Protein

View in Explore
Genbank accession
YP_010669799.1 [GenBank]
Protein name
tail fiber protein
RBP type
TF
Evidence GenBank
Probability 1,00
Protein sequence
MKPVDILLLISELEGCHTHTKRFGFEEDMAIFDQMRKKYYKLYFKLKREEDNPL
Physico‐chemical
properties
protein length:54 AA
molecular weight: 6609,67120 Da
isoelectric point:6,71555
aromaticity:0,12963
hydropathy:-0,62593

Domains

Domains [InterPro]
IPR055636
STR
2–50
IPR055636
YP_010669799.1
1 54
Architecture
STR
STR 2-50 |
Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Taxonomy

  Name Taxonomy ID Lineage
Phage Synechococcus phage S-SCSM1
[NCBI] 		2588487 Uroviricota > Caudoviricetes > Pantevenvirales > Zhoulongquanvirus > Zhoulongquanvirus esscess
Host Synechococcus sp. WH 7803
[NCBI] 		32051 Bacteria > Cyanobacteria > Oscillatoriophycideae > Chroococcales > Synechococcus >

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
YP_010669799.1 [NCBI]
Genbank nucleotide accession
NC_070962.1 [NCBI]
CDS location
range 99752 -> 99916
strand +
CDS
ATGAAACCAGTAGACATCTTACTTCTAATATCTGAATTGGAAGGGTGCCATACGCACACTAAGAGATTTGGTTTTGAAGAAGACATGGCAATCTTCGATCAAATGAGAAAGAAGTATTATAAACTATACTTCAAACTCAAGAGAGAAGAAGACAATCCTCTATAG

Genome Context

Genome Context

Tertiary structure

PDB ID
c76e0d062aacfa24606b4b4bdea44cd404098cbabd46e4f6dfbd5df3c36656c1
ESMFold
Source ESMFold
Method ESMFold
Resolution 0,8169
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50

Literature

Title Authors Date PMID Source
Genomic and proteomic characterization of cyanophage S-SCSM1 provides new insights into understanding the viral gene diversity and phage-host interactions Wang,Q., Xu,Y., Jiao,N. and Zhang,R. 2022-10-26 — GenBank