Protein

View in Explore
Genbank accession
AQY55045.1 [GenBank]
Protein name
tail fiber protein
RBP type
TF
Evidence Phold
Probability 1,00
TSP
Evidence RBPdetect
Probability 0,89
Protein sequence
MNSSVGVGSVVVKDSYIYYIFGGENHFNPMTYGDNKDKDPFKGHGHPTDIYCYKMQIANDNRVSRKFTYGATPGQAIPTFMGTDGIRNISAPLYFSDNIVTEDTKVGHLTLKASTSSNIRSEVQMEGEYGFIGKSVPKDNPTGQRLIICGGEKTSSSSGAQITLHGSNSSKAKRITYNGNEHLFQGAPIMPAVDNQFAAGGPSNRFTTIYLGSDPVTTSDADHKYGISSINTKVLKAWSRVGFKQYGLNSEAERNLDSIHFGVLAQDIVAAFEDEGLDAIKYGIVSFEEGRYGVRYSEVLILEAAYTRHRLDKLEEMYATNKIS
Physico‐chemical
properties
protein length:324 AA
molecular weight: 35543,26350 Da
isoelectric point:6,31421
aromaticity:0,10185
hydropathy:-0,43457

Domains

Domains [InterPro]
G3DSA:2.120.10.10
STR
1–59
G3DSA:2.120.10.10 IPR024430 IPR030392
IPR024428
ENZ
1–58
IPR024428 IPR044914 cd10144
IPR036278
STR
2–63
IPR036278 SSF69349 IPR036388
IPR001724
Unmapped
5–29
IPR001724 IPR001724 IPR001724 IPR030392
AQY55045.1
1 324
Architecture
STR
RBD
CHP
STR 1-218 | RBD 219-290 | CHP 291-321 |
Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Tail Spike Domain Segmentation

Tail Spike Domain Segmentation

This protein has been segmented into three structural domains: N-terminal, central domain, and C-terminal.

Domain Layout
N-terminal
Central
C-terminal
AQY55045.1
1 324
Domain Start End Length (AA) Confidence
N-terminal 1 10 10 0,0037
Central domain 11 209 200 0,0971
C-terminal 210 324 114 0,9990
Legend: N-terminal Central domain C-terminal
3D Structure with Domain Coloring

The structure is colored according to the domain segmentation: N-terminal (blue), Central (green), C-terminal (pink).

Domain Coloring
N-terminal
1-10
Central
11-209
C-terminal
210-324

Taxonomy

  Name Taxonomy ID Lineage
Phage Escherichia phage K1E
[NCBI] 		344022 Uroviricota > Caudoviricetes > Autographivirales > Molineuxvirinae > Vectrevirus
Host Escherichia coli IHE3034
[NCBI] 		714962 Pseudomonadota > Gammaproteobacteria > Enterobacterales > Enterobacteriaceae > Escherichia > Escherichia coli

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
AQY55045.1 [NCBI]
Genbank nucleotide accession
KY435490.1 [NCBI]
CDS location
range 43230 -> 44204
strand -
CDS
GTGAACTCTAGTGTAGGTGTAGGTTCTGTTGTAGTTAAAGACAGCTACATTTACTATATCTTTGGTGGTGAAAACCATTTCAACCCAATGACTTATGGTGACAACAAAGATAAAGACCCATTTAAAGGTCATGGACACCCTACTGATATATACTGCTATAAGATGCAGATTGCAAATGACAATCGTGTATCTCGTAAGTTTACATATGGTGCAACTCCGGGTCAAGCTATACCTACTTTCATGGGTACTGATGGAATACGAAATATCTCTGCACCTTTGTATTTCTCAGATAACATTGTTACAGAGGATACTAAAGTTGGACACTTAACACTTAAAGCAAGCACAAGTTCCAATATACGATCTGAAGTGCAGATGGAAGGTGAATATGGCTTTATTGGTAAGTCTGTTCCAAAGGACAACCCAACTGGTCAACGTTTGATTATTTGTGGTGGAGAAAAGACTTCGTCCTCTTCAGGTGCACAGATAACTTTGCACGGCTCTAATTCAAGTAAGGCTAAGCGTATCACTTATAACGGAAATGAGCACCTATTCCAAGGTGCACCAATCATGCCTGCTGTAGATAACCAGTTTGCTGCTGGGGGGCCTAGTAACCGATTCACTACCATCTACCTAGGCAGTGACCCTGTTACAACTTCAGATGCTGACCACAAGTACGGTATCTCTAGTATTAATACCAAGGTGTTAAAGGCTTGGAGCAGGGTTGGTTTTAAACAGTATGGTTTGAATAGTGAAGCAGAGAGGAACCTTGATAGCATACACTTCGGTGTCTTGGCTCAGGATATTGTAGCTGCTTTTGAAGATGAAGGGTTAGATGCCATTAAGTATGGAATTGTGTCCTTCGAAGAAGGTAGGTACGGTGTGAGATATAGTGAAGTTCTAATCCTAGAGGCTGCCTATACTCGCCATCGTCTTGATAAATTAGAGGAGATGTATGCCACTAATAAAATCAGTTAA

Genome Context

Genome Context

Tertiary structure

PDB ID
6a710b823a46be37bd10c6acd0aa0658ab70f7806ab5f99738019f478b6a64a0
ESMFold
Source ESMFold
Method ESMFold
Resolution 0,6377
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50

Literature

Title Authors Date PMID Source
Kinetics of targeted phage rescue in a rapidly developing systemic mouse model of the meningitis causing Escherichia coli K1 strain IHE3034 Schneider,G., Szentes,N., Horvath,M., Dorn,A., Nagy,G., Doffkay,Z., Maroti,G., Rakhely,G. and Kovacs,T. 2018-07-11 — GenBank