Protein

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Genbank accession
YP_009043269.1 [GenBank]
Protein name
tail fiber protein
RBP type
TF
Evidence UniProt/TrEMBL
Probability 1,00
TSP
Evidence DepoScope
Probability 1,00
TF
Evidence RBPdetect
Probability 0,90
TF
Evidence RBPdetect2
Probability 0,96
Protein sequence
MATTPKTVRTYALDGTKKDFTIPFEYLARKFVVVTLIGATRRELILNTEYRFTTNTTITTNKAWGPADNFDLIEIRRLTSATERLVDFADGSILRAYDLNISQVQSLHIAEEARDLTADTIGVNNDGDLDARARKIVNLADGVNDGDAVNLRQQKQWAGSALNSANASAASAAASESSRQASLAQAQASAASAGQSSTYATNSQNSASNSQTSRLASEAARDASITARDLSQAWSSKAEDQVVASGLYSSYHYSRKSAASATASQTSATNSANSASFSTTEANRATTQADRAKTEADKLGNMNALGGAIREVNTTGKKVEINTGWEWNSDVIAVDGFRSRSSSSIDFNAQLNGRLGASFAGSLSVGGTTSLQNTTVAGLTVNSGAQFKNGNVQVFATNSSSNSHVWFYGPDGTSRGILYAGTDKAVRMQAGEVVCATFSPDGGTTLNNISAGNVTARATAYTQGGIENNGRVASYRNGVGANASMYANCHFMAQTDDGTAPAYGFHRGGSYALALWLNGNQLHMMDSSGTNREILNNSNLGSWMVSVGEQGVGSYAFCRSGVTATYGVDVAGGNLTYGSTGANGGSVPGTWRSRGWAGGGNHTLFQRIA
Physico‐chemical
properties
protein length:609 AA
molecular weight: 63836,97580 Da
isoelectric point:7,70387
aromaticity:0,07553
hydropathy:-0,35878

Domains

Domains [InterPro]
IPR005604
ATT
1–131
IPR005604 Coil
DC_0264
STR
1–606
DC_0264
YP_009043269.1
1 609
Architecture
ATT
STR
ATT 1-131 | STR 132-606 |
Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Tail Spike Domain Segmentation

Tail Spike Domain Segmentation

This protein has been segmented into three structural domains: N-terminal, central domain, and C-terminal.

Domain Layout
N-terminal
Central
C-terminal
YP_009043269.1
1 609
Domain Start End Length (AA) Confidence
N-terminal 1 248 248 0,8265
Central domain 249 447 200 0,5584
C-terminal 448 609 161 0,9281
Legend: N-terminal Central domain C-terminal
3D Structure with Domain Coloring

The structure is colored according to the domain segmentation: N-terminal (blue), Central (green), C-terminal (pink).

Domain Coloring
N-terminal
1-248
Central
249-447
C-terminal
448-609

Taxonomy

  Name Taxonomy ID Lineage
Phage Pseudomonas phage phiPSA2
[NCBI] 		1500756 Uroviricota > Caudoviricetes > Autographivirales > Studiervirinae > Ghunavirus
Host Pseudomonas syringae pv. actinidiae
[NCBI] 		103796 Bacteria > Proteobacteria > Gammaproteobacteria > Pseudomonadales > Pseudomonadaceae > Pseudomonas

