Protein

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Genbank accession
XXJ63730.1 [GenBank]
Protein name
tail spike protein
RBP type
TF
Evidence GenBank
Probability 1,00
TSP
Evidence DepoScope
Probability 1,00
TSP
Evidence RBPdetect
Probability 0,91
TSP
Evidence RBPdetect2
Probability 0,94
Protein sequence
MAINPDSAFPGKTAGVSPQYPFGKARDVASPGDGTGTPLKSAWLNDWFGLQQQLLSLAGIVPSGVSDEVGSCQVWDALRAILVTREESFKSVTWEGFAGGADPSGATSSVAAFKAAIESGGNIWVPAGSYFIPGEGPDSGGVLATITKSVYVTCEPGAKFFTDSLDNDFIRIEIPSNGSGLPDEGITADWDGGFFDQRNQKNSTVVPFMAEYPPANPGASATADSVSIRGFYTDGGTVKAGVKRATIRRVVTLAGEHWQSAGGDSGVFIGGAEEQLIELCYFKGNRDLGAYPSAHESGQLKCSVTVRNNIFDTCFHGVAAKRGFESIDITKNTFINCVRAAQSEFISIRNRNVGIYNNTFIGCGITARIQQSDGGFIYGNVDKDHGATLENGTIEPIVGLRGYLIESCTDIVTGPNFATPEKPAAAAAYPTQGQGITITGASSGCQQLNNSFKGWRRLGSDETIGGKNRWKGNTCPDGTAKYVVFTDIANGAEERVADQVGNAPWLRTPLLCSPSSELAPIIKSYDGSGISTAGLYFKGPDIGLAGPNVLIQGNLFPVTPNTTAIGAATSPVAGGWTQAAFTVTSDERTKTRPFEITGAMLDAVAEIEWVMFQIIGRILEKGEDNARWHVGVIAQRVKEVFEKHGVDPHDCAFFCYDKWGAKPAVTLEVPAVYDMHGLIVSEARTEIVEEAVGAGELYSIRYEELLALKIKQVERDHSRRIDALVARIEALESN
Physico‐chemical
properties
protein length:734 AA
molecular weight: 78195,72370 Da
isoelectric point:5,03249
aromaticity:0,08992
hydropathy:-0,14932

Domains

Domains [InterPro]
DC_0512
STR
1–165
DC_0512 IPR036388
IPR012334
STR
99–396
IPR012334 IPR036388
IPR011050
STR
106–485
IPR011050 cd10144 Coil
IPR030392
CHP
585–645
IPR030392
IPR030392
CHP
585–728
IPR030392
XXJ63730.1
1 734
Architecture
STR
RBD
STR 1-485 | RBD 572-734
Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Tail Spike Domain Segmentation

Tail Spike Domain Segmentation

This protein has been segmented into three structural domains: N-terminal, central domain, and C-terminal.

Domain Layout
N-terminal
Central
C-terminal
XXJ63730.1
1 734
Domain Start End Length (AA) Confidence
N-terminal 1 106 106 0,9836
Central domain 107 480 375 0,9927
C-terminal 481 734 253 0,9657
Legend: N-terminal Central domain C-terminal
3D Structure with Domain Coloring

The structure is colored according to the domain segmentation: N-terminal (blue), Central (green), C-terminal (pink).

Domain Coloring
N-terminal
1-106
Central
107-480
C-terminal
481-734

Taxonomy

  Name Taxonomy ID Lineage
Phage Aeromonas phage AerV_348
[NCBI] 		3440524 Viruses >
Host Aeromonas veronii
[NCBI] 		654 cellular organisms > Bacteria > Pseudomonadati > Pseudomonadota > Gammaproteobacteria > Aeromonadales

