Protein

View in Explore
Genbank accession
QXV84028.1 [GenBank]
Protein name
tail fiber protein
RBP type
TF
Evidence Phold
Probability 1,00
TF
Evidence RBPdetect
Probability 0,87
Protein sequence
MATVTVIPSDITKLKNDVSTINQDVSTLKQDVAGKASTTDVENKLKPYLKQTDLSSELESGRYSGSFYPLTGNEAFYLFRLNTTAQSANLWLDPNAGVSQVLRSTSSSRYKRSVESVIDEYADLMLEMRPVWYRSTCESDRKDWGWYGLIAEEVGEVAPEYVHWRPLQEGEDPAIASSNGMVAEGVMYDRLTVPLIHHVKNLKAENEEMRKEIDELKAVVAALVNKPTTLD
Physico‐chemical
properties
protein length:231 AA
molecular weight: 25898,81000 Da
isoelectric point:4,91216
aromaticity:0,07792
hydropathy:-0,43680

Domains

Domains [InterPro]
G3DSA:1.20.5.190
STR
2–46
G3DSA:1.20.5.190 IPR030392
DC_0536
STR
4–231
DC_0536
Coil
Unmapped
11–31
Coil Coil
QXV84028.1
1 231
Architecture
STR
STR 2-231
Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Taxonomy

  Name Taxonomy ID Lineage
Phage Escherichia phage PeterMerian
[NCBI] 		2851958 Viruses > Duplodnaviria > Heunggongvirae > Uroviricota > Caudoviricetes
Host Escherichia coli K-12
[NCBI] 		83333 Bacteria > Proteobacteria > Gammaproteobacteria > Enterobacteriales > Enterobacteriaceae > Escherichia

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
QXV84028.1 [NCBI]
Genbank nucleotide accession
MZ501101.1 [NCBI]
CDS location
range 24025 -> 24720
strand -
CDS
ATGGCTACAGTAACTGTTATACCTAGTGATATAACGAAGCTAAAAAATGATGTTTCTACGATAAATCAGGATGTTTCGACACTAAAACAGGATGTTGCCGGAAAAGCATCAACTACTGATGTTGAAAATAAATTGAAACCGTATCTAAAACAAACTGATCTATCATCCGAGTTGGAAAGCGGAAGGTATAGTGGCAGTTTTTACCCCCTGACTGGTAACGAGGCATTTTATTTGTTTAGACTCAACACAACCGCTCAATCAGCAAACTTATGGCTTGATCCAAATGCTGGAGTTTCGCAAGTTTTACGCTCCACTTCCTCTTCTCGTTATAAGCGCAGCGTAGAATCGGTTATTGATGAATATGCGGATCTGATGCTTGAAATGCGTCCTGTGTGGTATCGGTCAACTTGTGAAAGCGACCGTAAAGATTGGGGATGGTACGGACTGATTGCAGAGGAAGTTGGAGAGGTTGCGCCGGAGTACGTTCACTGGCGACCGCTGCAAGAAGGAGAAGATCCTGCCATTGCTTCAAGTAATGGCATGGTGGCGGAAGGCGTTATGTATGACCGCCTCACTGTTCCACTGATTCACCACGTCAAGAATCTGAAAGCGGAAAATGAGGAGATGAGAAAAGAAATTGACGAGCTAAAAGCGGTTGTAGCGGCACTGGTAAACAAACCAACCACGTTAGACTAA

Genome Context

Genome Context

Tertiary structure

PDB ID
c1a4e9f61b04c0f7127d7a3d3da4e8fb8a9f1644daa6db06ea95245f7ed1b057
ESMFold
Source ESMFold
Method ESMFold
Resolution 0,7911
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50

Literature

Title Authors Date PMID Source
Systematic exploration of Escherichia coli phage-host interactions with the BASEL phage collection Maffei,E., Shaidullina,A., Burkolter,M., Heyer,Y., Estermann,F., Druelle,V., Sauer,P., Willi,L., Michaelis,S., Hilbi,H., Thaler,D.S. and Harms,A. 2021 — GenBank