Protein

Genbank accession
AVZ45661.1 [GenBank]
Protein name
putative tail fiber protein
RBP type
TF
Evidence RBPdetect
Probability 0,89
TF
Evidence RBPdetect2
Probability 0,96
Protein sequence
MPRLIFKNNFEVALAQPTTTSDTTITIRSGSDFPTLGANESVVATIVDAATGLQFEIVTVTAVVGNVLTVQRAQEGTAARAWATGDLLSIRNTAATLTGVVRNYGKLPSGINLNFLTGSWFGNYFQDFNADAQPVLNYPVLQAGVLEVLKTGPSIESCVQRYSTYYNNVTYQRTYNAVNGVWSRWEQIYNSESVIPVANGGTGQTTIQGMKSAFGFGQVADQNIVPTSMGGTGSGDNAQAWLNIRPIGPTPLAGDPVNDYDAATKRWVENLVNTGTVGPSMNGVMNYGVGDFHLRDSRAYIQPYEVVSDGQLLNRADWPELWAYAQMLSPIADADWLADPAKRGKYSLGNGTTTFRVPDRNGVQAGSIPGLFGRGDGGVSSSDGRVRQNAAPNITGSIGTSISTQYNTAGNTGTGAIVPAPVVIPGLRVGPDGGATNLNYRNGLNIDASLSNGAYGRDGANEVRPNAFEGVWVIRASGGFVAANTSWSVINGDAVKPATGTLVRGGSVKSEYKIGTNIAYQAFLQAYGKIDGSSSECGAIVSNGVQEWSFNQYGALSFPDSITQIETQRSDGALTVNAYLRPKDLVAQPLNSVGVSAHERNAMRMVNFNQSTPGYVSYFSGDWYDGSYTFGGVRGGSTALERAQISINNGAGQAADFRFFPDGTASAGNWVSTSDERVKTNIQRISDPLGKMRLIKGVTWERLDKSEKPNGIGFIAQDVEGVFPDAVKTLKYSNTELKDGTIVEDIKSVDTYGVAAALHHEAILALMDQIDELKAEIAALKSAK
Physico‐chemical
properties
protein length:784 AA
molecular weight: 83450,85280 Da
isoelectric point:5,23330
aromaticity:0,08929
hydropathy:-0,22181

Domains

Domains [InterPro]
cd19958
105–189
cd19958 SSF88874 IPR030392 Coil
IPR030392
674–777
IPR030392
AVZ45661.1
1 784
Legend: Pfam SMART CDD TIGRFAM HAMAP SUPFAM PRINTS Gene3D PANTHER Other

Taxonomy

  Name Taxonomy ID Lineage
Phage Escherichia phage vB_EcoM-Ro157lw
[NCBI] 		2144177 Viruses > Duplodnaviria > Heunggongvirae > Uroviricota > Caudoviricetes
Host No host information