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
XXJ63730.1 [NCBI]
Genbank nucleotide accession
PV784690.1 [NCBI]
CDS location
range 22235 -> 24439
strand -
CDS
ATGGCGATTAACCCAGATAGTGCTTTTCCAGGAAAGACGGCCGGGGTCAGCCCGCAGTACCCGTTCGGTAAGGCGCGCGATGTAGCGTCTCCAGGTGATGGGACCGGCACTCCGCTTAAATCTGCTTGGCTTAACGATTGGTTCGGCCTTCAGCAGCAGCTATTGTCTTTGGCCGGCATTGTTCCGTCAGGGGTATCTGATGAGGTGGGGTCGTGCCAGGTATGGGACGCGCTCAGGGCCATTCTTGTTACAAGGGAAGAGTCGTTCAAGTCGGTAACTTGGGAAGGGTTTGCCGGAGGTGCAGACCCATCTGGTGCGACCTCTTCTGTCGCGGCATTTAAAGCCGCCATTGAAAGCGGTGGAAACATATGGGTTCCGGCGGGTTCATACTTTATTCCTGGCGAAGGTCCTGACTCTGGTGGCGTTTTGGCCACGATAACGAAGTCGGTGTATGTTACCTGCGAACCAGGCGCAAAGTTTTTTACTGACTCTTTAGATAACGACTTTATCAGAATTGAAATCCCGTCCAATGGATCAGGGCTTCCCGACGAGGGCATAACTGCAGATTGGGATGGCGGCTTCTTTGATCAGAGAAACCAGAAGAACTCAACTGTCGTTCCTTTCATGGCAGAGTACCCTCCAGCGAACCCCGGGGCTTCAGCGACAGCTGACTCTGTTTCTATCCGCGGTTTCTACACTGATGGAGGAACTGTAAAGGCAGGGGTGAAACGGGCAACCATACGTCGAGTTGTTACACTGGCAGGTGAACACTGGCAATCAGCAGGCGGCGATAGCGGCGTGTTCATAGGTGGTGCAGAAGAGCAGCTTATCGAACTGTGCTACTTCAAGGGTAACCGAGATCTAGGGGCCTACCCTTCTGCACACGAAAGCGGGCAGTTAAAATGCTCCGTAACTGTTAGAAATAACATTTTTGACACGTGTTTCCACGGTGTGGCCGCAAAGCGCGGTTTCGAGTCGATAGATATCACGAAGAACACTTTCATAAACTGCGTGAGAGCTGCTCAGTCAGAGTTCATCTCTATAAGAAACAGAAACGTAGGGATATACAACAACACGTTTATTGGGTGCGGTATAACTGCGAGAATCCAGCAATCTGATGGCGGATTCATCTACGGTAACGTTGACAAAGATCACGGCGCCACACTGGAAAACGGGACAATAGAGCCAATTGTTGGGTTGAGAGGGTATCTAATAGAAAGCTGCACTGATATCGTGACCGGTCCGAACTTTGCAACACCAGAGAAGCCGGCCGCAGCTGCTGCTTATCCGACCCAGGGTCAGGGCATTACTATCACCGGGGCGTCAAGTGGCTGCCAGCAATTAAACAACTCTTTCAAGGGTTGGAGGCGATTGGGTAGCGACGAGACAATAGGCGGCAAGAACCGGTGGAAGGGGAACACTTGCCCGGATGGTACCGCTAAGTATGTTGTTTTTACCGACATTGCCAACGGTGCGGAGGAGCGAGTGGCCGACCAGGTCGGGAACGCCCCGTGGTTGAGAACTCCGCTCCTATGCTCTCCGTCATCAGAGTTAGCGCCCATCATTAAAAGCTATGACGGGTCCGGCATTAGCACGGCTGGTCTATATTTTAAAGGTCCAGATATCGGCCTGGCCGGCCCGAATGTGCTTATTCAGGGTAATCTTTTCCCGGTAACCCCAAACACTACGGCTATTGGGGCGGCGACTTCTCCGGTGGCGGGTGGGTGGACTCAGGCCGCATTTACCGTTACGTCTGACGAAAGAACTAAAACCAGGCCGTTCGAGATAACGGGCGCGATGCTGGATGCTGTTGCCGAAATTGAATGGGTTATGTTCCAGATTATTGGGCGGATCCTTGAAAAGGGTGAGGACAACGCCCGGTGGCACGTTGGCGTGATAGCGCAAAGAGTCAAGGAGGTGTTTGAGAAGCACGGAGTCGATCCTCATGACTGCGCGTTCTTCTGCTACGACAAGTGGGGCGCTAAACCTGCGGTGACGCTCGAGGTCCCCGCTGTGTATGATATGCACGGGCTTATAGTGTCTGAGGCAAGGACTGAGATAGTTGAAGAGGCTGTGGGGGCTGGAGAGCTTTACAGCATCAGGTACGAAGAGCTTTTGGCCCTCAAGATTAAGCAGGTAGAGCGTGACCACAGTCGGCGGATTGACGCATTGGTGGCGAGAATTGAAGCGCTTGAAAGTAACTAA

Genome Context

Genome Context

Tertiary structure

PDB ID
b4f78eacd2439043d1d846fce304e4de6f93c22abb0c15227ca57335fc5c88b1
ColabFold
Source ColabFold
Method ColabFold
Resolution 0,8479
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50