Protein

View in Explore

Genbank accession

AZF92540.1 [GenBank]

Protein name

tail fiber protein and host specificity

RBP type

Evidence Phold

Probability 1,00

Protein sequence

MLLTIHDANLQKIGFIDNEKQETLNFYNDTWTRNLETASSTFEFTVSKKQLLSDTGNKHLYNQLNERSFVSFKYKGKTYLFNIMKTEENERWLRCYCENLNLELINEYTNAYKADRPRSFAEYLDVFEIPQFAMVKIGVNEISDQKRTLEWEGQETKLARLLSLANKFDAEVEFVTQLNDDSSIKQLVLNVYHKADDSHTGVGRIRGDIRLTFEKNIKSMTRKIDKTEVYTLVVPYGKSKETHEGEQEVRVYIDSLPPWEEKNDEGIVIFKQEGVNLYAPHAADLYPSTFGVSTQSNKWIRKDLEVDSDNPSVIRAAGIANLRKHAYPAITYEVDGFVDVEIGDTITIHDKGFTPALDIRSRAVEQKISFSNPTNNKTTFGNFKELENRTSGDLRSVFEQMVENSRPYNILVSTDNGVMFKNNTGRSTISPTLKRGNQTVPATYRFVIDGSIVSSGLTYTVKASDISKPTVITISAWVDNKEVASEEVTFVNVSDGKQGPKGDRGNDGLPGKDGVGLKSTTITYGMSDSDTIMPTSWTANPPTLIKGKYLWTKTQWTYTDSTSETGYQKTYIAKDGNNGNDGLPGKDGVGIRNTTITYAQGTSGTVAPTNGWSTQVPNVPAGQYLWTKTVWDYTDNTSETGYSVAKMGEQGPRGDQGIPGPKGIDGTDAPTIFVKSYTYSAGSKAYIKLTGPNAFEQTLYYSRGHNVWVLDATTHKLKEFVHCDTYITMSFNHNGVNITLADYLNSITDSIVAIAAADADAVDQNFRDVLNKMGGNPELGTWSWRTGHVFIGMSKRSDGTWPLQPRQGYEVAIQEDGSAPEIGCTLSIGGIVANGADGKTQYTHIAYANSADGSKDFSTSDSNRAYIGMYVDFNINDSTNPSDYSWTLVKGADGTQGVPGKPGADGKTPYFHTAWAYSADGTDGFTTVYPNLNLLEGTATFDGMNPNSSDNSVSAITKTKISGIANTVMDVKTSGNAFAVGFYTQKGYNITAGQTITISFIAKASSDTSLFVGFEHFPSGHKMFTISTKWELYTYTFTATTSGTPTFVMYGWDMVAGQGFQLYNPKAELGSVATPWMPSASEVTTADYPSFIGQYTNYTQVDSPNPRDYTWSLIRGNDGKQGPQGPKGDRGIPGIKGADGRTQYTHIAYADTISGSGFSQTDVNKAYIGMYQDFNAEDSKNPQDYRWSKWKGSDGRDGIPGKAGADGRTPYVHFAYADSADGQKGFSLTQTGRKRYLGVLTNFFKEDSTNPSDYTWNDTTGSISVGGRNLLVKTNQGITNWNWQLSDGDKSVEEVKVDGIRAVKLIKGSTAANTGWNFIEYNGLLRELIQPKSKYVLSFDVKPSVDVTFYATLARGDFNEPLTDTVAMPKALANQWNKVSCVLTSKETLPNIAWQVVYLAGMPTTNGNWVIIKNIKLEEGDIPTQWTPAIEDIQDEIDSKADAAMTIEQINALNERAGIIKAEMEAKASAEILNNWIKNYQDFVKANETERAAAEKALVSSSQRVSTIAKELGELSDRWNFIDTYMNSSNDGLVIGKNDGSSSMMFNPNGRISMYSAGEEVMYISQGVIHIENGIFSKTIQVGRYREEQYHLNPDMNVIRYVGGF

Physico‐chemical properties

protein length:	1605 AA
molecular weight:	177357,12800 Da
isoelectric point:	5,30350
aromaticity:	0,10530
hydropathy:	-0,50617

Domains

Domains [InterPro]

DC_0266
STR
1–726

DC_0266 DC_1971 G3DSA:2.60.120.260 G3DSA:1.20.5.320 DC_0002

IPR007119
Unmapped
59–381

IPR007119 PTHR24637 G3DSA:2.60.120.260

IPR010572
ENZ
144–385

IPR010572 IPR039477 DC_1971 IPR008979

IPR008979
STR
946–1046

IPR008979

DC_1328
STR
1025–1193

DC_1328

AZF92540.1

1 1605

Architecture

STR

STR 1-792 | STR 824-1605

Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Domains [InterPro]

