Protein

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Genbank accession
WKW84206.1 [GenBank]
Protein name
tail fiber protein proximal subunit
RBP type
TSP
Evidence RBPdetect
Probability 0,71
TF
Evidence RBPdetect2
Probability 0,95
Protein sequence
MLGQAFRASSGLDAAGEKVINVAKADKAVLSDGVNVEFFHQYNTIYQYDETRGYDKFHAVIRDRRVYYAKADIASPAGPFDALKWTGLRVDPTWQYVNATVGDGLQLLSGQYITADNRFNNLKFILPTAPVDGDTLVIKDVGGQPGVNDLLFTSITAATIESQGRVVGANYRATVPFSEFSFIYKAAGNRWQLDINASISQSYFVAPLTQGFQLQSGMVTWRQTAQGQIRMILPKFANHGDTISTHDIDGLNALNHSTLEVYPGSGHSINEAGVSKIESRTSGYGYFVFNDSSKTWEVWDGDQRTRIQVVKTDTNLLPFDHVLVTGNGVGTSTVTLTLPEDVAIGDRIQVTMDYLRRGQTCTIRVKPNSGEVIVGSKAQMQFQKRSEYPAISGWELVSSVSINADTDYVPYVELMYAKLDPALVGVVGSEYGWMIGVVVPKVERVDPANRDRLGVAALASQAEVDKNFEQNPSDETIVTPLTLAKKTATDTRRGIARLTTTAEIQIDSIATHRADTIVTPKILNERTATETRRGLAEVATQGETNGSTDDVAFVTGKKLHNRIASETLTGILAIVKKSGTPGTARNLAGVGVYDRADHLRAVTPATLNEFVATDTAKGVGYTATQAEVDGGSSDSNGPLFVTAERLGARRATESNHGLIEIATQAETNAGTDDTRAITPKKLNDRTAQEARTGIAAIATHAEVNTGTEGFKIVSPLKLKTRFDNMSRVEVDGDAGLTRTGTIWEKVSIGMLLANETQRGTLRVATQVEANGSDSDTTYITPKKLDGRKATRTLDGIVRIATTTETRAGTLSSVAVCPTDLIYMIQTEPTWSGNEARRGSVKTATMDSTFVGNDTVGSTQAYTSYSNDGLAVSPRGLNYALQNFLPKMATAQNSLSLGGVVAGDWVRRTVAQTVTGAMTFTAAMTAKNITSELTSVSSLKVRDGNLGAIEVGTQGANVLGTGLLMHAANDTGVVNDWFMYAGGRSTVLGVNEIGFVSVGPDGSTGLTKQFAVSRDGDVTANRHIRSTNGYLVLENSGARIYLGGGIATTNQLAQSVVGGFVFGNINSVMSVVTNGDDNFKINGSPVINTANAQTKLDPVYLRRDGGNTQTGKVLVAMNGDVKYSTFRNDNRYISSRGNDFVFGNTDTVNGRVCLDTNKNPIVKIGNFEYEIYHKGNKPTAEDVGAVDISGSSANNLTIRDWIKIGNVKIIANNLTKTVEFIWEE
Physico‐chemical
properties
protein length:1223 AA
molecular weight: 131443,58490 Da
isoelectric point:6,03837
aromaticity:0,07114
hydropathy:-0,23949

Domains

Domains [InterPro]

No domain annotations available.

Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Tail Spike Domain Segmentation

Tail Spike Domain Segmentation

This protein has been segmented into three structural domains: N-terminal, central domain, and C-terminal.

Domain Layout
N-terminal
Central
C-terminal
WKW84206.1
1 1223
Domain Start End Length (AA) Confidence
N-terminal 1 839 839 0,8730
Central domain 840 1038 200 0,2137
C-terminal 1039 1223 184 0,6636
Legend: N-terminal Central domain C-terminal
3D Structure with Domain Coloring

The structure is colored according to the domain segmentation: N-terminal (blue), Central (green), C-terminal (pink).

