Protein

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Genbank accession
WAX25611.1 [GenBank]
Protein name
hypothetical protein
RBP type
TSP
Evidence DepoScope
Probability 1,00
Protein sequence
MGDHCMIKNSDFGGFLVSNNVINGLRIQYTYREESSISQLNGWTIISEADDASYVSNPDNFTILGATSIAQISPVILEIFSAKYGTDLFWIYENNVHIGFYDLISDREVTIQEILEI
Physico‐chemical
properties
protein length:117 AA
molecular weight: 13191,59100 Da
isoelectric point:4,15450
aromaticity:0,11966
hydropathy:0,04444

Domains

Domains [InterPro]
IPR018689
STR
16–89
IPR018689
WAX25611.1
1 117
Architecture
STR
STR 16-89 |
Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Tail Spike Domain Segmentation

Tail Spike Domain Segmentation

This protein has been segmented into three structural domains: N-terminal, central domain, and C-terminal.

Domain Layout
N-terminal
Central
C-terminal
WAX25611.1
1 117
Domain Start End Length (AA) Confidence
N-terminal 1 10 10 0,0108
Central domain 11 106 97 0,2751
C-terminal 107 117 10 0,6095
Legend: N-terminal Central domain C-terminal
3D Structure with Domain Coloring

The structure is colored according to the domain segmentation: N-terminal (blue), Central (green), C-terminal (pink).

Domain Coloring
N-terminal
1-10
Central
11-106
C-terminal
107-117

Taxonomy

  Name Taxonomy ID Lineage
Phage Streptococcus phage YS34-rum
[NCBI] 		2989751 Viruses > Duplodnaviria > Heunggongvirae > Uroviricota > Caudoviricetes
Host Streptococcus suis
[NCBI] 		1307 cellular organisms > Bacteria > Bacillati > Bacillota > Bacilli > Lactobacillales

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
WAX25611.1 [NCBI]
Genbank nucleotide accession
OP662532 [NCBI]
CDS location
range 77712 -> 78065
strand +
CDS
ATGGGGGACCATTGTATGATAAAGAATAGTGATTTTGGAGGATTTTTAGTTTCAAACAACGTAATAAATGGTCTTCGTATACAGTACACTTATCGTGAAGAATCATCAATTAGTCAGTTGAATGGGTGGACTATTATTTCTGAAGCTGATGATGCCTCTTATGTTTCAAATCCAGATAATTTTACTATTTTAGGTGCAACAAGTATTGCTCAAATATCTCCTGTAATTTTGGAAATTTTTTCAGCAAAATATGGAACAGATTTATTCTGGATTTATGAAAATAATGTTCATATAGGCTTCTATGATTTAATCTCAGATCGTGAGGTAACGATTCAAGAAATATTGGAAATTTAG

Genome Context

Genome Context

Tertiary structure

PDB ID
25655a442cba1f258e2d1c562881fc8a545e5dfdb134deae1901668ed44a4481
ESMFold
Source ESMFold
Method ESMFold
Resolution 0,8566
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50