Domain ID	Category	Cluster	Start	End	Layer	Name	Pref Zone	Confidence	Evidence	Support
DC_0266	STR	DC_0266	1	726	Novel HMM	DC_0266	Central	Low	Positional only	76 proteins / 76 hits
IPR007119	Unmapped	-	59	381	InterPro	Phage tail spike protein, N-terminal domain	-	-	-	-
IPR010572	ENZ	DC_0675	144	385	InterPro cluster	Tail spike domain	Central	High	Text match	419 proteins / 419 hits
PTHR24637	Unmapped	-	496	1208	PANTHER	COLLAGEN	-	-	-	-
IPR039477	STR	DC_0384	703	792	InterPro cluster	ILEI/PANDER domain	Central	Low	Positional only	49 proteins / 49 hits
DC_1971	STR	DC_1971	824	898	Novel HMM	DC_1971	Central	Low	Positional only	95 proteins / 95 hits
DC_1971	STR	DC_1971	893	1058	Novel HMM	DC_1971	Central	Low	Positional only	95 proteins / 95 hits
G3DSA:2.60.120.260	STR	G3DSA:2.60.120.260	937	1057	Merged direct domain	G3DSA:2.60.120.260	Central	Low	Positional only	264 proteins / 264 hits
IPR008979	STR	IPR008979	946	1046	Merged direct domain	Galactose-binding-like domain superfamily	Central	Low	Positional only	24 proteins / 24 hits
DC_1328	STR	DC_1328	1025	1193	Novel HMM	DC_1328	Central	Low	Positional only	136 proteins / 136 hits
G3DSA:1.20.5.320	STR	G3DSA:1.20.5.320	1114	1165	Merged direct domain	G3DSA:1.20.5.320	Central	Low	Positional only	67 proteins / 67 hits
DC_0002	STR	DC_0002	1193	1605	Novel HMM	DC_0002	Central	Low	Positional only	166 proteins / 166 hits
G3DSA:2.60.120.260	STR	G3DSA:2.60.120.260	1268	1420	Merged direct domain	G3DSA:2.60.120.260	Central	Low	Positional only	264 proteins / 264 hits
IPR008979	STR	IPR008979	1275	1419	Merged direct domain	Galactose-binding-like domain superfamily	Central	Low	Positional only	24 proteins / 24 hits

Taxonomy

	Name	Taxonomy ID	Lineage
Phage	Streptococcus phage CHPC1008 [NCBI]	2365006	Viruses > Duplodnaviria > Heunggongvirae > Uroviricota > Caudoviricetes
Host	Streptococcus thermophilus [NCBI]	1308	cellular organisms > Bacteria > Bacillati > Bacillota > Bacilli > Lactobacillales

Coding sequence (CDS)

Genbank protein accession

AZF92540.1 [NCBI]

Genbank nucleotide accession

MH937484.1 [NCBI]

