Protein

View in Explore
Genbank accession
QXV83667.1 [GenBank]
Protein name
central tail fiber J
RBP type
TF
Evidence Phold
Probability 1,00
TSP
Evidence RBPdetect
Probability 0,88
TF
Evidence RBPdetect2
Probability 0,95
Protein sequence
MAKNVISGSKGGSSKPYVPKEMEDNLISINKIKILLAVSDGECDETFSLRDLYLDDVPVMNDDGTYNYSGVSAEFRPGTQDQDYIQGFTDTSSEITVSRNLETDTPYVIAVTNKNLSAIRIKILMPTGIKQEDNGDLVGVSVTYAVDMAVDGGSYNEILSDTISGKTRSGYDRSRRIDLPAFNEQVLLRVRRVTPDSTSSKVTDLIKLQSYAEVVDAKFRYPLTGLVYVEFDSELFPNQIPRIAVKKKWKIINVPSNYDPVLREYHGAWDGTWKKAWSNNPAYILYDLITNQRYGLDQRELGIPLDKWSIYEAGQYCDQMVPDGKGGTEPRYLCDVVIQSQIEAYQLVRDICSIFRGMSFWNGESLSIVVDRPREPSYIFTNDNVVNGDFSYTFASEKSMYTQCNVTFDDEQNMYQQDVEGVFETEAALRFGYNPTSITAIGCTRRSEANRRGRWVLKTNLRSTTVNFATGLEGMIPSIGDVVAIADNFWSSALTLNLSGRVMEVSGLQVFLPFKVDARPGDFIMVNKPDGKPVKRTIANVSADGKTIELNIGFGFDVQPDTVFAIDRTDIALQQYVVTTITRGDNEDEFTYSITAVEYDPNKYDEIDYGVNIDDRPTSIVQPDVMQPPENVAVSSYSRIVQGVSVETMVVSWDKVPYASLYEVQWRKDNSNWLNVPQTANKEIEVEGIYAGVYYVRVRSVSASGSTSPWSGIVTASLTGKVGEPGKPINLTASTNEVFGIRVKWGMPEGTGDTAYIELHQSPDGTAENSSLLTLVPYPQFEYWHSTLPAGKVVWYRVRSVDRIGNVSGWSDFVRGMASDDVTDIIGDILDDIWNTEGGKEIKENAIDSANKIKDQAQSIIQNALANDTDVRIMRKENGKRKAEFRQSIQLIADETEARVTAMTQLKAEFDEEITSEVTRLDQAIATESETRATAIEELKSQIGDDIQGQLTRVEEAIANETEARVSADTALTAKFGDVESALTEKLDSWAGVNGVGAQYAMKLGLTYNGQKYSAGMVMQLSNSPQGLISQILFDAGRFAIMTSSTGGTYTLPFVVENNQVFINSLLVKEGSITNAMIGNFIQSNNYVWNQSGWRLDKNGTFENYGSTPGEGAMKMTNETISVRDANGVLRVQIGRLTGYW
Physico‐chemical
properties
protein length:1141 AA
molecular weight: 126693,33860 Da
isoelectric point:4,67992
aromaticity:0,09202
hydropathy:-0,34023

Domains

Domains [InterPro]
DC_0014
STR
1–1141
DC_0014
IPR053171
Unmapped
2–875
IPR053171 IPR015406
IPR055385
ATT
92–217
IPR055385 IPR032876 IPR036116 IPR013783
IPR013783
STR
627–719
IPR013783 IPR036116
IPR003961
STR
628–716
IPR003961 IPR003961
IPR003961
STR
628–722
IPR003961
QXV83667.1
1 1141
Architecture
STR
ATT
STR
ATT
STR
STR 1-91 | ATT 92-217 | STR 218-340 | ATT 341-491 | STR 492-1141
Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Tail Spike Domain Segmentation

Tail Spike Domain Segmentation

This protein has been segmented into three structural domains: N-terminal, central domain, and C-terminal.

Domain Layout
N-terminal
Central
C-terminal
QXV83667.1
1 1141
Domain Start End Length (AA) Confidence
N-terminal 1 506 506 0,9047
Central domain 507 1081 576 0,0468
C-terminal 1082 1141 59 0,8712
Legend: N-terminal Central domain C-terminal
3D Structure with Domain Coloring

The structure is colored according to the domain segmentation: N-terminal (blue), Central (green), C-terminal (pink).

