Protein

View in Explore
Genbank accession
YP_009213094.1 [GenBank]
Protein name
tail fiber protein
RBP type
TF
Evidence GenBank
Probability 1,00
TF
Evidence Phold
Probability 1,00
TF
Evidence RBPdetect
Probability 0,90
Protein sequence
MAEQQYFTLVTDIGKAAIANASVTGEKVDFAKIKVGDGGGSSYTPNESQTALKNVVWESTLEHAQVDKDNPNWVVIQKFIPGDVGGFEIREVGLFDSKDQLLAVSSYPTTYKPEADSGTVKELLIKVILVVSNVANINLKVDPTVILATLKDLQDLDSKIDTTKTELTNSIETAKTELNNKIGDATQLETTDKTSLVGALNEVKTSVDSIETTAEKTSYNNATSNLTATNVQGAIDEVVRKIENFNEVNISIQNDMLPI
Physico‐chemical
properties
protein length:259 AA
molecular weight: 28027,05080 Da
isoelectric point:4,49974
aromaticity:0,05019
hydropathy:-0,23900

Domains

Domains [InterPro]
DC_1371
STR
1–255
DC_1371
IPR022225
ATT
3–150
IPR022225
IPR051934
Unmapped
4–160
IPR051934
YP_009213094.1
1 259
Architecture
ATT
STR
ATT 1-150 | STR 151-255 |
Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Taxonomy

  Name Taxonomy ID Lineage
Phage Clostridium phage phiCD481-1
[NCBI] 		1582153 Uroviricota > Caudoviricetes > Sherbrookevirus >
Host Clostridioides difficile
[NCBI] 		1496 cellular organisms > Bacteria > Bacillati > Bacillota > Clostridia > Peptostreptococcales

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
YP_009213094.1 [NCBI]
Genbank nucleotide accession
NC_028951.1 [NCBI]
CDS location
range 15536 -> 16315
strand +
CDS
TTGGCAGAACAACAATATTTTACTCTAGTAACTGACATTGGTAAGGCAGCAATAGCAAATGCAAGTGTTACAGGTGAAAAAGTAGATTTTGCAAAGATAAAAGTTGGAGATGGAGGAGGGAGTTCTTATACTCCAAATGAGAGTCAAACAGCACTAAAAAATGTAGTTTGGGAAAGCACACTTGAACATGCACAAGTAGATAAAGACAATCCTAACTGGGTAGTAATACAAAAATTCATACCTGGCGATGTTGGAGGATTTGAAATAAGAGAAGTTGGTCTATTCGATTCCAAAGACCAATTATTAGCGGTTTCTAGTTACCCAACAACATATAAACCTGAAGCAGATTCGGGGACTGTAAAAGAACTATTAATAAAAGTAATATTAGTTGTATCTAATGTAGCTAATATAAATCTAAAAGTAGACCCTACTGTCATTCTAGCAACTTTAAAAGATTTGCAGGACCTAGACTCTAAAATTGATACAACTAAAACAGAATTAACAAACAGTATAGAAACTGCTAAAACAGAGTTAAACAACAAAATAGGAGATGCAACACAACTTGAAACAACGGATAAAACTAGTCTTGTTGGTGCATTAAATGAGGTAAAAACTAGTGTAGATAGCATAGAAACAACAGCAGAGAAAACAAGTTATAATAATGCAACAAGCAATCTTACTGCTACGAATGTGCAAGGGGCGATTGATGAAGTTGTTAGAAAGATAGAAAATTTCAATGAGGTTAATATATCTATACAAAATGATATGTTACCTATTTAA

Genome Context

Genome Context

Tertiary structure

PDB ID
3d222f4123c825785787fbdb8ccc639713f286e62f246e8f297ce134d1857d17
ESMFold
Source ESMFold
Method ESMFold
Resolution 0,8759
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50

Literature

Title Authors Date PMID Source
Whole Genome Sequence and Molecular Characterization of Siphoviridae / Myoviridae Phage Infecting Clostridium difficile Monot,M. 2011-08-01 — GenBank