Protein

View in Explore
Genbank accession
AAS77196.1 [GenBank]
Protein name
receptor-binding tail protein
RBP type
TSP
Evidence DepoScope
Probability 1,00
TSP
Evidence RBPdetect
Probability 0,91
Protein sequence
MSFFAGKLNNKSILSLRRGSGGDTNQHINPDSQTIFHSDMSHVIITETHSTGLRLDQGAGDYYWSEMPSRVTQLHNNDPNRVVLTEIEFSDGSRHMLSGMSMGVGAKAYGIINPQIMSQGGLKTQITASADLSLDVGYFNTGTSGTIPQKLRDGTGCQHMFGAFSGRRGFASSAMYLGGAALYKSAWSGSGYVVADAGTLTIPSDYVRHPGARNFGFNAIYVRGRSCNRVLYGMEGPNYTTGGAVQGASSSGALNFTYNPSNPESPKYSVGFARADPTNYAYWESMGDPNDSANGPIGIYSEHLGIYPSKITWYVTNLVYNGSGYNIDGGLFNGNDIKLSPREFIIKGVNVNNTSWKFINFIEKNFNVGNRADFRDVGCNLSKDSPSTGISGIATFGLPTTESNNAPSIKGGNVGGLHANVVSIYNFLPSASWYVSSNPPKIGNNYGDVWSENLLPLRLLGGSGSTILSGNIVFQGNGSVHVGTVGLDLNSSRNGAIVCTMEFIDDTWLSAGGIGCFNPTEMLSQGAEYGDSRFRIGGNTINKKLHQILSLPAGEYVPFFTIKGTVVNACKLQAAAYNPTPYWVSGLPGSVGQTGYYTLTYYMRNDGNNNISIWLDSSMSNIIGMKACLPNIKLIIQRLT
Physico‐chemical
properties
protein length:640 AA
molecular weight: 68725,13840 Da
isoelectric point:8,01937
aromaticity:0,10469
hydropathy:-0,22297

Domains

Domains [InterPro]
IPR059609
RBD
1–640
IPR059609
AAS77196.1
1 640
Architecture
RBD
RBD 1-640
Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Tail Spike Domain Segmentation

Tail Spike Domain Segmentation

This protein has been segmented into three structural domains: N-terminal, central domain, and C-terminal.

Domain Layout
N-terminal
Central
C-terminal
AAS77196.1
1 640
Domain Start End Length (AA) Confidence
N-terminal 1 158 158 0,0857
Central domain 159 357 200 0,3630
C-terminal 358 640 282 0,9417
Legend: N-terminal Central domain C-terminal
3D Structure with Domain Coloring

The structure is colored according to the domain segmentation: N-terminal (blue), Central (green), C-terminal (pink).

Domain Coloring
N-terminal
1-158
Central
159-357
C-terminal
358-640

Taxonomy

  Name Taxonomy ID Lineage
Phage Escherichia phage T5
[NCBI] 		2695836 Uroviricota > Caudoviricetes > Demerecviridae > Tequintavirus > Tequintavirus T5
Host Escherichia coli
[NCBI] 		562 cellular organisms > Bacteria > Pseudomonadati > Pseudomonadota > Gammaproteobacteria > Enterobacterales

