Protein

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Genbank accession
QMV34404.1 [GenBank]
Protein name
putative short transient receptor potential channel 6 isoform X1
RBP type
TF
Evidence RBPdetect
Probability 0,85
Protein sequence
MFKFCDGYDHYAEIGVKGTALQGYLEAAGYVVRNASDTTFSVVEGRRTGARALKFTVAASSSVNASLSWGFTTTASSVVFGFAMKAGLSRMRIARIENIVDIEWDTTTGKIRVGEELGVNPLILNAWYYFEIEIDKAANTVKVYANNELQLTVTPSSAPTTTYTIVWGQTGTAPNAGEQTLDDFYVIDGSGSRNNARLTPVEVTSRMPTADVSTQWEVVNASSATPHYQIVSQLSPGGESKPYLQSNTAGATDMYRSNVTLPNNNQIFAVSVIAYARKGDLDDRKLGLVVNTEGGTPTEIQVPLTESYKYYQASFEQAPGGSDWNQNNVESLQFGIITR
Physico‐chemical
properties
protein length:339 AA
molecular weight: 36838,53920 Da
isoelectric point:4,95849
aromaticity:0,10029
hydropathy:-0,23894

Domains

Domains [InterPro]

No domain annotations available.

Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Taxonomy

  Name Taxonomy ID Lineage
Phage Salmonella phage vB_SentM_sal3
[NCBI] 		2743966 Viruses > Duplodnaviria > Heunggongvirae > Uroviricota > Caudoviricetes
Host Salmonella typhimurium
[NCBI] 		90371 cellular organisms > Bacteria > Pseudomonadati > Pseudomonadota > Gammaproteobacteria > Enterobacterales

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
QMV34404.1 [NCBI]
Genbank nucleotide accession
MT499898 [NCBI]
CDS location
range 37881 -> 38900
strand +
CDS
ATGTTTAAATTCTGTGACGGGTACGACCACTATGCCGAAATCGGCGTGAAGGGTACGGCCCTACAAGGCTATCTGGAAGCCGCCGGGTACGTGGTGCGTAACGCCAGCGATACCACCTTTTCCGTTGTCGAGGGCCGCCGGACAGGTGCGCGTGCGCTGAAATTCACCGTGGCCGCCAGTTCATCGGTCAACGCCTCACTGTCATGGGGATTCACCACGACGGCCTCGTCAGTCGTCTTCGGATTTGCCATGAAAGCCGGGCTGTCCCGTATGCGTATCGCGCGTATCGAGAACATCGTGGACATCGAGTGGGACACCACGACCGGGAAAATCCGCGTAGGGGAAGAGTTGGGCGTGAACCCGCTGATCCTGAACGCATGGTACTACTTCGAAATCGAGATCGATAAGGCGGCCAACACCGTCAAGGTCTACGCGAATAACGAATTGCAGTTAACGGTTACGCCATCGAGTGCGCCGACCACCACGTACACAATCGTTTGGGGGCAGACGGGTACCGCACCTAATGCGGGCGAACAGACACTGGATGACTTCTACGTGATCGATGGTTCCGGTAGCCGCAACAACGCGCGACTGACTCCGGTAGAAGTGACCAGCCGTATGCCGACGGCCGACGTTTCTACGCAGTGGGAAGTCGTGAACGCCTCGTCTGCCACGCCGCACTATCAGATCGTGTCACAGCTTTCCCCGGGTGGCGAGTCGAAGCCATACCTGCAATCGAACACCGCAGGGGCCACCGACATGTACCGCTCGAACGTGACGCTGCCGAACAATAACCAGATCTTCGCGGTGTCCGTCATCGCGTATGCCCGTAAAGGCGACCTCGATGATCGTAAACTCGGGCTGGTGGTCAATACGGAAGGCGGAACGCCGACTGAAATTCAGGTGCCGCTTACCGAGTCGTACAAGTATTATCAGGCATCGTTCGAGCAAGCGCCGGGCGGAAGTGACTGGAACCAGAACAACGTCGAATCTTTGCAATTCGGCATCATCACTCGATAA

Genome Context

Genome Context

Tertiary structure

PDB ID
78909bfdc687c9cef9cb25dd6b292bda99dd07cc2088d256ad99142590edcbb4
ESMFold
Source ESMFold
Method ESMFold
Resolution 0,9022
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50

Literature

Title Authors Date PMID Source
Identification and Characterization of Three Lytic Bacteriophages Specific for Salmonella enterica Typhimurium With Potential for Bio-control El-Arabi,T.F., Sharaf,A., Kourany,A.A. and Othman,B.A. 2025-02-08 — GenBank