTGGTACTGGTTCGACTTCTATCAACACCAAATTGGGGCTTAACGTAAACGTACCATCGTATTATAACGACGTTCCACAGGGCACACCAGCGCAATATTTCTTACCTACTGTTGGACAGGGCGGGAAAAACTATTTGCGTCAGTTCCGAGGCGGTAACGCGGACACAATCTGGCATGAAACTGTTCAGGGTGGTGTGTGGAGACTGGCAACAGGTACTACCGACGCACAGGAAGAACTACAGGTTTCGACTGCTGGTTATGTTCGCGCCCGTGCGGAGGTTCAAAGTACATCGAGTAGTTCAGGCGGACAATTCCGCGCTGTTCAAGGTAACTATGGATTCTTTATCCGAAACGATGGCGGTAGTACTTATTTCATGTTGACTAATTCGGGAGATCCGTATGGTAGTTGGAACGGCCTTCGTCCATTAACAATAAATAACGGAACAGGCCAAGTTTCTATAGGCACTCCTTTAGTTGTAACTCATTATTCAGGTCTCACGGTTACTAGTACAGCAGGTGATGCTATTTCTTGGGGTAACGCAGGCGCTGCCCTGGCAAATGACGGTAACTTAAAGGGAACGCGCTGGAAATCTTTTGGTGGTTCTGAATGGGCGGGCGATGCTTTAAACTGGGTTCATTCAAATAATCTCAGTCTTGGTGGCGGCACTATGACTGGCACATTAACCATGAACGCCAACATTAATATGCAAGAAGTTGAAAACCGTGGTATTAGCCTCGGCAACGGTTCTGGTACAGGTATTTTCCAAGGCCGAGACGCCGCCGATAATGATTACGCTAATATCGAAATTCGTTCTTGGTTTGGTGTAGGCTTTAAAAACACTTATAACTCTGGTGCAGCGTATTATAACAAAAACACCATCTTCATGAACCTTCGTGACGGTACAATGCAGGCTTATAACGTTTATATCCGTTCGGATAAAGCTTATAAGGAAAATCTTAAAAAAATTGAATCTGCTACTGATAAAGTTAATCAAATTAATGGTTATACTTATAACATCAAAGATTCAAATGATAAGACACGTACTGTCGGTGTTATTGCTCAAGAAGTTGAAAAAATTCTTCCGGAAGCAGTAACTATGAACGATGAAGGTAAACGTCAAGTTAACTATAACGGTCTAATTGCTCTCCTTGTCAACTCAGTGAATGAACTGACTGCTCGGGTTAAAGAATTAGAGGCTAAATGA

Genome Context

Genome Context

Tertiary structure

PDB ID
b6092e323fe02cb11d8ca03722c58cbcdab7bddddd4259fb4f6f11f40a40f7c6
ESMFold
Source ESMFold
Method ESMFold
Resolution 0,5714
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50

Literature

Title Authors Date PMID Source
Rational Design of Frontline Institutional Phage Cocktail for the Treatment of Nosocomial Enterobacter cloacae Complex Infections Subedi,D. and Barr,J. 2024-07-01 — GenBank