Protein

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Genbank accession
YP_010774406.1 [GenBank]
Protein name
tail fiber protein
RBP type
TF
Evidence Phold
Probability 1,00
TSP
Evidence RBPdetect
Probability 0,83
Protein sequence
MAVTISGTLKDGMQNVLPNTELEFRAKKTSAKVIVESVAHYYTSLQGTYNFPLEVGAYALYINFGSMGPQYVGDITVLVDSLNGTLENFLTIPGEDEITPEILQQVLQARLDAQVAADQAKYWSEQAAAYASAASALSRLYKTQAEAIAAIGRGEIPEGGLYTTVGVESEDLYDVWQNVGGTPTPVLDADGDQLSYPSTKAIKKVLEMVRRDPNSPDFLQLKNSKGYVAFLVAADYSIRSGSNIVISNTEIKNGIVSLAAGVINLQSYKMRYDSTLPVSLRISYKGGYYSDIVDSTGRVIGTTGDTPAPPETDDPYQIKSRNAENMAKANQITSRKVMGIASLSSQINGIIMFGQSLSTGYEGWPAISTLWNQRLNNLMLGNATRPNTRSGNSFVPVGTTQFTGLKAVVQQGSDPTHIMTASEIAALAPGASEEGESPLVGAVNYLKWLYLQHWGMLKDDDMQLVASDCGVAGRTIEQLRQNHWLRFTQCVDAHKAEADRLGKTYSVAILYFMQGEWNYTTAYGGTTDKTIYKGLMKSLKDDMISYVKSVTGQEFDPAFIIYQTGAGYTNPDDQIKIGMAQLEFANEEPGVWCAGPVYQLTDKGGHLQPNGYRAYGMYLGYTGYLACVARLDSRATQPLKYTVYGKRVVIGDFLARDFPLRFEVAYDGVTAKDYTTKGFKVVDSIGLVNLESVELVADTVLKITTSRDMVGAVSVVYAGKNDFNGNGNLTDSNPTQPMESYVYQEGTGQYPTTNIPELVNKPYSMHNWCLAHRIQAEVIQ
Physico‐chemical
properties
protein length:780 AA
molecular weight: 85261,17170 Da
isoelectric point:5,12042
aromaticity:0,09615
hydropathy:-0,22256

Domains

Domains [InterPro]
IPR013609
ATT
1–126
IPR013609 IPR036514
DC_0547
STR
72–772
DC_0547
SSF52266
STR
469–621
SSF52266
YP_010774406.1
1 780
Architecture
ATT
STR
ATT 1-126 | STR 127-772 |
Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Tail Spike Domain Segmentation

Tail Spike Domain Segmentation

This protein has been segmented into three structural domains: N-terminal, central domain, and C-terminal.

Domain Layout
N-terminal
Central
C-terminal
YP_010774406.1
1 780
Domain Start End Length (AA) Confidence
N-terminal 1 613 613 0,6930
Central domain 614 769 157 0,4915
C-terminal 770 780 10 0,7161
Legend: N-terminal Central domain C-terminal
3D Structure with Domain Coloring

The structure is colored according to the domain segmentation: N-terminal (blue), Central (green), C-terminal (pink).

Domain Coloring
N-terminal
1-613
Central
614-769
C-terminal
770-780

Taxonomy

  Name Taxonomy ID Lineage
Phage Serratia phage Serbin
[NCBI] 		2562181 Uroviricota > Caudoviricetes > Serbinvirus >
Host Serratia marcescens
[NCBI] 		615 cellular organisms > Bacteria > Pseudomonadati > Pseudomonadota > Gammaproteobacteria > Enterobacterales