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
AAS77196.1 [NCBI]
Genbank nucleotide accession
AY543070 [NCBI]
CDS location
range 108427 -> 110349
strand -
CDS
ATGAGTTTTTTCGCTGGCAAGCTAAATAACAAATCTATACTCTCACTGCGAAGGGGTAGTGGTGGAGATACTAACCAACATATCAACCCTGATTCCCAAACCATCTTTCATTCAGATATGTCGCACGTAATTATAACGGAAACTCATTCTACTGGATTAAGATTGGATCAGGGGGCTGGTGACTATTACTGGTCTGAAATGCCTAGTAGAGTTACACAGCTACATAATAATGACCCTAATAGAGTTGTATTAACAGAGATTGAGTTTTCTGATGGCTCTAGACATATGCTATCTGGCATGTCTATGGGAGTAGGTGCAAAAGCCTATGGTATTATAAATCCTCAGATTATGTCTCAGGGTGGATTAAAAACACAAATAACAGCTAGTGCCGATCTTTCACTTGATGTAGGTTATTTTAATACGGGTACTAGTGGCACTATACCACAAAAGTTAAGAGATGGCACAGGATGTCAACATATGTTCGGTGCTTTTAGTGGGAGAAGGGGGTTTGCATCAAGTGCAATGTACTTAGGTGGTGCTGCTCTTTACAAATCTGCGTGGAGTGGTTCCGGTTATGTGGTGGCTGATGCAGGAACCTTAACTATCCCTAGTGATTATGTTAGACACCCAGGAGCTAGGAACTTTGGTTTTAATGCTATATACGTTCGTGGTAGGTCTTGTAATAGGGTTCTTTATGGTATGGAAGGACCAAACTATACTACCGGTGGGGCTGTGCAGGGAGCTTCGAGCTCTGGAGCCCTTAACTTTACGTATAACCCCAGTAATCCAGAATCACCAAAGTATTCCGTAGGTTTCGCACGTGCTGATCCTACTAACTATGCTTACTGGGAAAGTATGGGAGATCCTAATGATTCTGCCAATGGACCTATAGGTATCTACAGCGAACATTTAGGCATTTATCCATCTAAAATTACATGGTATGTTACTAACCTAGTATACAATGGTTCTGGGTATAATATAGACGGTGGGTTATTTAACGGTAATGACATTAAGCTCAGCCCAAGAGAATTTATTATTAAAGGGGTTAATGTTAATAATACATCTTGGAAATTTATTAATTTTATAGAGAAAAATTTCAACGTTGGTAACAGAGCTGATTTTCGTGATGTTGGTTGTAATCTAAGTAAAGATTCTCCCTCAACAGGAATATCAGGTATAGCAACATTTGGGCTACCAACCACAGAGAGCAATAATGCTCCTAGTATTAAAGGTGGTAATGTTGGTGGCTTACATGCTAATGTTGTTAGTATTTATAATTTTTTACCTTCAGCATCTTGGTATGTATCTAGTAATCCACCAAAAATAGGTAATAACTATGGCGACGTTTGGAGTGAGAATTTATTACCATTAAGACTCCTGGGAGGTAGTGGTAGCACTATATTATCTGGAAACATAGTATTCCAGGGTAATGGATCTGTACATGTTGGTACTGTGGGGTTAGATCTTAATAGCAGTAGAAATGGTGCTATTGTATGTACTATGGAGTTTATAGATGATACATGGCTATCCGCAGGCGGTATTGGTTGCTTCAATCCTACAGAAATGTTATCCCAAGGGGCAGAATACGGTGATAGTAGATTTAGGATAGGGGGGAATACCATAAATAAAAAACTGCATCAAATACTATCTCTACCAGCCGGAGAATACGTTCCATTCTTTACTATAAAAGGTACAGTTGTAAACGCTTGTAAATTGCAGGCTGCTGCGTATAATCCAACACCATATTGGGTATCTGGGTTGCCTGGATCTGTTGGGCAAACAGGATACTATACTCTAACTTACTATATGAGAAATGATGGAAATAATAATATCTCTATTTGGTTAGATTCTTCCATGAGTAATATAATTGGCATGAAAGCATGCTTACCTAATATTAAACTTATAATTCAACGCCTTACCTAA

Genome Context

Genome Context

Tertiary structure

1 / 3
PDB ID
Source
Method
Resolution
Oligomeric State

Literature

Title Authors Date PMID Source
Virus-induced acquisition of metabolic function. VI. Dihydrofolate reductase, a new phage-induced enzyme Methews,C.K. and Cohen,S.S. 1963 — GenBank
Replication of linear duplex DNA in vitro with bacteriophage T5 DNA polymerase Fujimura,R.K., Das,S.K., Allison,D.P. and Roop,B.C. 1981 — GenBank
The nucleotide sequence of bacteriophage T5 RNAI Kryukov,V.M., Shlyapnikov,M.G., Kazantsev,S.I., Kaliman,A.V., Ksenzenko,V.N. and Bayev,A.A. 1982 — GenBank
Structure of two promoters and a terminator of transcription from the region of bacteriophage T5 early genes D10-D15 Kaliman,A.V., Krutilina,A.I. and Kryukov,V.M. 1987 — GenBank
Amino acid sequence of the bacteriophage T5 gene A2 protein Snyder,C.E. Jr. 1991 — GenBank
Structure peculiarities of transfer RNAs coded by bacteriophage T5 Shlyapnikov,M.G. and Ksenzenko,V.N. 1994 — GenBank
Characterization of the bacteriophage T5 site-specific endonucleases F-TflV and F-TflVI Akulenko,N.V., Shaloiko,L.A., Shlyapnikov,M.G., Krutilina,A.I. and Ksenzenko,V.N. 2004-07 — GenBank
Identification of genes encoding bacteriophage T5 terminase and portal protein Kaliman,A.V., Ganichkin,O.M., Vasiliev,V.D. and Ksenzenko,V.N. 1996-01 — GenBank
Identification and characterization of novel site-specific endonucleases F-TflI, F-TflII and F-TflIV encoded by the bacteriophage T5 Ksenzenko,V.N., Akulenko,N.V., Kaliman,A.V., Kanapin,A.A., Shestakova,N.M., Shaloiko,L.A., Krutilina,A.I., Ivashina,T.V. and Shlyapnikov,M.G. 2004-07 — GenBank
Identification and characterization of bacteriophage T5 lysis genes Mikoulinskaia,G.V. and Zimin,A.A. 2015-01-19 — GenBank