Domain Coloring
N-terminal
1-506
Central
507-1081
C-terminal
1082-1141

Taxonomy

  Name Taxonomy ID Lineage
Phage Changchunvirus paulsarasin
[NCBI] 		3427861 Viruses > Duplodnaviria > Heunggongvirae > Uroviricota > Caudoviricetes
Host Escherichia coli K-12
[NCBI] 		83333 Bacteria > Proteobacteria > Gammaproteobacteria > Enterobacteriales > Enterobacteriaceae > Escherichia

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
QXV83667.1 [NCBI]
Genbank nucleotide accession
MZ501099.1 [NCBI]
CDS location
range 16411 -> 19836
strand +
CDS
ATGGCTAAAAATGTGATAAGCGGCAGTAAAGGCGGTTCATCAAAACCGTATGTGCCAAAGGAAATGGAAGATAACTTGATTTCTATAAACAAAATCAAGATCTTGCTTGCTGTTTCCGATGGCGAGTGCGACGAAACGTTTTCATTGCGTGACCTGTATCTTGATGATGTTCCGGTTATGAATGACGATGGCACTTATAACTATAGCGGCGTTTCGGCTGAGTTCAGGCCAGGCACTCAAGATCAAGACTACATCCAGGGGTTTACTGACACCTCAAGCGAAATAACTGTATCGCGAAATCTTGAAACAGACACGCCATATGTGATTGCAGTAACCAACAAAAACCTATCTGCGATCAGAATAAAAATCCTTATGCCTACTGGTATAAAGCAAGAGGATAACGGCGATCTCGTTGGTGTAAGCGTAACATATGCCGTTGATATGGCTGTTGATGGCGGCTCATACAATGAGATTTTGAGCGATACGATAAGCGGTAAAACTCGCAGCGGTTACGACAGAAGCCGTCGAATTGATTTGCCAGCTTTTAACGAGCAAGTATTGTTGCGCGTTCGCCGTGTTACTCCTGATAGCACATCGTCAAAGGTTACAGATCTGATTAAGTTGCAGAGCTACGCGGAAGTTGTAGACGCTAAATTTCGTTATCCGCTGACAGGTCTTGTTTATGTGGAATTTGATTCCGAGTTATTCCCGAACCAGATCCCACGGATAGCGGTAAAAAAGAAATGGAAGATCATAAACGTTCCGAGCAATTACGATCCTGTTTTGCGTGAATACCACGGCGCGTGGGATGGAACCTGGAAAAAAGCATGGTCTAACAATCCGGCTTACATCCTATATGACTTGATAACCAATCAGCGTTACGGACTCGATCAACGTGAGTTGGGAATTCCACTTGATAAGTGGAGCATTTACGAGGCGGGGCAATATTGCGATCAGATGGTTCCAGATGGAAAGGGCGGAACAGAGCCGCGCTACCTTTGCGACGTTGTGATCCAAAGCCAGATTGAAGCGTATCAGCTTGTAAGGGATATTTGTTCAATCTTCCGTGGAATGAGTTTCTGGAACGGTGAGAGCCTTTCAATTGTCGTTGATAGACCGCGCGAGCCGTCTTACATCTTCACAAATGATAACGTTGTTAATGGTGATTTTAGCTACACGTTCGCCAGCGAAAAGAGCATGTACACACAGTGCAATGTGACTTTCGACGACGAGCAAAACATGTATCAACAGGACGTTGAAGGGGTTTTTGAAACGGAGGCGGCGTTACGTTTTGGCTACAATCCAACGAGCATTACAGCGATTGGATGCACACGACGCAGCGAAGCAAACCGCCGTGGGCGCTGGGTTCTGAAAACCAACTTGCGCAGTACAACGGTAAACTTTGCAACAGGTCTTGAGGGTATGATCCCGTCAATCGGTGATGTGGTGGCGATTGCGGATAACTTCTGGAGCAGCGCACTAACGCTCAACCTTTCGGGGCGCGTTATGGAGGTATCCGGTCTGCAAGTTTTCCTACCGTTTAAAGTCGATGCGCGGCCAGGCGATTTCATCATGGTAAATAAGCCAGATGGGAAGCCAGTAAAACGCACTATTGCCAACGTGAGTGCAGACGGAAAAACCATTGAGCTAAACATAGGTTTTGGCTTTGACGTTCAGCCCGATACGGTGTTTGCGATTGACCGCACAGACATTGCATTGCAGCAATACGTTGTGACGACAATCACCAGGGGAGATAACGAGGACGAGTTTACTTACTCAATCACAGCCGTTGAATACGATCCGAACAAATACGACGAGATTGATTATGGCGTTAACATCGACGACAGGCCAACAAGCATTGTGCAACCTGACGTAATGCAGCCGCCAGAGAATGTTGCCGTTTCCTCTTACTCTCGCATTGTTCAGGGTGTTAGCGTTGAAACGATGGTTGTTAGCTGGGACAAAGTGCCTTACGCGAGCTTATACGAGGTTCAATGGAGGAAAGACAACAGCAACTGGTTAAACGTCCCACAGACGGCAAACAAAGAGATTGAGGTGGAGGGGATTTACGCTGGAGTTTATTACGTTCGCGTGCGATCCGTTTCCGCTTCCGGTTCTACGTCGCCCTGGTCTGGAATAGTTACAGCATCGCTGACGGGTAAAGTTGGTGAGCCTGGGAAGCCTATAAACCTTACTGCATCAACAAATGAGGTTTTCGGTATTCGCGTAAAATGGGGTATGCCAGAGGGAACAGGAGACACGGCCTATATTGAGTTGCATCAATCACCAGATGGAACGGCGGAAAACTCAAGCCTTTTAACGCTTGTCCCATATCCGCAGTTTGAATACTGGCACAGCACGTTACCAGCGGGGAAAGTTGTGTGGTATCGCGTGCGCAGTGTTGACAGGATCGGCAACGTTTCCGGCTGGTCTGATTTTGTGCGCGGCATGGCTTCCGATGATGTGACAGATATCATTGGCGACATTTTAGATGATATCTGGAATACGGAGGGCGGAAAGGAAATCAAGGAAAACGCCATTGATAGCGCAAACAAGATTAAGGATCAGGCACAAAGCATCATTCAAAACGCATTGGCGAATGATACGGACGTTAGGATCATGAGGAAGGAAAACGGCAAGCGCAAAGCCGAGTTTAGGCAATCAATCCAATTGATCGCAGATGAAACGGAGGCGCGCGTTACCGCAATGACGCAACTCAAGGCTGAATTTGACGAGGAGATCACTAGCGAAGTAACGAGACTTGATCAGGCAATTGCAACAGAATCAGAAACGCGAGCAACAGCTATTGAGGAATTGAAATCACAGATTGGTGATGATATCCAGGGGCAGTTAACGCGAGTTGAGGAGGCTATTGCAAACGAAACAGAGGCGCGTGTTTCGGCTGATACGGCATTAACAGCAAAGTTTGGCGATGTTGAATCAGCGCTGACTGAAAAACTTGATTCATGGGCTGGAGTTAATGGAGTTGGCGCACAGTACGCAATGAAATTGGGATTGACCTACAACGGGCAGAAGTACAGCGCCGGAATGGTCATGCAGTTATCAAACAGCCCTCAAGGGTTGATTTCACAAATCCTGTTTGATGCCGGAAGATTTGCGATCATGACTAGTTCGACGGGCGGAACGTATACATTGCCTTTTGTGGTGGAGAATAACCAAGTTTTCATTAACAGCCTGTTAGTGAAAGAAGGATCAATCACAAACGCCATGATCGGTAACTTCATCCAATCAAACAACTACGTTTGGAACCAATCAGGATGGAGGTTGGATAAAAACGGAACGTTTGAAAACTATGGCTCCACTCCTGGCGAGGGCGCTATGAAAATGACAAACGAAACGATCAGCGTTAGGGATGCAAACGGCGTTTTGCGTGTTCAGATTGGACGTTTAACCGGATACTGGTAA

Genome Context

Genome Context

Tertiary structure

PDB ID
04357f14ebe5fbbe6d152a5e8ced9c5dad98db2e27dd630eae3354078475e97a
ColabFold
Source ColabFold
Method ColabFold
Resolution 0,3180
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50

Literature

Title Authors Date PMID Source
Systematic exploration of Escherichia coli phage-host interactions with the BASEL phage collection Maffei,E., Shaidullina,A., Burkolter,M., Heyer,Y., Estermann,F., Druelle,V., Sauer,P., Willi,L., Michaelis,S., Hilbi,H., Thaler,D.S. and Harms,A. 2021 — GenBank