Protein

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Genbank accession
YP_010075520.1 [GenBank]
Protein name
tail fiber protein; host specificity
RBP type
TF
Evidence RBPdetect
Probability 0,85
Protein sequence
MAVVGVPGWIGSSAANETGQRWMSQAAGQLRLGVPCWMSQFAGRSREIIHTLGADHNFNGQWFRDRCFEAGSAPIVFNITGNLVSYSRDVPLFFMYGDTPNEYVQLNISGGAHMWGRGGQGGWTHSGGDGNGQQGGHCIQNDIGGRLRINNGGVICGGGGGGGGIAYRPHSGRRWQDIGGGGGRPFGPGGGGGYSGGAASYDGPGGGYNYGIAHSGQGGDAGANGQNAWHDGGQVLKVGAGGAAGYAVIGSAPTWQNVGAIYGPRV
Physico‐chemical
properties
protein length:266 AA
molecular weight: 27040,34920 Da
isoelectric point:8,39696
aromaticity:0,10150
hydropathy:-0,35301

Domains

Domains [InterPro]
IPR048291
ATT
1–42
IPR048291 IPR007932
DC_2135
STR
1–142
DC_2135
YP_010075520.1
1 266
Architecture
ATT
STR
RBD
ATT 1-42 | STR 43-142 | RBD 143-266
Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Taxonomy

  Name Taxonomy ID Lineage
Phage Salmonella phage pSe_SNUABM_01
[NCBI] 		2656520 Uroviricota > Caudoviricetes > Pantevenvirales > Tevenvirinae > Tequatrovirus
Host Salmonella enteritidis
[NCBI] 		149539 cellular organisms > Bacteria > Pseudomonadati > Pseudomonadota > Gammaproteobacteria > Enterobacterales

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
YP_010075520.1 [NCBI]
Genbank nucleotide accession
NC_054937 [NCBI]
CDS location
range 162311 -> 163111
strand +
CDS
ATGGCAGTAGTTGGTGTTCCTGGTTGGATTGGAAGTTCAGCCGCAAATGAAACAGGACAGCGCTGGATGAGTCAAGCGGCTGGTCAATTAAGATTGGGTGTTCCTTGCTGGATGAGTCAATTTGCAGGTCGCTCAAGAGAAATTATTCATACACTTGGAGCAGACCATAACTTTAATGGTCAATGGTTCCGAGATAGATGTTTTGAGGCAGGTAGTGCACCTATAGTGTTTAATATCACAGGAAATTTGGTATCATATTCTAGAGATGTTCCTTTATTCTTCATGTATGGAGATACACCAAATGAATATGTTCAGTTGAATATTAGCGGTGGAGCTCATATGTGGGGCAGAGGTGGACAAGGTGGATGGACTCATTCTGGTGGAGATGGTAATGGTCAACAGGGTGGACATTGTATTCAAAATGACATTGGTGGTCGATTAAGAATTAATAATGGTGGAGTAATTTGTGGCGGTGGTGGCGGTGGTGGCGGTATCGCTTATCGTCCTCACTCTGGACGCAGGTGGCAAGATATTGGTGGCGGTGGAGGAAGACCATTTGGCCCAGGAGGAGGCGGAGGTTATTCCGGTGGCGCAGCTTCTTATGATGGCCCAGGAGGTGGTTATAATTATGGTATTGCTCACTCTGGCCAGGGTGGTGATGCTGGCGCAAATGGACAAAATGCCTGGCATGATGGCGGTCAAGTTCTAAAAGTTGGAGCTGGTGGCGCTGCCGGATATGCTGTTATAGGATCAGCTCCAACATGGCAAAATGTTGGAGCAATATATGGTCCAAGAGTATAA

Genome Context

Genome Context

Tertiary structure

PDB ID
51737f4272f0a91a65e1299b579648df12858e7c1022d3bd2d3189e97099a8cf
ESMFold
Source ESMFold
Method ESMFold
Resolution 0,8178
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50

Literature

Title Authors Date PMID Source
Complete genome sequence of bacteriophage pSe_SNUABM_01 infecting Salmonella enterica Kim,S.G., Lee,C.H. and Park,S.C. 2012-01-15 — GenBank