Protein

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Genbank accession
WYW04245.1 [GenBank]
Protein name
tail fiber protein
RBP type
TF
Evidence GenBank
Probability 1,00
Protein sequence
MIFPYDLGNGLIIMKIEDPRWTNREKTRIDFDATFFRPDTLEQLKAPYTSCPNDPVDYCRALYAEALSMGPGEWRRPDVTVEDLQMELDKLMPDVVLGLASPEEIDLARTLRNQIKAMS
Physico‐chemical
properties
protein length:119 AA
molecular weight: 13695,56570 Da
isoelectric point:4,54561
aromaticity:0,08403
hydropathy:-0,39664

Domains

Domains [InterPro]

No domain annotations available.

Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Taxonomy

  Name Taxonomy ID Lineage
Phage Pseudomonas phage vB_PpuP-Kallioja
[NCBI] 		3132678 Viruses > Duplodnaviria > Heunggongvirae > Uroviricota > Caudoviricetes
Host Pseudomonas putida KT2440 and
[NCBI] 		1481724 Heterolobosea > Eutetramitea > Lyromonadida > Psalteriomonadidae > Monopylocystis >

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
WYW04245.1 [NCBI]
Genbank nucleotide accession
PP496474.1 [NCBI]
CDS location
range 37772 -> 38131
strand +
CDS
ATGATTTTCCCTTACGACCTCGGGAATGGTCTCATCATCATGAAGATCGAAGATCCCCGCTGGACCAACCGAGAGAAGACCCGTATCGACTTCGATGCGACCTTCTTCCGGCCTGACACTCTGGAGCAACTCAAGGCTCCATACACTTCCTGCCCGAATGACCCGGTGGACTACTGCCGAGCTTTGTACGCTGAGGCCCTCTCAATGGGCCCCGGCGAGTGGCGCCGTCCTGACGTAACAGTCGAGGACTTGCAGATGGAATTGGACAAGCTGATGCCTGACGTTGTGTTGGGCTTAGCGTCTCCTGAGGAGATCGACCTCGCTCGTACTCTTCGCAACCAGATCAAGGCGATGTCCTAA

Genome Context

Genome Context

Tertiary structure

PDB ID
3c14c5eb9d4512610d14b74ac25c0841adb5660edb7cb0b68a9add473ccbefda
ESMFold
Source ESMFold
Method ESMFold
Resolution 0,6742
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50

Literature

Title Authors Date PMID Source
Isolation and characterization of a phage collection against Pseudomonas putida Brauer,A., Rosendahl,S., Kangsep,A., Rikberg,R., Lewanczyk,A.C., Horak,R. and Tamman,H. — — GenBank