Protein

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Genbank accession
XQQ52183.1 [GenBank]
Protein name
tail fiber protein
RBP type
TF
Evidence Phold
Probability 1,00
TSP
Evidence DepoScope
Probability 1,00
TF
Evidence RBPdetect
Probability 0,89
Protein sequence
MTDLVTEWFMEPSVRTNYRTMVYYKGDGQDTFEINFDGGFIYKEDVKAFSVKDDTRERKNHKVTFVNGSVSRVKLDNVIPKGWTVCIYRDTPKAKPLAQFTDGAIINEANLDRNAQQAMFAVSEMVDRFDSTVESVEAALKQVYEANKKADQAINTANKANSTANNAVGIANGAVNTANEAKQSAANANTTANGAVKTANEAKSIAQGLDGQIKQANTTANNAVTKADSAIATANEAKATANGIDAKATKALADSAQALKVANGIDGKATQALNNSKEALDKANVALQSQGVAKELTDRVDGYPTNTGVTWKGPHRFNSYISLDHTNDGSGRVLADTSGFIELATFYNKSWKHWRFNHNSGEVSTPNGTLVYNNHPQPSFRDIVTVRRNSGARVDLVNSTTSDRVSFIQDARSKPYLESRSGSNGSVMYSWDFPGEGGMVLTDKYWHRFTQGATETSMFSPNKKTYFNIKNDRSGVYNAAASRWNFIHQGSTFSILGEGTYTGLELVRGDSSLLRFETNTDYLTLVQRKADGSNDGIVEFPKPSGNRESIVYSSKVYGKSETYRKDEVYNKSESDGRYMRKGEAPSDIKFTGIRNINPLRAEQYSNPNYSISYFKKEDIYGRLVRFTYWNDKEIGKGSQFGSTGWQPYFGNGSVRRSDWGTHTRAEVAY
Physico‐chemical
properties
protein length:669 AA
molecular weight: 73868,64150 Da
isoelectric point:8,97124
aromaticity:0,10164
hydropathy:-0,68132

Domains

Domains [InterPro]
DC_0245
STR
1–641
DC_0245
IPR005604
ATT
19–133
IPR005604
XQQ52183.1
1 669
Architecture
STR
ATT
STR
STR 1-18 | ATT 19-133 | STR 134-641 |
Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Tail Spike Domain Segmentation

Tail Spike Domain Segmentation

This protein has been segmented into three structural domains: N-terminal, central domain, and C-terminal.

Domain Layout
N-terminal
Central
C-terminal
XQQ52183.1
1 669
Domain Start End Length (AA) Confidence
N-terminal 1 216 216 0,9310
Central domain 217 415 200 0,3014
C-terminal 416 669 253 0,8446
Legend: N-terminal Central domain C-terminal
3D Structure with Domain Coloring

The structure is colored according to the domain segmentation: N-terminal (blue), Central (green), C-terminal (pink).

Domain Coloring
N-terminal
1-216
Central
217-415
C-terminal
416-669

Taxonomy

  Name Taxonomy ID Lineage
Phage Salmonella phage vB_Sty_BCPSty_004
[NCBI] 		3413210 Viruses > Duplodnaviria > Heunggongvirae > Uroviricota > Caudoviricetes
Host No host information

