Protein

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Genbank accession
QGT54873.1 [GenBank]
Protein name
baseplate wedge subunit
RBP type
TSP
Evidence DepoScope
Probability 0,82
Protein sequence
MPAIITDQMRISRAKQFVSAASSSNYYSFIGLTNPNDFFTDWNVSPPAPKDSFEQELGYWDTMIALKKVYPNDIRQSIRKINWEDGVIYDMYRHDISRDNTAKPSGATSLYSSNFYIVNSNYQVYICLHNGTSPNNPIGKPSQFEPTFTDLEPRSVGNGSDGYIWKYLFTLNAVDIIRFDSTNFIPVPRNWGNDEQTSIIRNNAINTGQIKICVIKNRGNYSNISDISNSVFRDVPIKGDGTGGLVTITFNNNAEVENIFVTNGGSNYTHGRVDIFAGGLPSPQIKPEFDVIIPPKGGHGYDVYNELGAFYVSLYARIENDLNNPDFITGNEIAQIGIVENPEKYNSNEQLTGDKVSALSAIKLVGITNPNDYRAASFNPDSYITQTIGTGTTAVGRVVSYDKNTGVLKYWQDKSLVGFNTNGTQKNPLYGFNLERFTATPTGTGNLVISGGSINLNIDVLYGSIENPGITTVINNRTYRLGQSFVNGLAEPEVKKYSGNVIYVDNRPAITRSQNQKEDIKVILQF
Physico‐chemical
properties
protein length:526 AA
molecular weight: 58344,29540 Da
isoelectric point:5,45946
aromaticity:0,11027
hydropathy:-0,39981

Domains

Domains [InterPro]
IPR036327
STR
1–275
IPR036327 G3DSA:2.60.340.10
G3DSA:2.60.340.10
RBD
5–124
G3DSA:2.60.340.10 IPR036327
QGT54873.1
1 526
Architecture
STR
RBD
STR
STR 1-275 | RBD 464-482 | STR 483-526
Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Tail Spike Domain Segmentation

Tail Spike Domain Segmentation

This protein has been segmented into three structural domains: N-terminal, central domain, and C-terminal.

Domain Layout
N-terminal
Central
C-terminal
QGT54873.1
1 526
Domain Start End Length (AA) Confidence
N-terminal 1 296 296 0,7791
Central domain 297 495 200 0,7291
C-terminal 496 526 30 0,5192
Legend: N-terminal Central domain C-terminal
3D Structure with Domain Coloring

The structure is colored according to the domain segmentation: N-terminal (blue), Central (green), C-terminal (pink).

Domain Coloring
N-terminal
1-296
Central
297-495
C-terminal
496-526

Taxonomy

  Name Taxonomy ID Lineage
Phage Synechococcus phage B23
[NCBI] 		2674977 Viruses > Duplodnaviria > Heunggongvirae > Uroviricota > Caudoviricetes
Host No host information

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
QGT54873.1 [NCBI]
Genbank nucleotide accession
MN695335 [NCBI]
CDS location
range 137761 -> 139341
strand +
CDS
ATGCCTGCCATTATAACCGATCAGATGAGAATATCCCGCGCAAAACAATTTGTGTCAGCGGCATCCTCTTCAAATTATTATAGTTTTATAGGGCTCACCAACCCCAATGATTTTTTTACTGATTGGAATGTGTCCCCGCCCGCACCAAAAGATAGTTTTGAGCAAGAATTAGGATACTGGGATACAATGATCGCATTGAAAAAAGTGTATCCAAATGATATACGTCAATCAATCAGAAAAATTAACTGGGAAGATGGTGTAATTTATGATATGTATAGACATGATATAAGCAGAGATAATACAGCAAAACCATCAGGTGCTACAAGCTTGTATTCATCAAATTTTTATATTGTAAATAGCAATTATCAAGTATACATTTGTTTACATAATGGTACTTCACCTAACAATCCAATAGGAAAACCATCTCAATTTGAGCCAACCTTTACTGATCTAGAGCCAAGATCAGTCGGTAATGGTTCGGATGGATATATTTGGAAATACTTGTTTACTTTAAATGCAGTTGACATAATACGTTTTGATAGTACAAATTTTATACCAGTTCCCAGAAATTGGGGAAATGACGAGCAAACTTCAATTATAAGAAATAATGCAATAAATACTGGACAAATAAAAATATGCGTCATAAAAAACAGAGGGAATTATTCTAATATTTCTGATATAAGTAACAGCGTGTTTAGAGATGTCCCAATTAAAGGTGATGGTACTGGTGGACTAGTTACTATTACATTTAATAATAATGCGGAAGTTGAGAATATTTTTGTGACAAATGGTGGTTCAAATTACACTCACGGCCGAGTTGATATTTTTGCGGGTGGACTTCCATCTCCTCAAATTAAACCCGAGTTTGATGTAATTATACCACCTAAAGGTGGCCATGGTTATGATGTATACAATGAATTGGGCGCTTTTTATGTTTCATTGTATGCTAGAATTGAAAATGATTTAAATAATCCAGATTTTATAACTGGAAATGAAATAGCACAAATTGGAATTGTTGAAAATCCAGAAAAATACAATTCAAATGAGCAATTAACTGGTGATAAAGTTAGTGCTCTTTCTGCAATTAAACTTGTTGGTATAACTAATCCAAATGATTATCGGGCAGCATCATTTAATCCCGATTCATATATCACCCAAACAATAGGAACTGGTACAACTGCAGTTGGTAGAGTTGTATCTTATGATAAGAATACTGGAGTTCTAAAATACTGGCAAGATAAATCTCTTGTTGGATTTAATACAAATGGTACTCAAAAAAATCCTCTGTATGGATTTAATTTGGAGAGATTTACTGCAACTCCCACTGGTACCGGAAATCTAGTTATTTCAGGTGGAAGCATAAATCTAAATATTGATGTTTTATATGGATCTATCGAAAATCCAGGTATAACTACTGTGATAAATAATAGGACATATAGATTAGGTCAATCTTTTGTAAATGGGCTCGCTGAGCCCGAAGTGAAAAAATATTCAGGTAATGTTATCTATGTGGATAATAGACCAGCTATAACTAGATCCCAAAATCAAAAAGAAGATATTAAAGTAATTCTGCAGTTCTAA

Genome Context

Genome Context

Tertiary structure

PDB ID
4df9f18b57132204707ea3591b7752c1ce43be2d876e416574eba5bbb19a2bf0
ESMFold
Source ESMFold
Method ESMFold
Resolution 0,4724
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50

Literature

Title Authors Date PMID Source
Complete genome sequences for two Myoviridae strains infecting cyanobacteria in a subarctic lake Levesque,A.V., Thaler,M., Labrie,S.J., Marois,C., Vincent,A.T., Lapointe,A.-M. and Culley,A. — — GenBank