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
YP_010774406.1 [NCBI]
Genbank nucleotide accession
NC_074756.1 [NCBI]
CDS location
range 18330 -> 20672
strand +
CDS
ATGGCCGTTACTATATCGGGAACCCTCAAAGACGGGATGCAGAATGTTCTTCCCAACACTGAACTTGAGTTCAGGGCTAAGAAGACCTCTGCTAAGGTCATCGTGGAGTCTGTCGCTCACTATTACACCTCTCTTCAGGGAACATACAACTTCCCCCTCGAAGTGGGTGCCTACGCGCTCTATATCAACTTCGGGAGTATGGGGCCTCAGTATGTCGGGGACATCACCGTCTTGGTGGACTCTCTTAATGGAACCCTGGAGAACTTCCTGACCATTCCGGGGGAGGACGAGATTACCCCGGAGATTCTTCAACAAGTTCTGCAGGCTCGGCTGGATGCTCAGGTGGCAGCTGACCAAGCTAAGTATTGGTCAGAACAGGCCGCAGCATATGCGAGCGCAGCCTCAGCCCTATCCCGATTATACAAGACCCAGGCTGAAGCTATTGCGGCCATCGGTCGGGGGGAGATTCCGGAGGGGGGCCTATATACCACCGTTGGAGTAGAGTCGGAGGACCTCTACGACGTGTGGCAGAATGTGGGAGGAACTCCAACCCCCGTTCTGGATGCTGATGGAGACCAGCTCTCCTATCCAAGCACTAAGGCTATTAAGAAGGTTTTGGAGATGGTTCGCCGAGACCCCAACTCCCCGGACTTTCTTCAGCTGAAAAACTCAAAGGGATATGTAGCTTTCCTGGTAGCTGCTGATTATTCCATCCGGTCTGGCTCTAATATTGTAATCAGTAATACCGAGATAAAGAATGGGATCGTGAGTCTGGCCGCCGGGGTGATTAACTTACAGTCCTATAAGATGAGGTACGACTCCACCCTTCCGGTCAGCCTTAGGATTAGTTATAAGGGGGGTTACTACTCAGACATTGTGGACTCAACAGGTAGGGTGATAGGTACTACTGGAGACACCCCCGCTCCCCCAGAAACGGATGACCCCTATCAGATAAAGTCCAGAAATGCCGAGAACATGGCTAAGGCCAACCAGATTACCTCAAGAAAGGTGATGGGGATTGCCTCTCTCTCCTCCCAGATTAATGGGATAATCATGTTTGGACAATCCCTATCCACTGGGTACGAGGGGTGGCCGGCTATCTCCACCCTGTGGAACCAACGTCTTAACAACCTTATGCTGGGTAATGCGACCAGACCCAACACCCGGTCGGGAAACTCCTTTGTTCCTGTTGGGACTACCCAGTTTACTGGATTAAAGGCCGTAGTACAACAGGGGTCAGACCCCACCCACATCATGACCGCCTCGGAAATTGCTGCTTTGGCTCCCGGAGCTTCGGAAGAGGGTGAGAGTCCCCTGGTCGGGGCTGTAAACTACCTGAAATGGCTGTACCTTCAACACTGGGGAATGCTCAAGGACGACGACATGCAGCTGGTGGCTTCGGATTGCGGTGTGGCCGGTAGGACGATAGAGCAGCTCCGTCAAAACCACTGGCTCCGGTTCACCCAATGCGTTGATGCACACAAGGCTGAGGCTGATAGGCTGGGCAAGACCTATTCTGTGGCCATTCTCTACTTCATGCAGGGGGAGTGGAACTATACCACTGCCTATGGGGGTACTACGGACAAGACTATCTATAAGGGGTTGATGAAGTCCTTGAAGGATGATATGATATCCTATGTCAAGTCCGTTACGGGTCAGGAGTTTGACCCGGCGTTTATTATCTACCAGACGGGGGCGGGATATACCAACCCGGATGACCAAATTAAAATTGGTATGGCCCAGCTTGAGTTTGCCAATGAAGAGCCGGGGGTATGGTGTGCCGGTCCTGTTTATCAGTTGACGGATAAAGGGGGCCATCTGCAGCCTAACGGCTACCGAGCATACGGCATGTATCTCGGCTATACTGGTTACCTGGCCTGTGTGGCCCGTTTGGACTCCAGAGCAACTCAGCCCCTGAAGTATACCGTCTACGGTAAGCGGGTGGTGATAGGGGATTTCCTGGCACGTGATTTTCCTTTAAGGTTTGAGGTGGCCTACGACGGGGTTACTGCTAAGGACTACACCACCAAGGGATTCAAGGTGGTGGACAGTATTGGCCTGGTTAATCTGGAGTCGGTGGAATTAGTAGCTGATACTGTGCTTAAGATTACCACCTCCAGGGATATGGTGGGGGCGGTCTCAGTAGTGTACGCGGGTAAAAATGACTTCAATGGGAATGGTAATCTCACCGATAGTAATCCAACCCAGCCAATGGAGTCCTACGTATATCAGGAAGGAACGGGTCAATACCCAACTACCAATATTCCTGAGTTAGTTAATAAACCATACTCCATGCACAACTGGTGCTTGGCCCACAGGATTCAAGCGGAGGTAATACAATGA

Genome Context

Genome Context

Tertiary structure

PDB ID
29f2401492887e0eaf9e962ea2b68bf01b5bb75c0392b6f9709d7bd8ed29fb5c
ESMFold
Source ESMFold
Method ESMFold
Resolution 0,8186
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50