Protein

View in Explore
Genbank accession
QHR67842.1 [GenBank]
Protein name
tail fiber protein
RBP type
TF
Evidence Phold
Probability 1,00
TF
Evidence RBPdetect
Probability 0,89
Protein sequence
MGVFTPLTGNDAFYLFNINTTAQSANLWLDPNAGVSQVLRSTSSSRYKSSVESVIDEYADLMLEMRPVWYRSTCESDRKDWGWYGLIAEEVGEIAPEYVHWRPLQEGEDPAIASSNGMVAEGVMYERLTVPLIHHVKKLKAENDEMRKEIDELKAVVAALVNKPTTLD
Physico‐chemical
properties
protein length:168 AA
molecular weight: 18927,15190 Da
isoelectric point:4,76796
aromaticity:0,08929
hydropathy:-0,32143

Domains

Domains [InterPro]
DC_0536
STR
2–168
DC_0536
IPR030392
CHP
43–150
IPR030392
IPR030392
CHP
43–99
IPR030392 Coil
QHR67842.1
1 168
Architecture
STR
STR 2-168
Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Taxonomy

  Name Taxonomy ID Lineage
Phage Escherichia phage orkinos
[NCBI] 		2696437 Uroviricota > Caudoviricetes > Drexlerviridae > Warwickvirus > Warwickvirus orkinos
Host Escherichia coli K-12
[NCBI] 		83333 Bacteria > Proteobacteria > Gammaproteobacteria > Enterobacteriales > Enterobacteriaceae > Escherichia

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
QHR67842.1 [NCBI]
Genbank nucleotide accession
MN850586.1 [NCBI]
CDS location
range 26075 -> 26581
strand -
CDS
GTGGGAGTTTTTACCCCCCTAACTGGTAACGATGCATTTTATTTATTTAATATTAACACAACCGCTCAATCAGCAAACTTATGGCTTGATCCAAATGCTGGAGTGTCGCAAGTTTTACGCTCCACTTCCTCTTCTCGTTATAAGAGCAGCGTAGAATCGGTTATTGATGAATATGCGGATCTGATGCTTGAAATGCGTCCTGTGTGGTATCGGTCAACCTGTGAAAGCGACCGTAAAGATTGGGGATGGTACGGGCTAATCGCGGAAGAGGTTGGAGAAATTGCGCCGGAGTACGTTCACTGGCGACCGCTGCAAGAAGGAGAAGATCCTGCCATTGCTTCAAGTAATGGCATGGTGGCGGAAGGCGTTATGTATGAGCGCCTCACTGTTCCACTGATTCACCACGTTAAGAAACTGAAAGCGGAAAACGATGAGATGAGAAAAGAAATTGACGAGCTAAAAGCGGTTGTAGCGGCACTGGTAAACAAACCAACCACGTTAGACTAA

Genome Context

Genome Context

Tertiary structure

PDB ID
208c8085f39beebd7150c063ba8a6ed8876122212d4c07c99ca0f8973eb318a3
ESMFold
Source ESMFold
Method ESMFold
Resolution 0,8093
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50

Literature

Title Authors Date PMID Source
Exploring the Remarkable Diversity of Culturable Escherichia coli Phages in the Danish Wastewater Environment Olsen,N.S., Forero-Junco,L., Kot,W. and Hansen,L.H. 2020 — GenBank