Protein

View in Explore
Genbank accession
XNO96303.1 [GenBank]
Protein name
tail fiber protein
RBP type
TF
Evidence Phold
Probability 1,00
Protein sequence
MNLVKFTYKDDAKKRERRGVIAQQVRNIDSCYVKESNASYQDDEGNVVENKKLVLDNNALLLDAICAIKALSAQVDELKEEIKNLKG
Physico‐chemical
properties
protein length:87 AA
molecular weight: 9843,10800 Da
isoelectric point:6,25640
aromaticity:0,04598
hydropathy:-0,57471

Domains

Domains [InterPro]
IPR030392
CHP
1–29
IPR030392 Coil
IPR030392
CHP
1–82
IPR030392
DC_0247
RBD
1–87
DC_0247
XNO96303.1
1 87
Architecture
RBD
RBD 1-87
Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Taxonomy

  Name Taxonomy ID Lineage
Phage Klebsiella phage Roth47
[NCBI] 		3384128 Viruses >
Host Klebsiella sp.
[NCBI] 		576 cellular organisms > Bacteria > Pseudomonadati > Pseudomonadota > Gammaproteobacteria > Enterobacterales

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
XNO96303.1 [NCBI]
Genbank nucleotide accession
PQ657808.1 [NCBI]
CDS location
range 29489 -> 29752
strand -
CDS
ATGAATCTTGTCAAGTTCACCTATAAGGATGATGCTAAGAAACGCGAGCGTAGGGGGGTTATTGCACAGCAGGTGAGAAATATCGATTCGTGCTACGTTAAAGAAAGCAACGCATCCTATCAGGATGATGAGGGTAACGTAGTTGAAAATAAGAAACTTGTGCTTGACAATAACGCGCTTTTGTTGGATGCAATTTGCGCAATCAAAGCTCTGTCTGCGCAAGTAGATGAACTGAAAGAGGAGATCAAGAATCTGAAGGGGTAA

Genome Context

Genome Context

Tertiary structure

PDB ID
336dc7750e7feda267331e4b60d958f9743a07ebb77bd3993306d9fe6fea0205
ESMFold
Source ESMFold
Method ESMFold
Resolution 0,8585
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50

Literature

Title Authors Date PMID Source
KlebPhaCol: A community-driven resource for Klebsiella research identified a novel gut phage order associated with the human gut Rothschild-Rodriguez,D., Lambon,K.S., Latka,A., Costa,A.R., Mantzouratou,A., King,C., Boeckaerts,D., Sheridan,E., Merrik,F., Drobniewski,F., De Angelis,I., Saeed,K., Sutton,M., Wand,M., Andrew,M., Hedges,M., Brouns,S.J.J., Haas,P.-J., Krishnakant Kushwaha,S., Lawson,S., Fordham,S., Lee,Y.-J., Wu,Y., Briers,Y., Weigele,P. and Nobrega,F.L. 2024 — GenBank