Protein

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Genbank accession
UZV39433.1 [GenBank]
Protein name
putative tail tubular protein B
RBP type
TSP
Evidence DepoScope
Probability 1,00
Protein sequence
MAQSLEGTIQSLLQGVSQQVPRERQPGQLGAQLNMLSDPVSGIRRRPPGEIVWESTIDNPGLDSLFTEYVERGTDGRHLLINTSNGNWWLLAKNGKTIINSGNDPYFVTTVGQTSLQTASIAGLTYILNTEMAPNTTVDNTGRIDPSTTGFFYVKSAAFQKRWNVTVTSAGVDYSGDYTAPAAGSTSGNAEEVSGAYVAQQLRDSLVANGLPAGNVSVRGAYLFFYGLSNCVVSSDAGDTYAVVSNQSRVDQEQDLPAQLPAQADGAMCRVGTASSETAWYQFSYSTRTWSEVGAYGSITKITNMPRELAADDNIIARDWEGRLAGNDDNNSNPGFVENGYITGIAAFQGRLVLLSGSSVDMSASGLYQRFYRSTVTSLLDTDRISISSASAQDSVYRTAVQFNRDLVLFANSMQAVVPGSAVLTPTNASISITSTYDCDSRVTPVMAGQTVIYPNKRNDSYAGILELIPSPYTAAQYTTQDATVHLPRYIPGRVLQMQNSSVTNMAFSRMSGERNSLLVYEFMWGGSDGAKMQAAWHKWSFPYPILSVQALEDEVFLYMQGPSPSNKLLIVSMDPREGYQLGSEYREAYSDLQKQVQVQGGVFTVPAVLRPVGWADNYKEELILTYLPSNPMGPTEVGIKEIAGENTLRVVRGVPDGTYVIGRRYRSTFTLTTPILRDQNDKLVGSGHVRLLRLDVAVRNSGHFDVQVLDTPRDVNWGGELTGILMNSKELTLGQALRMDLATITVPCRTNADTTEVSLFTDGSMELNVLDISYILRYNQRRRRI
Physico‐chemical
properties
protein length:786 AA
molecular weight: 85952,27390 Da
isoelectric point:5,09837
aromaticity:0,08651
hydropathy:-0,24656

Domains

Domains [InterPro]
IPR058003
TTP
4–786
IPR058003
UZV39433.1
1 786
Architecture
TTP
TTP 4-786
Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Tail Spike Domain Segmentation

Tail Spike Domain Segmentation

This protein has been segmented into three structural domains: N-terminal, central domain, and C-terminal.

Domain Layout
N-terminal
Central
C-terminal
UZV39433.1
1 786
Domain Start End Length (AA) Confidence
N-terminal 1 146 146 0,9913
Central domain 147 345 200 0,1232
C-terminal 346 786 440 0,1064
Legend: N-terminal Central domain C-terminal
3D Structure with Domain Coloring

The structure is colored according to the domain segmentation: N-terminal (blue), Central (green), C-terminal (pink).

Domain Coloring
N-terminal
1-146
Central
147-345
C-terminal
346-786

Taxonomy

  Name Taxonomy ID Lineage
Phage Klebsiella phage vB_KpP_FBKp18
[NCBI] 		2982893 Uroviricota > Caudoviricetes > Autographivirales > Slopekvirinae > Drulisvirus
Host Klebsiella sp.
[NCBI] 		576 cellular organisms > Bacteria > Pseudomonadati > Pseudomonadota > Gammaproteobacteria > Enterobacterales

