Protein

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Genbank accession
AFH14769.1 [GenBank]
Protein name
tail fiber protein
RBP type
TF
Evidence GenBank
Probability 1,00
TF
Evidence Phold
Probability 1,00
TF
Evidence RBPdetect
Probability 0,89
Protein sequence
MTGEKVVALPFTSIDAPGYEGEQAFRDNSSQVYFGTPVDRRALRTVEAVFNDETGVLTFYRQNGKSYEITSLMRQIDFGIGPTGPRGDPGRPGRDAEDGKDGKDGQAGCAGPRGPEGRPGPMGDPGIEGEVGAPGPYGPLGPTGPRGDIGFAGPPGFEGKRGLCGFSCPTTSRGPCGPQGNTMNKNVAIGPYPTHLDLIWAAAEDCLCPVYPNEYDLTPITNNPAVFQ
Physico‐chemical
properties
protein length:228 AA
molecular weight: 23923,31370 Da
isoelectric point:4,73585
aromaticity:0,08333
hydropathy:-0,56623

Domains

Domains [InterPro]
DC_1842
ATT
4–79
DC_1842 IPR008160
PTHR24637
Unmapped
75–209
PTHR24637
DC_2050
STR
111–224
DC_2050
AFH14769.1
1 228
Architecture
ATT
STR
ATT 4-79 | STR 81-224 |
Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Taxonomy

  Name Taxonomy ID Lineage
Phage Pseudomonas phage Lu11
[NCBI] 		1161927 Viruses > Duplodnaviria > Heunggongvirae > Uroviricota > Caudoviricetes
Host Pseudomonas putida
[NCBI] 		303 cellular organisms > Bacteria > Pseudomonadati > Pseudomonadota > Gammaproteobacteria > Pseudomonadales

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
AFH14769.1 [NCBI]
Genbank nucleotide accession
JQ768459.1 [NCBI]
CDS location
range 185187 -> 185873
strand +
CDS
ATGACCGGTGAAAAGGTTGTGGCTTTGCCTTTCACCAGCATTGACGCGCCGGGCTATGAAGGCGAACAGGCATTCCGCGATAACAGCAGCCAAGTTTATTTTGGAACGCCTGTAGACCGCCGAGCGCTGCGCACCGTTGAGGCTGTTTTTAACGATGAAACCGGCGTACTGACTTTCTATCGGCAGAACGGGAAAAGTTACGAAATCACTTCGCTAATGCGGCAGATTGATTTCGGTATCGGTCCCACTGGGCCGCGTGGTGATCCGGGGCGTCCGGGGCGTGATGCCGAAGATGGAAAAGATGGAAAAGATGGGCAAGCAGGCTGCGCAGGTCCACGCGGGCCAGAAGGGCGCCCCGGTCCTATGGGTGATCCCGGTATTGAAGGCGAAGTAGGTGCGCCCGGTCCATACGGTCCGCTAGGTCCAACCGGACCGCGTGGTGATATTGGTTTTGCTGGTCCTCCCGGTTTTGAAGGTAAGCGCGGATTGTGTGGTTTTTCTTGCCCCACAACTTCACGCGGACCGTGTGGGCCACAAGGCAATACCATGAACAAAAACGTTGCGATTGGACCGTATCCAACGCACCTCGATTTGATTTGGGCGGCAGCAGAGGATTGTTTGTGTCCGGTTTATCCGAACGAATATGATCTGACTCCTATTACCAATAACCCGGCTGTGTTCCAGTGA

Genome Context

Genome Context

Tertiary structure

PDB ID
f5a34619053e62ea63cc961f45ac46a0e8019427f49d8818676457fcb2a33acf
ESMFold
Source ESMFold
Method ESMFold
Resolution 0,5862
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50