Protein

View in Explore
Genbank accession
UVX29359.1 [GenBank]
Protein name
tail spike protein
RBP type
TF
Evidence Phold
Probability 1,00
Protein sequence
MSLETIKIADLPSATQVVEDDYFVVEQPDKTKKATVSQVISDLDLANKSSLTGPGGAAIIGTEDGQGVQKSLDTDRANTRELWRRALHDLGLTLVDGSFEEGAALTYTTDAIWHMSGAQCYTWSGTFPKSVPAG
Physico‐chemical
properties
protein length:134 AA
molecular weight: 14347,80060 Da
isoelectric point:4,54976
aromaticity:0,06716
hydropathy:-0,26642

Domains

Domains [InterPro]
DC_1918
ATT
1–133
DC_1918
G3DSA:2.10.10.80
ATT
92–134
G3DSA:2.10.10.80
IPR040775
RBD
97–134
IPR040775
UVX29359.1
1 134
Architecture
ATT
ATT 1-134
Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Taxonomy

  Name Taxonomy ID Lineage
Phage Klebsiella phage VLCpiM5b
[NCBI] 		2951234 Viruses > Duplodnaviria > Heunggongvirae > Uroviricota > Caudoviricetes
Host Klebsiella pneumoniae
[NCBI] 		573 cellular organisms > Bacteria > Pseudomonadati > Pseudomonadota > Gammaproteobacteria > Enterobacterales

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
UVX29359.1 [NCBI]
Genbank nucleotide accession
ON602729.1 [NCBI]
CDS location
range 51413 -> 51817
strand -
CDS
ATGTCATTAGAAACAATTAAAATTGCGGATCTACCCTCCGCAACTCAGGTGGTTGAAGACGACTACTTTGTTGTAGAACAGCCAGACAAGACCAAGAAGGCCACTGTCTCCCAGGTTATCTCAGATCTTGACTTGGCAAATAAATCATCCTTGACAGGACCTGGTGGGGCTGCTATTATCGGCACAGAGGATGGGCAGGGGGTCCAGAAGAGCCTTGATACCGATCGTGCAAATACAAGAGAACTTTGGAGAAGAGCGCTCCACGACCTTGGTTTGACACTTGTGGATGGTTCCTTTGAGGAAGGTGCGGCCCTTACTTACACAACCGATGCTATTTGGCACATGTCGGGGGCACAATGCTACACCTGGTCAGGTACTTTTCCAAAATCTGTACCTGCTGGGTAA

Genome Context

Genome Context

Tertiary structure

PDB ID
378bb3ccbcf38e9ceaeac6f57fec47779aa16f958fdf63106131469ba2957409
ColabFold
Source ColabFold
Method ColabFold
Resolution 0,5573
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50

Literature

Title Authors Date PMID Source
Genetic determinants of host tropism in Klebsiella phages Beamud,B., Garcia-Gonzalez,N., Gomez-Ortega,M., Gonzalez-Candelas,F., Domingo-Calap,P. and Sanjuan,R. — — GenBank