Protein

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Genbank accession
QDK04530.1 [GenBank]
Protein name
hypothetical protein
RBP type
TSP
Evidence RBPdetect
Probability 0,91
Protein sequence
MAGYTGNPAFAEYFVEASNTTLYKNTTDFGSVTLDLENTSWTTVSALPVTLTPDSADSEVHQVLISFDAVHTVEQNFPDFFGDVFTEDEKRAKLQTRLTRISILPSGLVTDTTNCDIVLNSSVSQNNNLVLSRPALNTSIQTSSDAGQYVYPDGSIRVSVLAYDTTTVTGKSNVFLYFDYSPKEDANPRTFSLNGVKQPWYVGVQKVNYDALPPIVSNYQQTGRGATNYFYKQSADVRYISMDIFIIADKPELLRGRVRQLASYLNHPDEDMLLRFSDDPDYVWKVRLDGSTSIEEALHVGAGTLTFMCVQNSAEGELIERRFTNADTKPSSILVSGNAPTHPLVSITMKEDSTHLNLVGANGDVTVGTPPGDAKPKPPVNLHPMVFQSYMSANETRWTNWSSGFNGLGSQGFKYGGTFSRASDTFYMKPSNYPPKPANDDIAAYYGAANKAAMPHALLNFDMEAVLHLHHKIGDKNASNYICISMIGADGQGFISVNLEYSSLLKGQGVCRIDDGSVPDGLLRRVSNDWTDFYGKIMIQRRNGKFRWGAGEFRNAKQYEVKDGYFYGTSALRSTWWSPWINLPPDSSMNTKATEIGIVIARSKWKKNQCNSAKIANIRVWEVLDPPDTSTPPLHLVKDDVVDIDMQSGQIYLNGQLKPALLDPTSDFFPLIPGYNNLVVTPANVDMTVQYHNRVF
Physico‐chemical
properties
protein length:696 AA
molecular weight: 77166,64500 Da
isoelectric point:5,45446
aromaticity:0,10489
hydropathy:-0,33879

Domains

Domains [InterPro]
DC_0077
STR
69–696
DC_0077
G3DSA:2.40.30.200
ATT
186–312
G3DSA:2.40.30.200 G3DSA:2.60.120.860
IPR006520
Unmapped
193–309
IPR006520 IPR054738
IPR008841
STR
209–309
IPR008841
QDK04530.1
1 696
Architecture
STR
ATT
STR
STR 69-185 | ATT 186-312 | STR 313-696
Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Tail Spike Domain Segmentation

Tail Spike Domain Segmentation

This protein has been segmented into three structural domains: N-terminal, central domain, and C-terminal.

Domain Layout
N-terminal
Central
C-terminal
QDK04530.1
1 696
Domain Start End Length (AA) Confidence
N-terminal 1 386 386 0,9356
Central domain 387 585 200 0,1663
C-terminal 586 696 110 0,3980
Legend: N-terminal Central domain C-terminal
3D Structure with Domain Coloring

The structure is colored according to the domain segmentation: N-terminal (blue), Central (green), C-terminal (pink).

Domain Coloring
N-terminal
1-386
Central
387-585
C-terminal
586-696

Taxonomy

  Name Taxonomy ID Lineage
Phage Listeria phage LP-010
[NCBI] 		2590046 Uroviricota > Caudoviricetes > Homburgvirus >
Host No host information

