Protein

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Genbank accession
ADO98208.1 [GenBank]
Protein name
tail sheath monomer
RBP type
TSP
Evidence DepoScope
Probability 1,00
Protein sequence
MALNLVSPGVKVREVDLTVGRIDGLADQVGAIAGPFAKGPVNEPVLIETEADLLATFGKPYTADGQYEYWMTASAFLSYGGVLRVLRSSNSTLSNANVPVGAAVTNLQIKSQEDYYNNYTQPTTWHYAARSPGSWANDLKICTIDGAADQRIAIGTEGLSVGFAVTAAFSSQVANTDGTVGVQTGYLKGLITDINVGSIDVKVVAKHNVSNDTWTKAGYEEGSDTNAFQGYSLSIFTANENADATVNHANRLKIFNNSGQSVSIERTQFQANIGIGSTTIEFGADLNTLKTAPGDTIRSLNGTYSGTIVSYATTGGVAQIIMDTAATVAFANTAFQVMSGIDSGIYLREGNSVVDWYDQQTLGLTNQTIFWSQIAERPTTSEFAKDRSGENDEVHVVVVDDTGKVTGTSGNIVEKWTGLSKATDAKVSPSTNIYYKDYVAQFSNYAFVGVAQTGLGLKNTSLSGYTVDSSGVWGQPAQGVVFNGSGPKTFSLTNGNDYGGIGKFDCTLGEVVNSYTVLDNPAEYAVNFLIQGPSSGASIYEAQAKANKLLSIASVRKDCVACISPYREGVVGVTNTDQQTANIVQFYDSLQSTSYGVFDSGYKYTFDRFNNTFRYIPLNGDIAGLMARTSINSFPWFSPAGAARGTINNAIKLAYNPSQAQRDTIYPKRINPVIFSPGSGIVLFGDRTAQKQASAFDRINVRRLFLTIEGTIERAARSQLFEFNDELTRSNFLNIVEPYLRDVKSKRGISDFVVICDETNNTPDVIDSNTFKADIFVKPARSINFIGLTFVATRTGISFDEVVGSA
Physico‐chemical
properties
protein length:806 AA
molecular weight: 86637,36670 Da
isoelectric point:4,99390
aromaticity:0,10174
hydropathy:-0,13759

Domains

Domains [InterPro]
G3DSA:3.40.50.11780
STR
26–146
G3DSA:3.40.50.11780 G3DSA:3.40.50.11780 IPR020287
DC_1098
STR
131–472
DC_1098 IPR035089
G3DSA:3.40.50.11780
STR
443–660
G3DSA:3.40.50.11780
IPR052042
Unmapped
579–790
IPR052042
ADO98208.1
1 806
Architecture
STR
TAS
TAS
STR 26-660 | TAS 661-689 | TAS 693-792 |
Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Tail Spike Domain Segmentation

Tail Spike Domain Segmentation

This protein has been segmented into three structural domains: N-terminal, central domain, and C-terminal.

Domain Layout
N-terminal
Central
C-terminal
ADO98208.1
1 806
Domain Start End Length (AA) Confidence
N-terminal 1 136 136 0,7449
Central domain 137 355 220 0,6796
C-terminal 356 806 450 0,3056
Legend: N-terminal Central domain C-terminal
3D Structure with Domain Coloring

The structure is colored according to the domain segmentation: N-terminal (blue), Central (green), C-terminal (pink).

Domain Coloring
N-terminal
1-136
Central
137-355
C-terminal
356-806

Taxonomy

  Name Taxonomy ID Lineage
Phage Synechococcus phage S-SSM7
[NCBI] 		445686 Uroviricota > Caudoviricetes > Pantevenvirales > Lipsvirus > Lipsvirus ssm7
Host Synechococcus sp. WH 8109
[NCBI] 		166314 Bacteria > Cyanobacteria > Oscillatoriophycideae > Chroococcales > Synechococcus >

