Protein

View in Explore
Genbank accession
YP_009196209.1 [GenBank]
Protein name
tail fiber protein
RBP type
TF
Evidence UniProt/TrEMBL
Probability 1,00
TF
Evidence RBPdetect
Probability 0,88
Protein sequence
MADIVYRLEKGSPLTNQEMDDNLRELDQNRVKTSLLGATVGDGIPVMEDGVIKEENLPPISSGPPVGSVSWWPKRESISNGQLPADGQAVSRDTFPDLAQMVIDGNLPVVTEADWLADPLKRGSFTLGDGSTTIRLPDYNGRSLGSLGAIFLRGDGALSSGANGLIQRDALQNIKGSVRTTYGAIGGSEGALATLAGVTDGAPQYNTSAQGNRLDFDASRSARTATETRPLNVSGVWTIQAFTAVTNAGSIDIGALAADVTELQGDIEILGPKVDALGAAFETRATRLRVKSRNYATAGSNAPSTVTAARITFRPYDVAGKPVTLNTSALTLNNDTRQVGLNGRDTATAFPSPSVVHLFAVTNGTSVWTLASTNLPEVGPTPSAGSEGLPTHFCYLTTILHNTSGFLQCDTIGSKVVMIGNVTVATSITSGNRYSINMTGAYPYQFAKGWGGTFYSTLTAGVANAALTLFAEWEMGANHVSVTAYSAANSSAYSYLRSEFPAGQYIWVYAGLSGPSSSFLGRIFLDDYEIYNNCD
Physico‐chemical
properties
protein length:535 AA
molecular weight: 56365,14810 Da
isoelectric point:4,94092
aromaticity:0,08037
hydropathy:-0,10972

Domains

Domains [InterPro]
DC_2268
ATT
1–65
DC_2268 IPR037053 DC_2049
SSF88874
STR
59–240
SSF88874
IPR037053
ATT
64–144
IPR037053
YP_009196209.1
1 535
Architecture
ATT
STR
ATT 1-155 | STR 156-403 |
Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Taxonomy

  Name Taxonomy ID Lineage
Phage Achromobacter phage JWX
[NCBI] 		1589746 Uroviricota > Caudoviricetes > Steinhofvirus >
Host Achromobacter xylosoxidans
[NCBI] 		85698 cellular organisms > Bacteria > Pseudomonadati > Pseudomonadota > Betaproteobacteria > Burkholderiales

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
YP_009196209.1 [NCBI]
Genbank nucleotide accession
NC_028768 [NCBI]
CDS location
range 17671 -> 19278
strand +
CDS
ATGGCTGATATCGTATACCGTTTGGAAAAAGGGTCTCCTCTCACCAATCAGGAGATGGATGACAACCTGCGTGAGCTCGATCAAAATCGAGTGAAAACGTCCTTACTCGGCGCAACGGTTGGTGACGGCATTCCCGTTATGGAAGACGGGGTCATCAAAGAAGAAAACCTACCTCCAATCTCTTCCGGCCCGCCTGTGGGCTCTGTCTCGTGGTGGCCGAAGCGCGAGAGCATATCCAATGGGCAATTGCCAGCAGATGGACAAGCTGTCTCCCGAGACACGTTTCCTGACTTGGCGCAAATGGTCATTGACGGCAATTTGCCCGTTGTTACGGAAGCGGACTGGCTAGCAGACCCGCTGAAGCGCGGATCGTTCACACTTGGTGACGGTTCTACCACGATCCGTCTGCCTGATTACAATGGCCGGTCCTTGGGGTCACTTGGTGCTATTTTCTTGCGCGGTGACGGTGCACTGTCGTCAGGGGCTAATGGCTTGATTCAGCGCGACGCTTTGCAAAATATCAAGGGCTCAGTGCGTACCACCTATGGAGCAATTGGCGGGTCTGAGGGAGCTCTTGCCACGTTAGCAGGTGTTACGGATGGTGCACCCCAATACAACACCAGCGCCCAAGGTAATCGTCTAGATTTTGATGCTTCACGCTCTGCACGCACAGCAACCGAAACACGTCCTTTGAATGTGTCTGGCGTTTGGACCATTCAAGCTTTCACAGCAGTGACTAACGCTGGCAGCATTGATATTGGAGCTTTGGCAGCGGATGTTACAGAGCTGCAAGGCGACATTGAAATTTTGGGGCCTAAGGTTGATGCCTTGGGTGCGGCGTTTGAAACTCGAGCTACACGCTTGCGAGTTAAGTCACGAAACTATGCTACTGCAGGGTCTAATGCTCCTAGCACGGTCACGGCTGCTCGAATCACATTTCGTCCGTATGATGTGGCAGGCAAGCCTGTTACGTTGAATACCTCCGCTCTTACGCTTAATAATGATACTCGTCAAGTTGGCCTAAATGGCCGTGACACTGCAACGGCCTTTCCTAGCCCGTCTGTTGTCCATTTATTTGCAGTTACCAATGGCACTTCTGTATGGACTTTGGCTTCGACTAATTTGCCTGAAGTAGGGCCAACACCGTCAGCTGGCTCTGAGGGCCTGCCCACGCACTTCTGCTACTTGACTACCATCTTGCACAATACTTCCGGATTCCTTCAGTGTGACACTATTGGATCAAAAGTAGTTATGATTGGCAACGTAACTGTTGCTACGTCCATAACTTCCGGGAACCGTTATAGCATTAATATGACGGGCGCCTACCCGTATCAATTTGCAAAAGGTTGGGGCGGGACGTTTTATTCAACTCTTACCGCAGGTGTAGCAAATGCGGCACTTACATTGTTCGCAGAATGGGAAATGGGAGCGAACCACGTATCTGTAACCGCGTACTCTGCAGCAAACTCTAGCGCGTACTCGTATTTGAGGTCCGAGTTCCCGGCTGGCCAGTACATATGGGTTTATGCTGGTTTGTCTGGCCCTAGCAGCAGTTTCCTTGGTCGTATTTTCCTAGACGATTATGAGATTTACAACAATTGTGACTGA

Genome Context

Genome Context

Tertiary structure

PDB ID
f8996e101db41921d3d17a04ab4ae188f1dac376b08ab8ca57f40370f96a6e32
ESMFold
Source ESMFold
Method ESMFold
Resolution 0,6726
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50

Literature

Title Authors Date PMID Source
Characterization and genome comparisons of three Achromobacter phages of the Siphoviridae family Dreiseikelmann,B., Bunk,B., Rohde,M. and Wittmann,J. 2017-03-29 — GenBank