Protein

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Genbank accession
YP_010686028.1 [GenBank]
Protein name
tail protein
RBP type
TSP
Evidence DepoScope
Probability 1,00
TSP
Evidence RBPdetect
Probability 0,91
TSP
Evidence RBPdetect2
Probability 0,95
Protein sequence
MATTPTNKPIPSEDPRDLKFNAGKIDEEVNGSADYYTDRFGVQRLTNTGRNYQFQTAQDERETEFVASQADKEARFQQFLLNSGYQFLGDYENGPYTITARNQIIRYQNEFWRLNAATNPPYTTTGINSTSWAVDVTHMVSVGDANLRQELTTLGDGKAADLIPLNQGGTIQDAISSISPLSKGGVPDNSSFDNASIIEQALASGKHVDLLGKEWFISRPIYLPNNCILENGKLSTQAASGSGFMAGSIFAPGNYHPDYWEEVPKVAVTATKGQSTLTLSDASIVSVGDIIRLSSTTGILSAGFFVAQYLQLARVLSKSGNVITIDGPVETSLTLEAANADQPSYQARFNKPLFCCRDTIVRNIEVNTWDYWTADSATYNCIFENIKGKAKGVVYGNTFCKTKFNRINIVFSGRISELAFGSHDTDLTDITAIASPSGVSENVMLGWAESGRRCTLDNFKFMFNSNANPSTIIRVSGHRDSRIKRGVIIINNNTNNILSAEQYGNAANSGPGGIGTGYRSEVENILFEDISIFAYGATAVICDTQKTADTSVLNGVEFSKIKYYGAIPSVALSRAIGTAANLTTGVKADISSDIGGSIVLTNSRYNTFKFSGPVTVPSIVAASAVNAISIISPSRLSAKANNYSLEASLSVSSTTSGNVIRDMIYPAGSLRLSDSIKIDIAGSTGGLLGTKTVQVGFIGSDSSFKYVEMAALASEEIYFDMDLDVTLLSTGSGQVSAFISGFISKGAASGASTTGSRVLAVVSDIVSSNLDLQIRAWKGNSGDGLTITKMMIKLNDLTS
Physico‐chemical
properties
protein length:799 AA
molecular weight: 85525,71310 Da
isoelectric point:5,25803
aromaticity:0,08511
hydropathy:-0,10776

Domains

Domains [InterPro]

No domain annotations available.

Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Tail Spike Domain Segmentation

Tail Spike Domain Segmentation

This protein has been segmented into three structural domains: N-terminal, central domain, and C-terminal.

Domain Layout
N-terminal
Central
C-terminal
YP_010686028.1
1 799
Domain Start End Length (AA) Confidence
N-terminal 1 193 193 0,9920
Central domain 194 619 427 0,9915
C-terminal 620 799 179 0,9833
Legend: N-terminal Central domain C-terminal
3D Structure with Domain Coloring

The structure is colored according to the domain segmentation: N-terminal (blue), Central (green), C-terminal (pink).

Domain Coloring
N-terminal
1-193
Central
194-619
C-terminal
620-799

Taxonomy

  Name Taxonomy ID Lineage
Phage Klebsiella phage VLCpiS13b
[NCBI] 		2874886 Viruses > Duplodnaviria > Heunggongvirae > Uroviricota > Caudoviricetes
Host Klebsiella pneumoniae
[NCBI] 		573 cellular organisms > Bacteria > Pseudomonadati > Pseudomonadota > Gammaproteobacteria > Enterobacterales