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
ADO98208.1 [NCBI]
Genbank nucleotide accession
GU071098 [NCBI]
CDS location
range 120738 -> 123158
strand +
CDS
ATGGCGCTTAATCTAGTATCTCCAGGCGTTAAGGTAAGAGAGGTTGACTTAACTGTAGGAAGGATTGACGGCCTTGCCGATCAGGTGGGTGCTATTGCAGGACCTTTCGCAAAAGGACCTGTCAACGAACCAGTATTGATCGAGACAGAAGCTGACTTACTTGCAACGTTTGGTAAACCCTATACCGCTGACGGACAATATGAATACTGGATGACTGCATCCGCGTTCTTGTCATACGGTGGAGTTCTTAGAGTTCTAAGAAGTAGCAACAGCACACTTTCCAACGCTAACGTGCCTGTTGGTGCTGCAGTTACTAACTTACAAATCAAGTCTCAAGAAGACTACTATAATAACTACACTCAACCTACAACTTGGCATTACGCTGCAAGATCACCTGGCTCTTGGGCAAATGATCTTAAGATATGTACCATTGATGGTGCCGCAGACCAGAGAATTGCAATCGGTACAGAAGGATTATCAGTTGGATTCGCTGTAACTGCTGCGTTCTCATCTCAGGTTGCAAACACAGATGGAACAGTTGGTGTTCAAACAGGTTACTTAAAAGGTCTTATTACTGATATCAATGTTGGTTCTATTGATGTCAAAGTTGTTGCGAAACACAACGTTTCTAATGACACTTGGACTAAAGCTGGTTACGAAGAAGGATCTGACACTAATGCTTTCCAAGGATATAGTTTGTCTATCTTTACTGCAAACGAAAATGCTGATGCAACAGTTAATCATGCAAACAGACTGAAGATCTTTAACAATTCTGGACAATCAGTTTCGATTGAAAGAACTCAATTCCAAGCAAACATCGGTATTGGTTCCACAACTATCGAATTTGGAGCAGATTTAAACACACTCAAGACTGCACCTGGCGACACAATCAGATCTCTTAACGGAACTTACTCTGGTACTATTGTTTCTTACGCAACCACTGGTGGTGTTGCACAAATCATCATGGACACTGCAGCAACTGTTGCATTTGCAAACACAGCATTCCAAGTGATGTCTGGTATTGACAGTGGTATCTACCTCAGAGAAGGTAACTCCGTTGTTGACTGGTATGATCAACAGACTCTTGGACTTACAAACCAAACTATCTTCTGGAGTCAGATTGCAGAACGTCCAACAACTTCTGAATTTGCTAAAGACAGAAGTGGTGAGAATGATGAAGTTCATGTTGTCGTTGTTGATGACACAGGTAAGGTAACAGGCACATCTGGAAACATTGTAGAGAAATGGACTGGATTATCTAAGGCAACTGATGCTAAGGTTTCTCCTTCTACAAATATCTACTACAAAGATTACGTTGCACAGTTCTCCAACTATGCTTTCGTTGGTGTTGCTCAAACTGGTCTTGGTCTCAAGAATACTTCTTTAAGTGGATACACAGTAGATAGTTCTGGTGTTTGGGGACAACCAGCACAAGGAGTTGTTTTCAACGGTTCAGGTCCTAAGACATTCTCACTTACAAACGGAAACGATTACGGTGGAATTGGTAAGTTTGATTGTACATTAGGTGAGGTTGTAAATTCTTACACAGTTCTTGACAACCCTGCTGAGTATGCAGTTAACTTCCTTATCCAAGGTCCTTCAAGTGGTGCATCCATCTATGAAGCACAGGCTAAGGCAAACAAACTGTTGAGTATTGCATCTGTCAGAAAAGACTGTGTTGCATGTATCTCTCCTTATAGAGAGGGAGTTGTTGGTGTAACTAACACTGATCAACAAACTGCAAACATCGTACAGTTCTACGATAGTTTACAATCTACATCTTATGGTGTATTTGACTCTGGTTATAAGTACACATTTGATAGATTCAATAATACATTCAGATACATTCCTCTGAATGGAGACATTGCTGGATTGATGGCAAGAACTTCGATTAACTCATTCCCTTGGTTCTCCCCCGCTGGAGCAGCTAGAGGAACAATCAACAATGCTATCAAACTTGCATACAACCCATCTCAAGCACAAAGAGATACGATTTATCCTAAGAGAATTAACCCTGTTATCTTCTCTCCTGGCTCTGGTATCGTATTGTTCGGTGACAGAACTGCTCAGAAGCAAGCTTCTGCTTTCGATAGAATCAACGTCCGTCGCTTGTTCTTAACAATCGAAGGAACTATCGAGAGAGCTGCAAGATCGCAGTTATTTGAATTCAACGATGAACTTACAAGATCTAACTTCTTAAACATTGTTGAACCTTATCTTCGTGATGTTAAGTCTAAGAGAGGTATCTCGGACTTTGTTGTCATCTGCGATGAGACAAACAACACACCTGATGTTATTGACTCTAACACATTTAAGGCAGACATATTCGTGAAGCCTGCACGTTCTATCAACTTCATTGGTCTAACCTTTGTTGCAACTAGAACAGGCATCAGCTTCGATGAAGTTGTAGGTTCCGCCTAA

Genome Context

Genome Context

Tertiary structure

PDB ID
9184529562cbda11ea3d1826393661fa93145ab775b415540ee34a29abe53abe
ESMFold
Source ESMFold
Method ESMFold
Resolution 0,6727
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50

Literature

Title Authors Date PMID Source
The Genome Sequence of Cyanophage 8109-3 Henn,M.R., Sullivan,M.S., Osburne,M.S., Levin,J., Malboeuf,C., Casali,M., Russ,C., Lennon,N., Erlich,R., Young,S.K., Koehrsen,M., Yandava,C., Zeng,Q., Alvarado,L., Anderson,S., Berlin,A., Borenstein,D., Chen,Z., Engels,R., Freedman,E., Gellesch,M., Goldberg,J., Green,L., Griggs,A., Gujja,S., Heiman,D., Hepburn,T., Howarth,C., Jen,D., Larson,L., Lewis,B., Mehta,T., Park,D., Pearson,M., Roberts,A., Ryan,E., Saif,S., Shea,T., Shenoy,N., Sisk,P., Stolte,C., Sykes,S., Walk,T., White,J., Yu,Q., Coleman,M.L., Huang,K.H., Weigele,P.R., DeFrancesco,A.S., Kern,S.E., Thompson,L.R., Fu,R., Hombeck,B., Chisholm,S.W., Haas,B., Nusbaum,C., Galagan,J. and Birren,B. 2011-09-23 — GenBank