Domain Coloring
N-terminal
1-839
Central
840-1038
C-terminal
1039-1223

Taxonomy

  Name Taxonomy ID Lineage
Phage Aeromonas phage GomatiRiver_11
[NCBI] 		3003697 Viruses > Duplodnaviria > Heunggongvirae > Uroviricota > Caudoviricetes
Host Aeromonas sp.
[NCBI] 		647 cellular organisms > Bacteria > Pseudomonadati > Pseudomonadota > Gammaproteobacteria > Aeromonadales

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
WKW84206.1 [NCBI]
Genbank nucleotide accession
OP967013 [NCBI]
CDS location
range 23618 -> 27289
strand +
CDS
ATGTTAGGACAAGCATTTCGCGCATCGAGTGGTCTCGATGCTGCAGGTGAAAAAGTAATAAACGTTGCAAAAGCCGACAAAGCTGTTTTGTCCGATGGGGTCAACGTTGAGTTTTTCCACCAGTACAACACAATCTACCAATATGACGAAACTCGCGGTTATGACAAATTTCATGCTGTTATCCGGGATCGTCGTGTTTATTACGCAAAAGCTGACATTGCTAGCCCGGCTGGTCCGTTTGATGCTCTGAAATGGACAGGCCTTCGTGTCGACCCAACCTGGCAGTATGTAAACGCCACAGTGGGTGATGGTTTGCAATTACTGTCTGGCCAGTATATCACAGCTGATAACCGTTTCAACAACTTGAAGTTTATTTTGCCAACCGCTCCAGTTGACGGGGACACCTTGGTAATCAAGGATGTCGGTGGCCAGCCTGGTGTTAACGACTTGTTGTTCACTTCAATCACCGCCGCGACAATTGAGTCTCAGGGTCGTGTGGTTGGAGCAAACTATCGTGCAACCGTGCCTTTCAGTGAATTTTCCTTCATTTATAAGGCAGCTGGTAACCGGTGGCAACTGGACATCAATGCGTCAATTTCTCAAAGTTACTTTGTAGCCCCGTTGACCCAAGGTTTTCAACTTCAATCGGGAATGGTAACCTGGCGACAGACTGCTCAGGGCCAGATTCGTATGATTCTGCCAAAGTTTGCAAATCATGGTGACACAATTTCAACTCATGATATTGATGGCTTGAATGCTCTGAACCACTCAACTCTTGAGGTTTATCCAGGTTCTGGACATAGCATCAATGAAGCAGGTGTCAGCAAAATCGAATCCCGCACATCAGGTTATGGGTATTTTGTTTTCAATGATTCTTCAAAAACTTGGGAAGTTTGGGATGGTGACCAACGCACTCGTATCCAAGTTGTTAAAACTGATACAAACCTGTTGCCTTTTGATCATGTTCTGGTTACCGGCAATGGTGTAGGGACTTCGACAGTTACTCTGACACTCCCAGAAGATGTTGCTATTGGTGACCGTATCCAGGTAACCATGGATTATCTCCGTCGTGGACAAACTTGCACCATCCGAGTGAAACCAAACTCTGGTGAAGTTATTGTTGGGTCAAAAGCCCAAATGCAATTCCAGAAACGGTCAGAATATCCAGCAATTTCTGGTTGGGAACTTGTTTCATCTGTTTCAATTAATGCTGACACAGATTATGTTCCATACGTTGAATTAATGTATGCTAAACTTGATCCGGCTTTGGTTGGTGTTGTTGGCTCAGAGTATGGGTGGATGATTGGGGTAGTTGTTCCTAAAGTCGAGCGAGTTGATCCTGCCAACCGTGACCGTCTTGGTGTTGCCGCTCTGGCTTCTCAAGCTGAAGTTGATAAAAACTTTGAGCAAAACCCAAGTGACGAAACTATTGTTACTCCGTTGACTCTGGCTAAGAAAACTGCCACCGATACTCGTCGCGGTATTGCTCGATTGACAACCACCGCTGAAATCCAGATTGATAGTATCGCAACTCACCGAGCTGATACAATTGTTACTCCGAAAATCTTGAATGAGCGAACTGCCACTGAAACCCGACGTGGTTTGGCTGAAGTCGCAACCCAAGGTGAAACAAATGGTTCGACTGATGATGTTGCATTCGTGACTGGCAAAAAGCTTCACAATCGGATTGCTTCTGAAACCCTGACTGGTATTCTGGCAATTGTCAAAAAGTCTGGAACCCCAGGAACTGCACGAAACCTGGCTGGCGTCGGTGTTTATGACCGAGCTGATCATCTCCGTGCAGTCACACCAGCAACCCTGAATGAGTTTGTGGCGACTGATACTGCAAAGGGTGTTGGTTATACAGCAACACAAGCCGAAGTTGATGGTGGAAGTTCTGACAGCAATGGACCACTGTTTGTGACAGCAGAGCGTCTTGGTGCTCGCCGCGCAACTGAATCAAACCATGGTTTGATTGAAATTGCCACACAGGCTGAGACCAATGCTGGAACCGATGACACTCGAGCAATTACACCTAAGAAGCTGAATGACCGAACTGCTCAAGAAGCTCGCACTGGTATTGCTGCGATTGCAACTCATGCGGAAGTTAATACCGGCACGGAAGGTTTCAAAATTGTCAGTCCACTTAAACTGAAAACTCGTTTCGACAATATGTCACGCGTTGAAGTTGATGGTGATGCTGGTTTAACCAGAACCGGGACAATCTGGGAAAAAGTTTCCATTGGAATGCTTCTGGCAAATGAAACTCAGCGAGGAACTTTGCGAGTTGCAACCCAAGTTGAAGCAAATGGTTCTGATTCTGATACAACTTATATCACTCCAAAGAAATTAGATGGCCGCAAAGCTACAAGAACTCTGGATGGTATTGTTCGAATTGCAACCACAACTGAAACTCGTGCGGGAACACTAAGCTCTGTTGCTGTTTGTCCAACAGACCTGATCTACATGATCCAAACCGAACCAACTTGGTCTGGTAATGAGGCTCGTCGTGGTTCTGTGAAAACTGCAACAATGGATTCAACTTTTGTTGGAAATGACACTGTTGGTTCAACACAAGCATATACATCATATTCCAATGATGGTTTGGCTGTTAGTCCTCGTGGATTGAACTACGCTTTGCAAAATTTCCTTCCAAAAATGGCAACCGCTCAGAATTCTCTGTCTTTGGGTGGTGTTGTTGCTGGTGATTGGGTTCGCCGGACGGTTGCCCAAACAGTAACTGGTGCGATGACCTTCACCGCTGCCATGACTGCCAAGAATATTACATCTGAACTCACTTCGGTTTCAAGCCTGAAAGTTCGCGATGGTAACCTTGGGGCGATCGAGGTTGGAACACAAGGCGCAAACGTTCTTGGAACTGGGTTATTAATGCACGCGGCCAACGATACTGGTGTTGTAAATGACTGGTTTATGTATGCCGGCGGCCGATCCACTGTCCTTGGCGTCAATGAAATCGGTTTTGTTTCAGTTGGTCCTGATGGCAGCACTGGTTTGACTAAACAGTTCGCGGTGAGCCGTGATGGTGATGTTACTGCAAACCGTCATATCCGCTCAACCAATGGCTATTTGGTTCTAGAAAATTCAGGTGCCCGAATTTATTTGGGTGGCGGAATTGCTACAACTAACCAATTGGCTCAATCTGTTGTAGGTGGATTTGTTTTTGGCAATATTAACTCTGTTATGTCAGTTGTAACCAATGGTGATGATAACTTCAAAATCAACGGTTCTCCAGTCATTAATACTGCTAATGCTCAAACCAAGTTGGACCCAGTTTATCTGCGTCGCGATGGTGGAAACACTCAAACCGGTAAAGTTCTGGTTGCAATGAATGGTGATGTTAAATATAGCACCTTCCGAAACGATAACCGCTATATATCATCTCGTGGTAATGACTTTGTGTTTGGTAATACTGACACAGTAAATGGTCGCGTTTGTCTCGATACCAACAAGAACCCAATTGTTAAGATTGGAAACTTCGAATACGAGATTTACCACAAGGGTAACAAGCCAACGGCAGAAGATGTTGGTGCGGTAGATATTTCTGGGTCATCCGCCAACAACTTGACAATCCGTGACTGGATCAAGATTGGAAATGTGAAAATCATTGCTAATAACTTGACCAAGACTGTGGAATTTATTTGGGAAGAGTAA

Genome Context

Genome Context

Tertiary structure

PDB ID
fb1e507aa570566dc22f780e297aed28b4e9caddab0e86c700f47e4ed61ca541
ColabFold
Source ColabFold
Method ColabFold
Resolution 0,2725
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50

Literature

Title Authors Date PMID Source
Complete genome sequence of Aeromonas phage GomatiRiver_11 Sahoo,L., Parhi,J., Kalappa,G.S., Debnath,C. and Tripathy,P.S. 2023 — GenBank