Protein

Genbank accession
QQO97058.1 [GenBank]
Protein name
pectate lyase
RBP type
TSP
Evidence DepoScope
Probability 1,00
TSP
Evidence RBPdetect2
Probability 0,92
Protein sequence
MKHAISIVLFFILSLGLNAQTVEGTVGSDGSLIPYNVSASADVQDGTITKAKLDASLAAEIDSKTNSSEVLNLHRTSDPTSNVKESNIINAWVKATLVDLESVSTDSYIGDLSLKATKNASGSGVVYSPNYSVEIGKEYVFSCRIKVGGGFITGSNLYLSDKSGAFTQTPIDHTITDWQLVTVTLGFTKTRTRVNFSMSAQPSGAFMLIDDMKLYENEETIKAFPNAYGFGSVSTGGRGGTVRKVTNLNDSGSGSLREAAGTANTYVVFDVAGNIELSSPISVADNVAIFGQTAFRNGGQGITLKANSTNESSLMTVSGKENFTVQYIRFRRGVTPFATAATGGQNLALANSANKAIIDHCSFGWDEDESLTIWDAQQVTVSNSIINHSLKVNAYGRVKTGKGVIIGNNAEEVSLYCNLIGNADQRNALFGGSTPPLGNFEFKNNLIHNWGTAGTYFTEGTNDFKVNIIGNKWKLGNNSILNRHALQATGNTGDLFYLEGNISAERPTDDLDEWLAIGNTTTPSVNLSTSFQQLTPFDYPLQDSPTYTIEELESTVIKQMGVSLYEDKPDYGAKQDYLNGTGSHINIPSDDGGYPVLSNFTTSILDSNSDGIEDSFATTHGITSPNQIIGSYDFGDWIFDNSIGYEAIEVYAYWLTKQ
Physico‐chemical
properties
protein length:658 AA
molecular weight: 70805,52030 Da
isoelectric point:4,72385
aromaticity:0,09422
hydropathy:-0,22310

Domains

Domains [InterPro]
G3DSA:2.60.120.260
80–213
G3DSA:2.60.120.260 IPR012334
IPR052063
216–655
IPR052063
IPR011050
220–541
IPR011050
QQO97058.1
1 658
Legend: Pfam SMART CDD TIGRFAM HAMAP SUPFAM PRINTS Gene3D PANTHER Other

Taxonomy

  Name Taxonomy ID Lineage
Phage Cellulophaga phage Nekkels_1
[NCBI] 		2745692 Viruses > Duplodnaviria > Heunggongvirae > Uroviricota > Caudoviricetes
Host No host information

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
QQO97058.1 [NCBI]
Genbank nucleotide accession
MT732443 [NCBI]
CDS location
range 33026 -> 35002
strand +
CDS
ATGAAACACGCAATTAGTATAGTATTATTTTTTATCCTTTCGTTAGGATTAAACGCTCAAACGGTTGAGGGTACAGTAGGTAGTGACGGTAGTTTAATTCCTTATAATGTTTCTGCTAGTGCGGATGTACAAGACGGAACTATTACAAAGGCTAAATTAGATGCTAGTTTAGCGGCTGAAATTGATTCTAAAACAAACTCTAGTGAGGTTTTGAATTTACACAGAACATCAGACCCAACTAGTAATGTTAAAGAGTCTAACATTATTAATGCATGGGTTAAAGCCACTTTGGTTGATTTAGAATCAGTATCTACAGACAGCTATATTGGTGATTTATCATTAAAGGCAACTAAAAACGCTTCTGGTTCGGGTGTTGTGTATTCACCTAATTATTCTGTAGAAATAGGCAAGGAGTATGTTTTTAGCTGTAGAATTAAAGTAGGAGGTGGATTTATAACTGGTAGTAATTTGTACTTATCTGATAAGTCAGGAGCATTCACACAAACACCTATAGATCACACAATTACAGATTGGCAATTAGTAACGGTAACACTTGGATTCACCAAAACAAGAACCAGAGTTAATTTCTCAATGTCAGCACAACCATCGGGAGCTTTTATGCTTATTGATGATATGAAGCTTTACGAGAATGAAGAAACTATAAAGGCATTCCCTAACGCTTATGGTTTTGGCTCAGTATCTACAGGTGGAAGAGGCGGAACAGTTAGAAAGGTTACAAACTTAAACGATAGTGGTTCGGGAAGCTTAAGAGAAGCGGCAGGAACAGCTAATACATATGTGGTTTTTGATGTTGCTGGAAACATAGAGTTAAGTAGTCCTATTTCTGTAGCTGATAATGTGGCTATTTTCGGTCAAACAGCATTTAGGAATGGAGGGCAAGGAATAACATTAAAGGCAAATTCAACAAACGAATCTAGTTTAATGACCGTAAGCGGAAAGGAAAATTTTACAGTTCAATACATAAGATTCAGAAGGGGCGTTACTCCTTTTGCTACGGCTGCTACCGGAGGTCAAAACTTAGCTTTAGCTAATTCGGCAAACAAAGCGATAATTGATCATTGCTCTTTTGGTTGGGATGAAGATGAAAGTCTTACTATTTGGGATGCGCAACAAGTTACAGTTTCAAATTCAATAATTAACCACTCTTTAAAAGTAAATGCGTATGGACGTGTAAAGACAGGCAAGGGAGTTATTATTGGAAACAATGCGGAAGAAGTTTCATTGTATTGCAATCTAATAGGTAATGCAGACCAAAGAAACGCATTATTTGGAGGTTCTACACCACCACTAGGAAACTTTGAGTTTAAAAATAACTTAATACACAATTGGGGTACAGCCGGAACATATTTTACAGAAGGAACAAACGATTTCAAAGTTAATATTATTGGAAACAAATGGAAGCTTGGGAATAACTCAATACTAAATAGGCACGCTTTACAAGCTACAGGAAATACTGGAGATTTGTTTTATTTGGAAGGTAATATTTCAGCGGAAAGACCAACGGATGATTTAGACGAATGGTTAGCTATAGGCAACACAACAACGCCTTCTGTTAATTTATCTACTTCATTCCAACAATTAACACCTTTTGACTACCCTTTACAAGATTCTCCTACATACACAATAGAAGAATTGGAAAGTACAGTTATAAAACAAATGGGAGTTAGTTTGTATGAAGATAAACCAGACTATGGAGCTAAACAAGATTACTTAAACGGAACAGGTTCTCACATAAATATACCTAGTGATGATGGTGGTTATCCTGTTTTAAGTAACTTTACAACATCAATATTAGATTCTAATAGCGACGGTATAGAAGATAGTTTCGCAACTACTCATGGAATAACATCGCCAAATCAAATAATAGGCTCTTACGACTTCGGAGATTGGATATTTGACAACTCTATAGGTTATGAAGCTATAGAAGTTTACGCTTACTGGTTAACAAAACAATAA

Gene Ontology

No Gene Ontology terms available.

Enzymatic activity

No enzymatic activity data available.

Tertiary structure

PDB ID
ce65fbb30d112080eeedbd3a4ec48dad98fb208c455ea12da3d320b40f71b4e5
ESMFold
Source ESMFold
Method ESMFold
Resolution 0,7901
Evidence 0,7901
Download PDB

Literature

Title Authors Date PMID Source
Highly diverse flavobacterial phages as mortality factor during North Sea spring blooms Bartlau,N., Wichels,A., Krohne,G., Adriaenssens,E.M., Heins,A., Fuchs,B.M., Amann,R. and Moraru,C. 2021 — GenBank