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
AVZ45661.1 [NCBI]
Genbank nucleotide accession
MH051335 [NCBI]
CDS location
range 5479 -> 7833
strand -
CDS
ATGCCAAGGCTAATATTCAAAAACAACTTTGAGGTCGCGCTGGCTCAACCAACGACGACTTCAGACACCACAATCACAATTCGCTCAGGGTCGGACTTTCCGACCTTGGGCGCAAACGAGAGCGTAGTGGCGACAATCGTTGACGCTGCAACAGGCCTTCAATTCGAAATCGTCACAGTAACAGCCGTGGTTGGGAACGTCCTGACCGTGCAGCGTGCACAGGAAGGGACTGCAGCGCGTGCATGGGCGACTGGAGATCTGCTTTCCATTCGTAACACTGCTGCGACCTTAACAGGGGTTGTAAGAAATTATGGCAAACTTCCTTCTGGGATAAATCTCAACTTTCTGACAGGCTCTTGGTTTGGAAATTATTTCCAAGACTTCAATGCAGATGCTCAGCCTGTTCTTAATTACCCAGTTTTACAAGCAGGAGTCCTTGAAGTTCTAAAAACTGGACCATCAATAGAAAGTTGTGTACAAAGATACTCAACATACTACAACAATGTTACATACCAAAGGACTTACAACGCGGTAAATGGAGTTTGGAGTCGATGGGAGCAAATATACAACAGCGAATCTGTCATCCCAGTAGCCAACGGCGGCACAGGACAAACTACCATCCAAGGGATGAAGTCCGCTTTTGGATTCGGGCAAGTCGCTGATCAAAATATTGTTCCTACTTCGATGGGAGGCACAGGATCAGGTGATAACGCGCAGGCATGGCTGAATATCCGACCGATAGGCCCAACTCCGCTTGCTGGCGACCCTGTAAATGATTATGACGCCGCGACTAAACGTTGGGTTGAGAACTTAGTAAACACCGGAACTGTTGGCCCAAGCATGAACGGTGTTATGAACTATGGCGTCGGTGATTTCCACTTACGGGACAGCCGTGCTTATATTCAACCTTATGAAGTCGTTTCTGACGGACAATTGTTAAATCGTGCAGACTGGCCTGAACTTTGGGCTTATGCGCAAATGCTTTCCCCTATTGCCGATGCTGACTGGCTTGCCGACCCAGCAAAACGCGGCAAATATTCTTTGGGCAACGGAACAACAACATTCCGCGTACCAGACAGAAACGGTGTCCAAGCGGGGTCCATCCCAGGCTTATTTGGACGAGGCGATGGTGGAGTGTCTTCTTCTGACGGTCGCGTAAGACAAAACGCAGCGCCAAACATAACCGGTTCAATTGGTACTTCAATATCAACGCAATATAACACGGCAGGTAACACAGGGACAGGGGCAATAGTTCCAGCACCTGTTGTTATTCCAGGCCTAAGAGTTGGTCCAGACGGAGGTGCAACAAACCTTAACTATAGGAACGGATTGAACATTGATGCAAGCCTTTCCAATGGCGCTTATGGGCGTGATGGTGCAAATGAAGTTCGACCTAATGCCTTTGAAGGCGTTTGGGTGATTCGTGCATCGGGTGGATTTGTTGCCGCGAATACGTCTTGGAGCGTTATCAACGGCGACGCAGTAAAACCTGCAACCGGAACGCTTGTCAGAGGCGGTAGTGTAAAATCTGAATATAAGATTGGCACGAACATCGCGTATCAAGCATTCTTGCAGGCATACGGCAAGATTGATGGATCATCGTCTGAATGTGGAGCAATAGTTTCAAATGGTGTGCAAGAGTGGTCATTCAACCAATATGGAGCACTATCTTTCCCGGACTCAATAACGCAAATTGAGACTCAGAGAAGTGATGGCGCATTGACTGTTAATGCATATCTCAGACCAAAAGACCTTGTTGCGCAACCGTTGAACTCAGTAGGCGTTTCAGCGCATGAAAGAAATGCCATGAGGATGGTCAACTTCAATCAATCAACGCCTGGATATGTGTCATATTTTTCAGGAGATTGGTATGATGGCAGCTATACATTTGGCGGCGTTCGCGGCGGCAGCACAGCCTTAGAGCGTGCGCAAATATCAATCAACAACGGGGCAGGGCAAGCCGCTGACTTCAGATTTTTCCCTGATGGGACTGCCAGTGCTGGGAACTGGGTTAGCACGTCTGATGAGAGGGTCAAGACGAACATTCAAAGGATTTCAGACCCGTTAGGGAAGATGAGGTTGATCAAGGGTGTGACTTGGGAGCGTCTTGATAAATCAGAAAAACCGAATGGAATTGGCTTTATCGCCCAAGACGTAGAAGGCGTATTCCCTGATGCAGTAAAGACTTTGAAATATTCAAACACGGAACTAAAGGATGGCACAATTGTCGAGGATATCAAATCAGTCGACACTTACGGAGTGGCTGCGGCGCTGCACCACGAGGCTATTCTTGCATTGATGGATCAGATAGATGAACTCAAGGCAGAGATAGCCGCGCTAAAATCAGCAAAATAA

Gene Ontology

No Gene Ontology terms available.

Enzymatic activity

No enzymatic activity data available.

Tertiary structure

PDB ID
ce1d0eb383782ee5c5f19832fb0f0e72d671216a1bdd9fd8378dba331e10b6db
ColabFold
Source ColabFold
Method ColabFold
Resolution 0,2786
Evidence 0,2786
Download PDB

Literature

Title Authors Date PMID Source
Genomics characterization of novel bacteriophages specific to non-O157 and O157 Shiga toxin-producing Escherichia coli (STEC) in non-fecal composts Liao,Y.-T., Sun,X., Quintela,I.A., Bridges,D.F., Liu,F., Zhang,Y., Salvador,A. and Wu,V.C.H. 2019-04-02 — GenBank