CDS location

range 16229 -> 21046
strand +

CDS

ATGTTGCTAACAATTCACGACGCTAATTTGCAGAAGATTGGCTTCATCGATAACGAGAAGCAAGAAACGTTAAATTTCTATAATGATACTTGGACCCGAAACCTTGAAACAGCATCAAGCACGTTCGAGTTTACTGTTTCTAAAAAACAGTTACTTAGCGATACAGGAAATAAACACCTTTATAACCAACTAAACGAGCGCTCTTTTGTTTCCTTCAAATATAAGGGCAAGACATATCTTTTTAACATCATGAAGACTGAAGAGAATGAGCGATGGTTACGATGTTATTGCGAAAACTTAAATCTCGAGCTGATAAATGAGTACACGAACGCCTACAAGGCTGACAGGCCTAGGTCTTTCGCGGAATATCTTGATGTATTCGAAATTCCTCAGTTTGCGATGGTTAAAATAGGTGTTAATGAGATCTCTGATCAGAAGAGAACGCTCGAGTGGGAAGGGCAGGAAACAAAACTGGCAAGGCTCTTAAGCTTGGCCAATAAATTTGACGCTGAAGTTGAATTTGTGACTCAACTTAACGATGACAGTTCAATTAAGCAACTCGTTTTGAACGTTTACCATAAAGCGGACGACTCGCACACTGGTGTGGGTCGGATTCGTGGCGATATTCGTCTTACGTTTGAAAAGAATATCAAATCAATGACGAGAAAGATTGATAAGACTGAAGTCTATACGCTGGTAGTTCCTTATGGCAAATCGAAAGAGACCCATGAAGGCGAGCAAGAAGTACGTGTCTACATTGACAGCCTTCCGCCTTGGGAGGAAAAGAACGATGAAGGTATTGTTATCTTCAAACAAGAAGGTGTCAACCTCTATGCACCTCATGCAGCCGACTTATACCCGTCTACTTTTGGCGTATCAACTCAATCTAATAAATGGATTCGGAAAGACCTTGAGGTCGATAGTGACAATCCGAGCGTTATCCGTGCCGCAGGAATTGCGAACTTGCGTAAACACGCCTATCCCGCTATCACTTACGAGGTTGACGGTTTTGTAGATGTAGAAATCGGGGATACCATAACAATCCACGACAAAGGATTCACACCAGCGCTTGACATAAGATCGCGTGCCGTTGAGCAAAAAATCAGCTTCAGCAATCCGACCAACAATAAGACCACTTTCGGAAACTTCAAAGAGCTTGAAAATAGGACGTCTGGAGACCTTAGGAGCGTTTTCGAGCAAATGGTTGAGAACAGTCGACCATACAATATCCTAGTCTCAACTGATAACGGTGTTATGTTTAAGAACAACACAGGGCGGTCAACCATAAGTCCAACGTTGAAACGAGGAAACCAGACCGTTCCCGCAACATATCGCTTTGTAATTGATGGCTCTATTGTTAGCTCTGGTCTGACCTATACCGTCAAAGCAAGCGATATCTCAAAACCAACTGTGATCACGATTTCAGCGTGGGTTGATAACAAAGAAGTAGCTTCAGAAGAAGTTACTTTTGTAAATGTATCAGATGGTAAACAAGGACCTAAGGGCGATAGAGGTAATGACGGCTTACCGGGTAAAGACGGGGTAGGCTTGAAATCTACCACAATCACTTACGGCATGTCTGACAGTGATACTATCATGCCTACGAGTTGGACTGCAAACCCACCAACTTTGATTAAAGGGAAATACCTATGGACTAAAACTCAGTGGACGTATACTGATAGTACAAGTGAGACTGGTTATCAAAAGACTTATATTGCTAAAGATGGTAATAACGGTAATGATGGCCTTCCGGGTAAAGATGGCGTTGGTATACGTAATACCACAATCACTTACGCACAAGGAACATCTGGAACAGTAGCACCAACGAATGGTTGGAGTACTCAAGTGCCGAATGTACCTGCTGGACAATACCTATGGACTAAAACAGTCTGGGATTATACTGACAACACTAGTGAAACTGGATATTCAGTCGCTAAAATGGGCGAGCAAGGTCCAAGAGGTGACCAAGGTATACCTGGTCCTAAAGGTATTGATGGTACTGATGCTCCAACGATTTTCGTTAAGTCCTATACATACTCAGCAGGTTCAAAGGCCTATATTAAACTGACTGGGCCAAATGCTTTTGAGCAAACCTTATATTACAGCCGAGGACACAATGTGTGGGTTCTTGATGCTACAACACATAAACTCAAAGAGTTCGTACATTGTGATACCTATATAACCATGTCATTTAATCATAATGGTGTTAATATAACATTGGCTGACTACCTAAATAGTATTACAGATAGTATTGTCGCAATTGCAGCAGCGGATGCAGACGCAGTTGACCAAAATTTTAGGGATGTGCTTAACAAAATGGGTGGTAATCCAGAACTTGGAACATGGAGTTGGCGAACTGGTCACGTCTTTATAGGCATGTCCAAGCGGTCTGATGGAACCTGGCCACTGCAACCACGACAGGGGTATGAAGTAGCCATACAAGAAGATGGATCAGCACCAGAAATTGGATGCACTCTGTCAATAGGAGGAATAGTTGCTAATGGAGCAGACGGTAAAACACAATATACCCATATTGCATACGCGAATAGTGCAGATGGAAGTAAAGATTTTTCAACTTCTGATTCTAATCGTGCCTATATCGGGATGTACGTTGATTTTAACATCAATGATTCAACCAATCCGAGCGATTACTCATGGACACTTGTTAAAGGTGCTGACGGTACTCAAGGTGTACCAGGAAAACCTGGGGCTGACGGGAAGACTCCTTATTTCCATACGGCGTGGGCTTACAGTGCAGATGGTACCGATGGTTTCACGACTGTTTACCCTAATTTGAATTTGTTGGAAGGGACCGCTACGTTTGACGGAATGAACCCTAACTCTAGTGATAATTCGGTTAGTGCTATTACAAAAACTAAAATATCAGGAATTGCTAATACAGTCATGGACGTAAAAACAAGCGGAAATGCTTTTGCCGTTGGTTTTTATACACAAAAAGGTTATAACATAACCGCTGGGCAGACCATTACTATTTCATTTATAGCAAAAGCATCAAGTGACACAAGTCTTTTTGTTGGATTTGAACATTTTCCAAGTGGACATAAAATGTTCACAATAAGCACAAAGTGGGAACTTTATACTTATACATTCACAGCAACAACGTCAGGAACTCCAACTTTTGTGATGTACGGGTGGGATATGGTAGCAGGGCAAGGATTCCAATTATACAACCCTAAAGCGGAACTAGGTTCAGTTGCTACCCCTTGGATGCCCTCGGCTAGCGAAGTCACAACTGCTGATTATCCAAGTTTCATCGGACAATATACAAACTATACACAAGTAGATAGTCCTAATCCTCGAGATTACACTTGGAGCCTCATTCGAGGTAACGATGGTAAACAAGGACCACAAGGTCCTAAAGGTGACCGAGGGATACCAGGGATAAAAGGTGCTGACGGAAGAACGCAGTATACCCACATAGCTTATGCTGATACAATTTCAGGTAGTGGCTTTAGTCAAACAGATGTCAATAAAGCCTATATTGGTATGTATCAAGACTTCAATGCCGAAGATAGCAAAAATCCACAAGATTATCGTTGGTCTAAGTGGAAAGGTAGTGATGGACGAGATGGTATTCCAGGAAAAGCTGGGGCTGACGGACGTACGCCTTACGTCCATTTTGCTTATGCCGATAGTGCCGATGGTCAAAAAGGTTTCAGTTTGACACAAACTGGACGCAAGCGCTATTTAGGTGTGCTTACCAACTTCTTCAAGGAAGACAGTACTAATCCTTCTGATTACACGTGGAACGATACTACGGGTAGCATCTCTGTAGGTGGTCGAAACTTGCTTGTAAAAACCAATCAAGGTATTACTAATTGGAATTGGCAGCTTTCCGATGGCGACAAGAGCGTTGAAGAAGTGAAAGTTGATGGCATTCGTGCTGTAAAACTAATCAAAGGTTCAACAGCAGCAAACACTGGGTGGAATTTCATTGAATATAATGGCTTGCTGCGTGAACTCATACAGCCGAAGTCGAAGTATGTTCTTTCGTTCGATGTTAAACCTAGCGTTGACGTAACTTTCTATGCAACGCTAGCACGAGGTGACTTTAACGAACCATTGACTGATACTGTCGCTATGCCTAAAGCATTAGCGAATCAGTGGAATAAGGTATCGTGCGTTTTGACAAGCAAAGAAACTTTGCCAAATATTGCATGGCAAGTTGTATACTTAGCAGGTATGCCAACAACAAACGGTAATTGGGTAATAATTAAAAATATCAAACTTGAAGAAGGTGACATACCTACTCAGTGGACACCTGCGATTGAGGACATACAAGATGAAATTGATTCCAAGGCCGATGCTGCTATGACGATTGAACAGATTAATGCACTTAATGAAAGGGCTGGGATCATTAAAGCAGAGATGGAAGCCAAAGCAAGCGCTGAAATTTTGAATAACTGGATTAAAAATTACCAAGATTTCGTTAAGGCAAACGAGACCGAGAGAGCTGCAGCCGAGAAAGCTTTGGTTAGCTCAAGTCAGCGGGTATCAACCATTGCTAAGGAATTAGGTGAACTGTCTGATCGTTGGAATTTCATCGATACTTACATGAACTCATCAAATGATGGGCTTGTGATTGGAAAGAATGACGGTAGCTCTAGCATGATGTTTAACCCTAACGGTCGCATTTCAATGTACTCGGCAGGGGAGGAGGTCATGTATATTTCGCAAGGTGTAATACACATCGAGAACGGGATCTTCTCGAAAACTATCCAAGTTGGTCGATATCGTGAGGAACAGTACCATCTTAACCCAGACATGAATGTCATTCGCTATGTAGGAGGTTTTTAA

Genome Context

Tertiary structure

PDB ID

f1b20c10530505ff9c988756f4fb9effdb6b1f516453c12d292b9ee8b9ef92fc

ColabFold

Source ColabFold

Method ColabFold

Resolution 0,7693

Oligomeric State monomer

Download PDB

Model Confidence

Very high
pLDDT > 90

High
90 > pLDDT > 70

Low
70 > pLDDT > 50

Very low
pLDDT < 50

Literature

Title	Authors	Date	PMID	Source
A comparative genomics approach for identifying host-range determinants of bacteriophages infecting Streptococcus thermophilus	Szymczak,P., Rau,M.H., Monteiro,J.M., de Pinho,M.G., Filipe,S.R., Vogensen,F.K., Zeidan,A. and Janzen,T.	2019-05-29	—	GenBank

Protein

Domains

Domains [InterPro]

Domains [InterPro]

Taxonomy

Coding sequence (CDS)

Coding sequence (CDS)

Genome Context

Genome Context

Tertiary structure

Predicted Aligned Error (PAE)

Model Confidence

Literature