Protein

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Genbank accession
AUR93269.1 [GenBank]
Protein name
coil containing protein
RBP type
TSP
Evidence RBPdetect
Probability 0,63
Protein sequence
MGWNNGGIAGGGAGFELGPAQNVFTGADRVAAELERDTYATANPSWLADYEVTTGVKPNIRLEFLDGTDQAVVYQVRNSDGTAWADNESFVAIKGNTGDSDISNVDDGQIPVKDGEVLVSSGMQKLPNGQILAPKNFGVESASIDFGDVITVSEQSSFLGIHDNSNGQSYIVVDFERNRDEPSRSPRIFTSTEAEVSEVVQADDSTELTGTSLTFDYTTTLTAYTNSITLRAQSEMTNVRIKIAPQGSSVGLKYIPQKSSWISEAEGLTLTAGDNEIDLFDSSLALESGTTLTVEIRADAISLLGSASGIPYLSVKKQDASFKSLVVKGAPVGVLDGETLAVQPNSSISASFTDPATTETITLNLDDGNHSGDEIEFVFANNLGTNTVVFNASSDIGFFDTNSNTFVFSSQLTLTGRSARVVFEWYGNDWRIIR
Physico‐chemical
properties
protein length:434 AA
molecular weight: 46357,27490 Da
isoelectric point:4,21435
aromaticity:0,08295
hydropathy:-0,19977

Domains

Domains [InterPro]

No domain annotations available.

Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Tail Spike Domain Segmentation

Tail Spike Domain Segmentation

This protein has been segmented into three structural domains: N-terminal, central domain, and C-terminal.

Domain Layout
N-terminal
Central
C-terminal
AUR93269.1
1 434
Domain Start End Length (AA) Confidence
N-terminal 1 190 190 0,9058
Central domain 191 389 200 0,1391
C-terminal 390 434 44 0,6025
Legend: N-terminal Central domain C-terminal
3D Structure with Domain Coloring

The structure is colored according to the domain segmentation: N-terminal (blue), Central (green), C-terminal (pink).

Domain Coloring
N-terminal
1-190
Central
191-389
C-terminal
390-434

Taxonomy

  Name Taxonomy ID Lineage
Phage Vibrio phage 1.186.O._10N.286.49.E3
[NCBI] 		1881255 No lineage information
Host Vibrio cyclitrophicus
[NCBI] 		47951 cellular organisms > Bacteria > Pseudomonadati > Pseudomonadota > Gammaproteobacteria > Vibrionales

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
AUR93269.1 [NCBI]
Genbank nucleotide accession
MG592552 [NCBI]
CDS location
range 17659 -> 18963
strand +
CDS
ATGGGTTGGAATAATGGAGGTATCGCCGGAGGTGGAGCTGGGTTTGAACTCGGCCCTGCTCAAAATGTATTTACGGGCGCGGATAGGGTGGCCGCTGAGCTAGAACGCGACACATACGCGACTGCAAATCCCTCATGGCTTGCTGATTACGAAGTCACGACCGGAGTTAAGCCAAATATACGCTTAGAGTTTTTAGACGGAACCGATCAGGCAGTTGTTTATCAGGTTAGAAATAGTGATGGCACTGCATGGGCTGATAATGAGAGTTTTGTAGCAATTAAAGGCAATACTGGTGATTCTGATATTAGCAATGTCGATGATGGTCAGATACCGGTAAAAGATGGTGAGGTTCTTGTTTCGTCTGGTATGCAAAAACTACCTAATGGTCAGATTCTAGCGCCTAAGAACTTCGGGGTTGAGTCTGCATCAATTGACTTTGGTGATGTCATTACAGTGTCTGAGCAAAGCTCGTTCCTTGGTATTCATGACAACTCAAACGGGCAAAGTTATATCGTTGTGGATTTTGAGCGAAACCGCGACGAGCCATCTCGCAGTCCTAGAATATTTACATCTACAGAGGCTGAAGTATCAGAGGTAGTTCAAGCTGACGATTCGACAGAGTTAACCGGCACTTCACTAACGTTCGATTACACAACCACCCTAACAGCTTACACGAACTCAATTACACTTCGAGCTCAGTCAGAGATGACCAACGTTCGAATTAAGATCGCTCCGCAAGGTAGCTCGGTCGGTCTAAAGTACATCCCGCAAAAATCGTCTTGGATATCAGAAGCGGAAGGTTTAACACTAACCGCCGGTGATAATGAGATCGACTTGTTTGATTCATCGCTTGCGCTGGAGTCAGGCACCACATTAACTGTTGAGATTCGAGCGGATGCTATTTCATTGCTAGGCTCTGCTTCAGGCATTCCATATCTGTCAGTTAAAAAACAGGACGCCAGCTTTAAGTCGTTGGTGGTTAAAGGTGCTCCAGTCGGCGTATTGGATGGCGAGACTCTAGCAGTTCAGCCAAACTCAAGCATTAGCGCATCGTTCACAGACCCTGCGACAACGGAAACAATCACGCTAAACCTGGATGACGGCAACCACTCAGGCGATGAAATTGAATTTGTATTTGCTAACAACCTGGGCACAAACACAGTTGTATTCAACGCTAGTTCAGATATTGGATTCTTTGACACTAACAGCAACACGTTTGTATTTTCATCTCAACTAACGCTTACGGGTCGATCTGCTAGGGTTGTTTTTGAGTGGTACGGTAACGATTGGAGAATTATACGATGA

Genome Context

Genome Context

Tertiary structure

PDB ID
a2e9b54c221f3f8c24005b35b8d958fcf4d7c78fa88b7e0c66c381fde4111701
ESMFold
Source ESMFold
Method ESMFold
Resolution 0,6192
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50

Literature

Title Authors Date PMID Source
A major lineage of nontailed dsDNA viruses as unrecognized killers of marine bacteria Kauffman,K.M., Hussain,F.A., Yang,J., Arevalo,P., Brown,J.M., Chang,W.K., VanInsberghe,D., Elsherbini,J., Cutler,M.B., Kelly,L. and Polz,M.F. 2018-01-24 — GenBank