Protein

Genbank accession
AGH31525.1 [GenBank]
Protein name
hypothetical protein
RBP type
TSP
Evidence DepoScope
Probability 1,00
TSP
Evidence RBPdetect
Probability 0,91
TSP
Evidence RBPdetect2
Probability 0,94
TF
Evidence GenBank
Probability 1,00
TF
Evidence Phold
Probability 1,00
Protein sequence
MATPIRIRRSPVPAKVPTNSDLLFAELGLNTFDGRVFLKQDQGKLGISTRVIEVGAGSVLGKTIFVTATGNDENSGLNEIDSKATIKGAAAISLPGDTIKVYPGIYVEDNPIILDRSVSLEGTELRNCIVTPKNVDRDLFYVNNSVHVTDMSFRLDDGRDMTDGAAVLSFEPLVGVTSDRFFDAARMIRYNLDYIANETVGYLTSTDYKNPAISIDSTNCADDIKDVYRAICHDITRGGNSKCIDAGKKYFDINGNLDHIVGFGSTTIDAFNYSIGIARSCVNNILWTGNYQSEFSQLRDLSIQADGATGSNSDYGSCANVHSAIFTCVGIVTNIIQNGIDGNPSTTGLTTNYPGNAGVGFTGTIGVTSALYNERTGNLYLEAPGISVVKGDRFEIRDLIFSCDSGAGIGTTTQFFPSGKYGNEFYVDRVNADESFVVNVGTSTLPHTYVSGGFIVDRSVAITTASYDNVSGIITFTSPGAKLKVNEFITLRDLIFSCDSGAGIGTTTQEFPSGKNGYDFKVLTGAGNTFSVNVGTSTLPHTYVSDGIVRPPYSPGVGPITQGPYVRNCTNFIPKSIGMRINGFDAEPADQEDIGVTGSMSVDSFTQFNQGGIGVSITNGAYAQLVSIFTICDQIAIYTNDGGQCDLTNSNASFGTFGLYSEGVGDETSKSIYRYTGIANTESLIENDVLVVSGLGQQRPYDGQALYFGELFYFVKGLKVTNPGSGYTKPPRLTIDSPSGPQGATAEGSSNIDSSGQVTSIDIIADGSQYRLTDNTQVVIDGPTGAGTTATAEVELFPIYYSIESATKPSAGISTIILNQRLNNTIGAGTTIFFSRVSLQITSSHSFEWVGSGNTINPAKPALGGVVIPENEVIEVGGGQVVYTSTDQAGNFRIGDGLVANQLTGTISGRSFDQSIINKVNPLIIALG
Physico‐chemical
properties
protein length:928 AA
molecular weight: 98394,32760 Da
isoelectric point:4,61614
aromaticity:0,08836
hydropathy:-0,07123

Domains

Domains [InterPro]

No domain annotations available.

Legend: Pfam SMART CDD TIGRFAM HAMAP SUPFAM PRINTS Gene3D PANTHER Other

Taxonomy

  Name Taxonomy ID Lineage
Phage Synechococcus phage S-SKS1
[NCBI] 		754042 Viruses > Duplodnaviria > Heunggongvirae > Uroviricota > Caudoviricetes
Host Synechococcus sp. WH 7803
[NCBI] 		32051 Bacteria > Cyanobacteria > Oscillatoriophycideae > Chroococcales > Synechococcus >

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
AGH31525.1 [NCBI]
Genbank nucleotide accession
HQ633071 [NCBI]
CDS location
range 15531 -> 18317
strand -
CDS
ATGGCAACACCCATTAGAATCAGAAGGTCTCCAGTTCCCGCAAAAGTCCCGACAAATAGTGATTTACTTTTTGCTGAATTGGGTCTTAATACTTTTGATGGAAGAGTATTCTTAAAGCAAGATCAAGGTAAGTTAGGAATTAGCACTCGTGTTATTGAAGTAGGTGCTGGTTCTGTTTTAGGGAAGACTATTTTTGTTACTGCTACTGGTAATGATGAAAATAGTGGATTGAATGAGATTGATTCCAAGGCAACTATTAAAGGTGCCGCTGCTATTTCACTTCCTGGTGATACGATTAAAGTTTATCCTGGTATCTATGTCGAAGATAATCCAATCATTCTTGATAGGAGTGTTTCATTAGAGGGAACAGAACTTCGTAACTGTATTGTAACACCAAAGAATGTTGATAGAGATTTATTTTATGTAAACAATAGTGTTCATGTCACTGACATGAGTTTTAGATTGGATGATGGTCGTGATATGACCGATGGAGCAGCAGTGCTTTCTTTTGAACCATTAGTTGGTGTAACATCAGATAGATTTTTTGATGCCGCAAGAATGATTCGTTATAATTTAGATTATATTGCGAATGAAACGGTAGGATATCTTACAAGCACAGATTATAAAAATCCTGCCATTAGTATTGACTCAACTAATTGTGCCGATGATATTAAAGATGTTTATCGTGCAATTTGTCATGACATAACAAGAGGTGGAAATTCTAAGTGTATCGATGCAGGTAAAAAGTATTTTGATATTAATGGAAACTTAGATCATATTGTAGGATTTGGTTCTACTACAATTGATGCATTCAATTATTCTATTGGTATTGCTCGTTCCTGTGTTAATAATATTTTATGGACTGGAAATTATCAATCAGAATTTTCTCAACTTAGAGATTTAAGTATACAAGCAGATGGTGCGACAGGATCAAATAGTGATTATGGTTCTTGTGCAAATGTTCATTCTGCAATTTTTACTTGTGTAGGAATTGTAACTAACATTATTCAGAATGGTATTGATGGAAATCCATCAACAACTGGATTAACAACAAATTATCCTGGTAATGCTGGAGTTGGGTTTACTGGAACCATTGGAGTTACAAGTGCATTATATAATGAGAGAACAGGTAATCTTTATCTTGAGGCACCAGGAATTTCTGTAGTTAAAGGAGATAGATTTGAGATTCGTGATTTAATATTCTCTTGTGATTCTGGAGCAGGAATTGGAACCACAACTCAATTCTTCCCTTCCGGTAAATACGGAAATGAGTTTTATGTTGATAGAGTAAATGCTGACGAATCCTTTGTTGTAAATGTTGGAACATCAACTCTTCCGCATACTTATGTTTCTGGTGGATTTATTGTTGATCGTTCTGTTGCAATAACGACAGCATCATATGATAATGTAAGTGGCATTATTACATTCACTTCACCTGGTGCTAAATTAAAAGTAAATGAATTTATTACTTTAAGAGATTTAATATTCTCTTGTGACTCTGGAGCAGGGATTGGAACAACAACTCAAGAATTTCCTTCAGGTAAAAATGGATATGACTTTAAAGTTCTGACCGGTGCCGGAAATACTTTCTCGGTGAATGTCGGAACATCAACTCTTCCACACACTTATGTTTCTGATGGTATTGTAAGACCTCCATACTCACCTGGTGTTGGACCGATCACACAAGGTCCTTATGTAAGAAACTGTACCAATTTTATTCCAAAGAGTATTGGAATGAGAATTAATGGATTTGATGCTGAACCAGCAGACCAAGAAGATATTGGTGTTACTGGTTCGATGAGTGTTGACTCATTTACTCAATTTAATCAGGGTGGAATTGGAGTTTCGATTACGAATGGTGCTTATGCTCAGTTAGTTTCTATCTTCACAATTTGTGATCAGATTGCTATTTACACAAATGATGGTGGACAATGTGATTTGACGAACTCTAATGCATCATTCGGAACTTTTGGATTATATTCTGAAGGTGTTGGTGATGAAACTTCTAAATCAATTTATCGTTATACTGGAATTGCAAATACAGAATCCTTAATTGAAAATGATGTTCTTGTCGTATCAGGTCTTGGACAACAAAGACCTTATGATGGTCAGGCACTTTATTTTGGTGAACTCTTCTACTTTGTAAAAGGACTTAAAGTTACTAATCCTGGTTCTGGGTATACAAAACCACCAAGATTAACGATTGATAGTCCAAGTGGACCACAAGGAGCTACTGCAGAAGGATCTTCAAATATTGATTCTTCGGGTCAGGTTACTTCAATTGATATTATTGCCGATGGAAGTCAGTATCGTCTTACTGATAATACTCAAGTTGTAATTGATGGGCCTACTGGAGCAGGAACAACTGCAACAGCAGAAGTAGAATTGTTTCCAATTTATTATTCTATTGAGAGTGCAACAAAACCATCTGCTGGTATTTCTACAATCATTTTAAATCAAAGATTGAATAATACTATAGGTGCAGGCACTACGATATTCTTTAGTCGTGTCAGTTTACAGATTACATCTTCTCATTCATTTGAGTGGGTCGGATCTGGTAATACAATAAATCCTGCAAAACCTGCTCTTGGTGGTGTTGTTATTCCTGAAAATGAAGTGATAGAAGTTGGAGGTGGTCAGGTTGTTTACACAAGCACTGACCAGGCAGGAAACTTCAGAATTGGTGATGGATTGGTTGCAAATCAATTAACAGGAACTATCTCTGGTAGATCGTTCGATCAGAGTATCATAAATAAAGTAAATCCCCTAATTATCGCACTAGGATAA

Gene Ontology

No Gene Ontology terms available.

Enzymatic activity

No enzymatic activity data available.

Tertiary structure

PDB ID
62e85a59bf1254ab3482bfe848a62bcba84b7f625e084ed490d4bf2cceaf5ebd
ESMFold
Source ESMFold
Method ESMFold
Resolution 0,5066
Evidence 0,5066
Download PDB

Literature

Title Authors Date PMID Source
The Genome Sequence of Synechococcus phage S-SKS1 Henn,M.R., Clokie,M., Levin,J., Malboeuf,C., Casali,M., Russ,C., Lennon,N., Chapman,S.B., Erlich,R., Young,S.K., Yandava,C., Zeng,Q., Alvarado,L., Anderson,S., Berlin,A., Chen,Z., Freedman,E., Gellesch,M., Goldberg,J., Green,L., Griggs,A., Gujja,S., Heilman,E.R., Heiman,D., Hollinger,A., Howarth,C., Larson,L., Mehta,T., Pearson,M., Roberts,A., Ryan,E., Saif,S., Shea,T., Shenoy,N., Sisk,P., Stolte,C., Sykes,S., White,J., Haas,B., Nusbaum,C. and Birren,B. 2011-09-23 — GenBank