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
YP_009043269.1 [NCBI]
Genbank nucleotide accession
NC_024362 [NCBI]
CDS location
range 34822 -> 36651
strand +
CDS
ATGGCTACTACACCAAAGACGGTGCGGACCTACGCTCTCGATGGCACCAAGAAAGACTTCACGATCCCCTTCGAGTATCTCGCTCGGAAGTTCGTTGTGGTCACCTTGATCGGTGCAACTCGACGTGAGCTGATCCTGAACACCGAGTACCGCTTCACTACCAACACGACCATCACCACGAATAAGGCATGGGGACCGGCTGATAACTTCGACCTGATCGAGATTCGCCGACTGACCTCTGCAACTGAGCGTCTGGTGGACTTCGCTGATGGTTCGATCCTTCGGGCCTACGACCTGAACATCTCGCAGGTTCAATCCCTGCACATCGCTGAGGAAGCCCGTGACCTGACCGCTGACACAATCGGCGTGAATAACGATGGTGACCTCGATGCCCGTGCCCGTAAGATCGTCAACCTCGCCGATGGCGTGAACGATGGTGATGCGGTAAACCTGCGCCAGCAGAAACAATGGGCAGGCTCTGCTCTGAACTCTGCAAACGCCAGTGCTGCCTCTGCGGCTGCCTCTGAGTCGTCCCGTCAGGCTTCCTTGGCGCAGGCCCAAGCGAGCGCTGCAAGTGCTGGTCAATCGAGCACCTATGCGACCAACTCTCAGAACTCTGCAAGCAACTCTCAGACTTCCCGTCTGGCCTCTGAGGCTGCCCGTGACGCTTCCATCACCGCCCGTGACTTGTCCCAAGCGTGGTCCTCGAAGGCTGAGGATCAGGTCGTTGCATCTGGCCTCTATTCGTCCTACCACTACAGCCGCAAGTCGGCAGCGAGTGCCACGGCAAGTCAGACCTCTGCGACCAACTCTGCGAACTCTGCGAGTTTCTCCACGACCGAGGCCAACCGGGCAACCACTCAGGCCGACCGTGCGAAGACCGAGGCTGACAAGCTGGGCAACATGAACGCGCTCGGTGGGGCGATCCGTGAAGTAAACACGACTGGCAAGAAGGTAGAGATCAACACCGGCTGGGAGTGGAATTCTGACGTAATTGCGGTAGACGGGTTCCGCTCAAGGAGTTCGTCCTCCATCGACTTCAATGCCCAGCTCAACGGGAGACTTGGCGCTTCATTCGCTGGTAGCCTTTCAGTTGGAGGTACTACCAGCCTACAGAACACCACTGTAGCCGGTCTAACAGTGAACTCTGGTGCCCAGTTCAAGAATGGTAACGTGCAGGTATTTGCCACGAACTCATCGTCTAACTCCCATGTCTGGTTCTACGGCCCTGACGGTACTTCCCGAGGAATTCTCTATGCTGGCACAGACAAAGCGGTAAGGATGCAAGCAGGGGAGGTAGTGTGCGCGACCTTCTCTCCAGATGGAGGGACCACACTAAACAACATATCTGCTGGTAATGTTACGGCCCGTGCTACTGCATATACTCAAGGTGGGATTGAGAATAACGGGCGTGTCGCGTCCTACCGCAATGGTGTGGGCGCAAATGCTTCCATGTATGCCAACTGCCACTTCATGGCTCAGACCGACGATGGCACTGCCCCAGCCTATGGGTTCCACCGTGGTGGCTCGTATGCTCTGGCTCTTTGGCTGAACGGAAATCAGTTGCACATGATGGACTCAAGTGGCACTAACCGAGAAATCCTGAACAACTCGAACTTAGGCTCTTGGATGGTCAGCGTAGGAGAGCAGGGTGTCGGCTCGTATGCGTTCTGCCGTTCCGGCGTGACTGCTACCTACGGCGTTGACGTTGCTGGTGGAAACCTGACCTACGGCTCGACTGGCGCGAACGGTGGCTCTGTCCCCGGAACTTGGCGTTCCCGTGGCTGGGCTGGCGGTGGTAACCATACCCTGTTCCAGCGTATCGCTTAA

Genome Context

Genome Context

Tertiary structure

PDB ID
cd6cf7a11d2020f10cf98f63a7371fc3621732efad7e390cb9d21bb31c1ec1d0
ESMFold
Source ESMFold
Method ESMFold
Resolution 0,6835
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50