Protein

View in Explore
Genbank accession
QBX26546.1 [GenBank]
Protein name
tail fiber protein
RBP type
TF
Evidence Phold
Probability 1,00
TF
Evidence RBPdetect
Probability 0,89
TF
Evidence RBPdetect2
Probability 0,80
Protein sequence
MDITIQNVRSPALEHNGRYYKVFQPRTRDELLKLHHMGCVGDTVLTDIQLEQGDFPTSFVEPTVTQRTLSGLFKDMRSIELELRDPNSTLWGKIQQNNQGALTQFFDKNVKSAIAQTAKEIRQEVRDAANSARVQVTPEGVTIGSTTLTGEQLASTISTSSKGVDIIAPKVRVKSDMIVDGAVTAGKLAAGSVTAENIQAGAITGDKISVDDALIKNLTARDALIDKLTSKEIFATKIESVVSSSTFLEAYQGKIGGFTLGQFDQGGGRWISGVNKFAVGMGNGEGYGTQTAFWANWGNNWNQAGPRAWHVDTDGQMYCKNDAHFSAETNFTGESNTNFYGTVKFTQSPIFAGNINMGNSNIFGNGYNPAGGVNKVVWWSELESVAFRKHTDIDAIKKRLNRIESHLGISSS
Physico‐chemical
properties
protein length:412 AA
molecular weight: 44816,62970 Da
isoelectric point:6,40930
aromaticity:0,08252
hydropathy:-0,34782

Domains

Domains [InterPro]
DC_0720
STR
1–409
DC_0720
IPR012892
RBD
14–130
IPR012892
QBX26546.1
1 412
Architecture
STR
STR 1-409 |
Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Taxonomy

  Name Taxonomy ID Lineage
Phage Streptococcus phage Javan330
[NCBI] 		2548110 Viruses > Duplodnaviria > Heunggongvirae > Uroviricota > Caudoviricetes
Host Streptococcus mitis
[NCBI] 		28037 cellular organisms > Bacteria > Bacillati > Bacillota > Bacilli > Lactobacillales

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
QBX26546.1 [NCBI]
Genbank nucleotide accession
MK448909.1 [NCBI]
CDS location
range 29182 -> 30420
strand +
CDS
ATGGATATTACCATTCAAAACGTTCGTTCGCCTGCTCTTGAGCATAATGGACGGTATTATAAGGTATTTCAGCCACGTACACGAGATGAACTGCTGAAGCTTCATCACATGGGTTGTGTGGGAGATACGGTGCTGACGGATATCCAATTGGAGCAAGGGGATTTTCCTACAAGTTTCGTGGAGCCTACTGTCACACAACGCACACTGTCAGGTCTCTTCAAGGATATGCGTTCTATCGAACTGGAACTAAGAGACCCAAACAGCACTCTATGGGGAAAAATCCAGCAGAATAATCAAGGGGCGCTGACTCAATTCTTTGACAAGAATGTTAAGAGTGCCATTGCTCAGACGGCTAAAGAAATCAGGCAGGAAGTGCGAGACGCTGCCAACAGTGCTAGAGTACAAGTGACGCCCGAAGGTGTGACTATCGGCTCTACTACCTTGACTGGTGAGCAGTTAGCCTCTACCATTTCGACCAGTTCGAAAGGCGTTGACATTATCGCTCCGAAAGTCAGAGTGAAATCCGACATGATTGTTGACGGTGCGGTAACTGCTGGGAAGTTAGCAGCTGGGTCTGTGACTGCTGAAAATATCCAAGCTGGGGCTATCACAGGCGATAAAATCAGCGTAGATGATGCCTTAATCAAGAATCTGACCGCTAGAGATGCCTTAATTGACAAACTGACATCTAAGGAAATCTTTGCGACTAAGATTGAATCTGTCGTATCTAGTTCAACATTCCTTGAAGCCTATCAAGGTAAAATCGGTGGCTTCACGCTTGGACAATTTGACCAAGGTGGCGGTCGCTGGATTTCTGGCGTGAATAAATTCGCAGTTGGAATGGGGAACGGAGAAGGTTATGGAACCCAAACAGCTTTCTGGGCGAATTGGGGCAACAACTGGAACCAAGCAGGGCCTAGAGCGTGGCATGTGGACACAGATGGGCAAATGTATTGTAAGAACGATGCGCATTTTTCTGCCGAAACCAATTTCACAGGCGAGAGCAATACGAATTTTTACGGAACAGTTAAATTCACTCAGTCGCCTATATTTGCAGGTAACATCAACATGGGAAATAGCAATATCTTCGGTAATGGCTATAACCCGGCTGGAGGTGTCAATAAGGTTGTTTGGTGGAGTGAACTTGAATCAGTCGCTTTCCGGAAACATACAGATATAGATGCAATCAAGAAACGCTTGAACAGAATTGAAAGCCATCTAGGAATTAGCAGTAGTTAG

Genome Context

Genome Context

Tertiary structure

PDB ID
e5dee928056b5fd539fbf9fa6546321588df8b0a94218dadce3a288d518c5b42
ESMFold
Source ESMFold
Method ESMFold
Resolution 0,5843
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50

Literature

Title Authors Date PMID Source
Prophages and satellite prophages are widespread among Streptococcus species and may play a role in pneumococcal pathogenesis Rezaei Javan,R., Ramos-Sevillano,E., Akter,A., Brown,J. and Brueggemann,A.B. 2018-12-20 — GenBank