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
YP_010686028.1 [NCBI]
Genbank nucleotide accession
NC_071155 [NCBI]
CDS location
range 30249 -> 32648
strand +
CDS
ATGGCTACTACCCCAACTAACAAGCCAATTCCTTCTGAAGACCCGCGTGACCTGAAGTTTAACGCCGGGAAGATTGATGAAGAGGTTAACGGAAGCGCTGATTACTACACTGACCGTTTCGGCGTGCAGCGCCTGACCAATACCGGGCGTAACTATCAGTTTCAGACCGCACAGGATGAAAGAGAAACCGAGTTTGTAGCCTCTCAGGCAGATAAAGAAGCACGGTTTCAACAATTTCTTTTGAATTCTGGTTATCAGTTTCTTGGAGATTATGAAAACGGACCATATACGATTACGGCCCGGAATCAAATTATCCGCTATCAGAATGAATTCTGGCGGTTAAATGCTGCAACCAATCCACCATACACAACCACGGGGATAAATAGCACTTCATGGGCTGTTGATGTTACTCACATGGTGAGTGTTGGCGATGCTAACTTAAGACAGGAGTTAACCACACTCGGTGATGGTAAAGCGGCAGATCTTATACCTTTGAATCAAGGCGGAACTATACAGGATGCTATCTCATCTATTTCACCGTTATCAAAAGGAGGTGTTCCTGATAATTCATCTTTTGATAATGCCTCAATCATTGAGCAAGCGTTAGCATCTGGTAAGCATGTGGATTTACTTGGTAAAGAATGGTTTATCTCAAGACCCATTTATTTACCCAATAATTGCATTCTAGAAAATGGTAAATTATCCACACAGGCTGCGTCAGGTTCTGGATTTATGGCTGGAAGTATTTTTGCACCAGGAAACTATCATCCAGACTATTGGGAAGAAGTACCTAAAGTAGCTGTAACGGCGACAAAAGGCCAGAGTACTTTAACACTATCTGATGCGTCAATAGTTTCAGTTGGTGATATTATCCGTTTATCTTCAACTACGGGCATACTTAGCGCTGGTTTTTTTGTTGCGCAATATCTCCAGCTGGCTAGGGTTTTAAGTAAATCCGGCAATGTGATTACGATAGATGGCCCTGTCGAGACGTCGCTTACACTGGAGGCAGCAAACGCGGACCAGCCGTCATATCAAGCGCGCTTTAATAAGCCGTTATTTTGTTGCCGTGATACCATCGTGCGCAATATTGAGGTTAATACATGGGATTACTGGACAGCGGATAGTGCCACTTATAATTGCATTTTCGAAAATATTAAAGGGAAGGCAAAAGGAGTGGTTTATGGTAATACATTCTGTAAAACTAAATTTAACAGAATAAATATAGTTTTTTCAGGTCGAATCAGTGAACTCGCTTTTGGCTCGCATGATACCGACCTGACCGACATAACAGCTATTGCCAGCCCTTCTGGAGTAAGTGAAAACGTAATGCTTGGGTGGGCAGAGTCCGGGCGTCGTTGCACACTTGATAATTTCAAGTTTATGTTTAATAGTAATGCTAATCCATCCACTATCATCAGAGTTTCAGGTCACAGGGATTCTCGAATAAAACGCGGCGTTATAATTATCAACAATAACACTAATAACATATTGAGTGCGGAGCAGTACGGCAATGCCGCAAACTCTGGTCCAGGAGGTATAGGAACGGGTTATCGTTCAGAAGTGGAAAATATTTTATTTGAAGATATATCAATTTTTGCGTATGGTGCTACGGCAGTTATCTGTGATACACAAAAAACTGCAGACACCTCTGTTTTAAACGGTGTTGAATTTAGTAAAATAAAATACTATGGCGCCATACCGTCTGTTGCTCTTTCTCGGGCTATAGGGACTGCGGCTAATTTAACAACTGGTGTAAAGGCGGATATCTCATCTGATATAGGCGGCTCTATAGTATTAACCAATTCACGTTATAATACGTTTAAATTCAGCGGTCCTGTAACTGTCCCATCGATCGTAGCCGCCTCTGCCGTTAATGCTATATCTATAATCAGTCCGTCCAGATTATCAGCCAAAGCCAATAACTATTCACTAGAGGCCAGTTTAAGTGTAAGCTCCACTACGTCTGGTAATGTTATAAGGGACATGATATACCCGGCTGGAAGTCTTAGATTGAGTGATTCAATTAAAATTGACATCGCTGGGAGCACTGGGGGGCTTTTAGGAACCAAAACTGTACAGGTGGGGTTTATAGGTTCTGACTCATCTTTTAAGTATGTTGAGATGGCAGCACTTGCATCAGAAGAAATTTATTTCGATATGGATCTAGATGTTACTTTGTTAAGCACTGGGAGCGGTCAAGTATCTGCATTTATTTCTGGATTTATTAGTAAAGGCGCCGCATCAGGAGCTTCCACCACTGGTAGTCGTGTTTTGGCGGTTGTTTCCGATATAGTAAGTAGTAATCTTGACTTACAAATAAGAGCTTGGAAGGGTAACTCAGGTGATGGGCTAACCATAACTAAAATGATGATTAAATTGAACGATCTTACGTCATAA

Genome Context

Genome Context

Tertiary structure

PDB ID
7fa94e8f3ffce9aaf6f6f763f2f552455f135c53e25dcc09b403c66db97df680
ColabFold
Source ColabFold
Method ColabFold
Resolution 0,2881
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50

Literature

Title Authors Date PMID Source
Genetic determinants of host tropism in Klebsiella phages Beamud,B., Garcia-Gonzalez,N., Gomez-Ortega,M., Gonzalez-Candelas,F., Domingo-Calap,P. and Sanjuan,R. — — GenBank