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
UZV39433.1 [NCBI]
Genbank nucleotide accession
OP441381 [NCBI]
CDS location
range 679 -> 3039
strand +
CDS
ATGGCGCAATCATTAGAAGGTACTATTCAGAGCTTGCTGCAGGGCGTTTCCCAGCAGGTTCCGAGAGAGCGCCAACCAGGACAACTGGGGGCGCAGCTGAACATGCTCAGCGACCCGGTTTCGGGTATCCGCCGCAGACCCCCGGGTGAGATTGTCTGGGAGAGCACGATTGATAATCCGGGGCTTGATTCCCTGTTCACTGAATACGTAGAGCGTGGGACTGACGGTAGGCACCTGCTGATTAACACCAGCAACGGTAACTGGTGGTTGCTGGCTAAGAATGGAAAGACCATCATTAATTCCGGCAATGACCCGTACTTTGTTACCACCGTAGGCCAGACCTCTTTGCAGACCGCAAGTATTGCCGGACTGACTTATATCCTGAATACGGAGATGGCCCCGAACACAACCGTGGACAATACTGGGCGCATCGACCCCAGCACCACCGGGTTCTTCTACGTTAAATCCGCAGCATTCCAGAAACGCTGGAACGTCACTGTTACCTCTGCAGGGGTAGACTACTCAGGGGACTACACCGCCCCAGCTGCTGGTAGCACAAGCGGCAACGCTGAGGAGGTGTCTGGTGCCTACGTTGCTCAGCAACTGCGTGACTCTCTTGTAGCGAATGGGTTGCCAGCTGGGAACGTGAGCGTACGTGGCGCGTACCTGTTCTTCTATGGGTTGAGTAACTGCGTGGTATCCTCCGACGCGGGTGATACTTACGCTGTGGTGTCCAACCAGTCTCGTGTAGACCAGGAGCAGGACCTGCCTGCACAGCTCCCGGCGCAAGCTGACGGAGCAATGTGCCGTGTAGGTACCGCCTCGTCTGAGACAGCATGGTACCAGTTCAGCTACAGCACCCGCACCTGGTCTGAGGTGGGGGCTTACGGTAGCATCACTAAGATTACGAACATGCCTAGAGAGCTCGCCGCGGATGACAACATCATTGCGCGGGATTGGGAGGGGCGCTTAGCGGGCAACGACGATAACAACAGTAATCCAGGTTTCGTCGAGAATGGCTACATCACAGGCATCGCAGCTTTCCAGGGCCGCCTGGTTCTGCTTAGCGGTAGCTCCGTGGATATGTCCGCCTCGGGCCTGTATCAGCGCTTCTACCGCTCTACTGTGACGTCACTGCTGGATACGGACCGTATCAGCATTAGCTCTGCGTCTGCACAGGACTCTGTGTACCGCACCGCTGTGCAGTTCAACCGGGACTTGGTCCTGTTTGCCAACAGCATGCAGGCGGTAGTGCCGGGTTCGGCAGTACTTACACCAACTAACGCGAGCATTAGTATTACCAGCACCTATGATTGCGACAGCCGTGTTACCCCGGTAATGGCGGGGCAGACAGTAATCTACCCGAACAAGCGCAACGACAGCTACGCCGGTATTCTGGAGTTAATCCCGTCGCCGTACACCGCTGCGCAGTACACTACGCAGGATGCCACGGTGCACCTACCTCGGTATATCCCAGGCAGGGTATTGCAGATGCAAAACTCCAGTGTCACCAATATGGCCTTCTCGCGCATGTCTGGAGAGCGTAATAGCCTGCTGGTCTACGAGTTCATGTGGGGCGGAAGTGACGGCGCTAAGATGCAGGCGGCGTGGCATAAGTGGTCGTTCCCGTATCCAATCCTGAGCGTACAGGCGCTGGAGGACGAGGTGTTCTTGTACATGCAAGGGCCCAGTCCCAGCAACAAGCTCCTGATTGTGTCTATGGACCCGCGTGAAGGTTATCAGCTGGGCTCAGAATACCGCGAAGCCTACTCGGATTTGCAGAAGCAAGTTCAAGTACAGGGAGGGGTGTTCACTGTTCCGGCAGTATTGCGCCCGGTTGGGTGGGCGGACAACTACAAGGAAGAGCTTATCCTAACGTACTTACCCAGCAACCCTATGGGGCCTACTGAGGTTGGCATCAAGGAGATTGCCGGGGAGAACACCCTACGGGTTGTGCGTGGCGTACCTGACGGCACTTATGTAATCGGGAGACGTTACCGTAGTACGTTCACGCTAACTACGCCTATTCTACGGGACCAGAATGACAAGCTCGTGGGAAGTGGGCATGTGCGCCTGCTGCGCCTGGACGTGGCAGTACGTAACTCCGGGCACTTCGACGTACAGGTACTAGACACCCCGCGGGACGTCAATTGGGGTGGGGAGCTAACTGGTATCCTGATGAACTCAAAGGAGCTGACGCTTGGGCAGGCCCTGCGTATGGACCTGGCTACGATTACCGTGCCATGTCGTACCAACGCAGACACAACCGAGGTGTCACTATTTACTGACGGTTCTATGGAACTGAACGTGTTGGATATATCGTACATCCTGCGCTACAACCAACGCAGACGGAGGATTTAA

Genome Context

Genome Context

Tertiary structure

PDB ID
723f5caac9985e1495214ec8177e68ecfbf28edbbcfd42b0dbd318aefa011b5f
ColabFold
Source ColabFold
Method ColabFold
Resolution 0,3162
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50

Literature

Title Authors Date PMID Source
Monitoring phage-induced lysis of Gram negatives in real time using a fluorescent DNA dye Egido,J.E., Toner-Bartelds,C., Costa,A.R., Brouns,S.J.J., Rooijakkers,S.H.M., Bardoel,B.W. and Haas,P.-J. 2022 — GenBank