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
QDK04530.1 [NCBI]
Genbank nucleotide accession
MN114082 [NCBI]
CDS location
range 13118 -> 15208
strand +
CDS
ATGGCAGGATATACAGGTAATCCAGCTTTTGCAGAGTATTTTGTGGAAGCTTCAAATACTACTTTATACAAAAATACCACGGATTTTGGAAGTGTCACTTTAGATTTAGAAAACACGTCATGGACAACAGTTAGTGCTCTTCCTGTAACTCTTACTCCAGATTCGGCAGATAGTGAAGTGCATCAAGTTCTTATAAGCTTTGATGCTGTGCACACTGTAGAACAGAACTTCCCAGATTTTTTCGGAGATGTTTTTACAGAAGATGAAAAACGTGCTAAGTTACAAACACGTCTAACTCGTATATCAATTCTTCCCAGTGGTTTGGTAACGGATACAACTAACTGTGATATTGTTTTAAATAGCTCAGTAAGCCAAAATAATAATCTAGTACTTTCTAGACCTGCTCTTAACACTAGTATACAAACTAGTTCAGATGCGGGACAGTATGTTTATCCAGATGGAAGTATTCGTGTAAGTGTTCTGGCATATGATACAACGACAGTAACAGGAAAGAGTAACGTGTTCCTTTACTTTGACTACTCTCCTAAGGAAGATGCAAACCCAAGAACCTTCTCGTTGAATGGAGTAAAACAACCTTGGTATGTAGGTGTACAAAAAGTTAACTACGATGCTCTACCACCTATTGTTTCTAATTATCAACAAACCGGAAGAGGGGCAACAAATTATTTCTATAAACAATCCGCAGATGTGAGATACATTTCTATGGATATATTTATTATAGCAGATAAACCTGAATTACTTCGTGGACGAGTACGACAATTAGCTTCTTATTTAAATCATCCAGATGAAGATATGTTATTAAGATTTTCTGATGACCCCGACTATGTGTGGAAGGTTAGATTAGATGGCTCCACTTCAATAGAAGAAGCATTGCACGTAGGAGCAGGAACACTAACATTTATGTGTGTTCAAAACTCCGCAGAAGGAGAATTAATAGAGAGGAGATTCACAAATGCAGACACTAAACCTTCTAGTATTCTTGTTAGCGGAAATGCTCCCACACATCCTTTGGTATCTATCACGATGAAAGAAGATTCAACTCATTTAAATTTAGTAGGGGCTAATGGTGATGTAACTGTAGGAACTCCTCCGGGGGATGCTAAGCCAAAGCCACCTGTGAATTTACACCCTATGGTTTTCCAAAGCTACATGAGTGCAAACGAGACACGTTGGACAAACTGGTCTTCCGGTTTTAATGGTTTAGGTTCGCAAGGTTTTAAATATGGAGGAACTTTCTCACGAGCTAGTGACACGTTTTATATGAAACCTTCTAACTATCCGCCTAAACCTGCTAATGATGACATTGCTGCCTATTACGGAGCAGCGAATAAAGCTGCTATGCCTCATGCCTTGCTAAACTTTGATATGGAAGCTGTACTTCATTTACACCATAAAATAGGAGACAAGAATGCTTCTAACTACATTTGTATATCTATGATAGGTGCCGACGGTCAAGGTTTCATTAGTGTTAACTTAGAGTATTCCTCGCTACTAAAGGGTCAAGGTGTTTGTCGTATTGATGATGGTTCTGTACCTGATGGACTATTAAGACGAGTAAGTAATGACTGGACGGATTTTTATGGTAAGATAATGATACAGAGACGTAATGGTAAATTCCGTTGGGGAGCTGGTGAGTTCCGTAATGCTAAACAATATGAAGTTAAAGATGGATACTTCTACGGAACATCTGCCCTTCGTTCTACTTGGTGGTCTCCTTGGATTAACCTTCCACCAGACAGCTCCATGAATACAAAGGCAACAGAAATTGGTATTGTTATTGCACGCTCAAAATGGAAGAAAAACCAATGTAACTCTGCCAAGATTGCTAATATACGTGTATGGGAAGTTCTTGACCCACCAGACACATCCACGCCACCGCTTCATCTAGTTAAGGATGACGTAGTAGATATAGATATGCAAAGTGGTCAAATATATCTTAACGGACAATTGAAACCTGCCTTGCTTGACCCAACTAGTGACTTCTTCCCACTAATACCCGGATATAATAATCTAGTAGTAACACCAGCAAATGTAGATATGACTGTTCAATATCATAATAGAGTATTTTAA

Genome Context

Genome Context

Tertiary structure

PDB ID
02e723d3f02982f1e1b61d7a71386ac70ad3aa0b4705e51f3d7332fd3d373c9e
ESMFold
Source ESMFold
Method ESMFold
Resolution 0,6857
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50