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
XQQ52183.1 [NCBI]
Genbank nucleotide accession
PV368565.1 [NCBI]
CDS location
range 5682 -> 7691
strand -
CDS
ATGACAGATTTAGTAACAGAATGGTTTATGGAACCATCTGTACGTACTAATTACCGTACTATGGTATACTACAAAGGTGATGGACAAGATACCTTTGAGATTAACTTTGATGGTGGATTCATCTATAAAGAAGATGTTAAAGCTTTCTCGGTTAAAGATGATACACGTGAACGAAAGAACCATAAAGTTACTTTTGTTAACGGTTCTGTAAGCCGTGTTAAATTAGATAACGTTATACCTAAAGGTTGGACTGTATGTATCTACCGAGATACACCTAAAGCTAAACCTTTAGCACAGTTCACAGACGGTGCTATTATTAACGAAGCTAACTTAGACCGTAACGCACAACAAGCTATGTTTGCTGTGTCAGAGATGGTTGATAGATTTGACTCCACAGTTGAATCAGTTGAAGCTGCGTTAAAGCAGGTTTACGAGGCTAATAAGAAAGCTGACCAAGCTATTAACACTGCTAACAAGGCAAACAGTACGGCTAACAATGCGGTAGGTATTGCTAATGGTGCAGTAAATACAGCTAACGAAGCTAAACAGTCAGCAGCTAATGCAAATACAACTGCTAATGGCGCTGTTAAAACTGCAAACGAAGCTAAGAGTATTGCTCAAGGTTTAGATGGTCAAATTAAACAGGCAAACACTACAGCTAATAATGCAGTTACTAAAGCGGACTCAGCTATTGCAACAGCAAATGAGGCTAAAGCAACGGCTAACGGTATTGATGCTAAAGCAACAAAGGCACTTGCTGACTCAGCACAGGCATTGAAAGTAGCTAATGGCATTGATGGTAAAGCTACACAGGCTCTTAATAACTCTAAGGAGGCATTAGATAAAGCTAATGTAGCGTTACAATCTCAAGGAGTTGCTAAAGAGTTAACAGACCGTGTAGATGGATACCCTACTAACACAGGTGTGACTTGGAAAGGTCCGCACAGGTTTAATTCATATATCTCACTAGACCACACTAATGACGGTTCTGGTAGGGTTCTAGCAGACACATCTGGATTTATAGAATTAGCAACATTCTATAATAAATCTTGGAAGCATTGGAGGTTCAACCATAACTCTGGTGAAGTAAGCACACCTAATGGTACTCTAGTGTATAACAATCACCCACAACCGTCGTTTAGAGACATAGTTACTGTTAGACGTAACTCCGGTGCACGTGTAGACTTAGTTAATAGTACTACTTCAGATAGGGTATCTTTTATACAAGACGCACGAAGCAAACCTTACTTAGAATCACGCAGCGGTTCAAATGGTTCTGTTATGTATAGCTGGGATTTCCCGGGTGAAGGGGGTATGGTTTTAACTGATAAATATTGGCACAGGTTTACACAAGGTGCAACTGAGACAAGTATGTTCTCACCAAATAAGAAAACATACTTCAATATCAAGAACGATAGATCAGGCGTGTATAACGCAGCTGCATCAAGATGGAATTTCATTCACCAAGGAAGTACTTTCAGCATTCTCGGTGAAGGCACATACACAGGGTTAGAGTTAGTACGTGGTGATAGTTCACTTTTAAGATTTGAAACTAACACAGATTACTTGACACTAGTTCAAAGAAAGGCTGACGGTTCTAATGATGGTATTGTTGAGTTTCCTAAGCCGTCTGGAAATCGGGAATCTATAGTATATAGTAGTAAGGTTTACGGTAAAAGTGAGACATACCGTAAAGATGAAGTATACAACAAGTCCGAATCCGATGGGCGATACATGCGTAAGGGTGAGGCACCTAGTGACATTAAGTTTACTGGTATCCGTAATATCAACCCACTACGGGCAGAACAGTATAGTAATCCCAATTACTCAATAAGCTACTTTAAGAAAGAGGATATCTATGGTAGACTTGTTAGATTCACGTATTGGAACGATAAGGAAATAGGGAAAGGTAGTCAGTTTGGATCTACGGGGTGGCAGCCGTACTTTGGTAATGGTAGTGTAAGACGTAGTGACTGGGGTACACATACACGTGCTGAAGTTGCATACTAA

Genome Context

Genome Context

Tertiary structure

PDB ID
7a88271ea736076cbbc47bbcc57e861778bf9904ab518a15c1f0eb9065cd90b2
ESMFold
Source ESMFold
Method ESMFold
Resolution 0,6188
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50

Literature

Title Authors Date PMID Source
Complete genome sequence analysis of Salmonella phage Tevdoradze,E., Chubinidze,S. and Golijashvili,R. 2023-02 — GenBank