Protein

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Genbank accession
AFU63893.1 [GenBank]
Protein name
tail fiber protein
RBP type
TF
Evidence UniProt/TrEMBL
Probability 1,00
TF
Evidence Phold
Probability 1,00
Protein sequence
MKLTTEQKVQLRETLKAVLSNGESQVVFEKADGTIRSMRCTRDRDILPSDFELVKESQVKRKEAVDMLPVYDTESEGWRAFSFDKLISVNGVKAEHLVQLVTQ
Physico‐chemical
properties
protein length:103 AA
molecular weight: 11773,33820 Da
isoelectric point:5,85211
aromaticity:0,05825
hydropathy:-0,43981

Domains

Domains [InterPro]
IPR024401
STR
13–87
IPR024401
AFU63893.1
1 103
Architecture
STR
STR 13-87 |
Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Taxonomy

  Name Taxonomy ID Lineage
Phage Salmonella phage STML-198
[NCBI] 		1204531 Uroviricota > Caudoviricetes > Pantevenvirales > Tevenvirinae > Gelderlandvirus
Host Salmonella
[NCBI] 		590 cellular organisms > Bacteria > Pseudomonadati > Pseudomonadota > Gammaproteobacteria > Enterobacterales

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
AFU63893.1 [NCBI]
Genbank nucleotide accession
JX181825.1 [NCBI]
CDS location
range 4764 -> 5075
strand -
CDS
ATGAAACTTACAACTGAACAAAAAGTACAACTTCGTGAAACTCTGAAAGCCGTGTTGAGTAATGGCGAATCTCAGGTGGTTTTTGAAAAAGCAGACGGAACCATTCGTTCAATGCGTTGCACTCGTGACCGAGATATTCTTCCTAGTGATTTTGAATTAGTCAAAGAATCTCAAGTTAAACGAAAAGAAGCTGTTGATATGCTTCCAGTTTATGACACGGAAAGTGAAGGTTGGCGCGCCTTTAGTTTTGATAAACTAATTTCTGTTAATGGCGTAAAGGCTGAACATTTGGTCCAATTGGTTACTCAGTAA

Genome Context

Genome Context

Tertiary structure

PDB ID
972fa434f0ddcb2bf54321a2edb3aa4647dfbbf1d188696254a670ee7d3632de
ESMFold
Source ESMFold
Method ESMFold
Resolution 0,7957
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50

Literature

Title Authors Date PMID Source
Bacteriophages quickly and effectively reduce contamination of various foods with Salmonella Woolston,J., Parks,A.R., Hanna,L.F., Charbonneau,D. and Sulakvelidze,A. 2016-07-02 — GenBank