Protein

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Genbank accession
UPW37966.1 [GenBank]
Protein name
hypothetical protein
RBP type
TSP
Evidence RBPdetect
Probability 0,90
Protein sequence
MADLKLGSTAGGSVLWHQGNFPLTPVSNDVYYKTYKIYSEFNKPKAADNDFVSKASGGNYLSVVGFDKDLQFKDTDGYWVKLGRKVNNSPMSAAYSFSFRMSKGMGLETSDGTPFVIFDPSTVVGANRLTVMGDILGRHLKDESGRVFSPGNTPTKAQVGLSDVDNAKQVQINNTSLQTMAGVLSAPNFISRNPGTLNEHVPRIDQVVLRGTYEDFGYY
Physico‐chemical
properties
protein length:219 AA
molecular weight: 23931,57460 Da
isoelectric point:7,84866
aromaticity:0,10959
hydropathy:-0,36210

Domains

Domains [InterPro]

No domain annotations available.

Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Tail Spike Domain Segmentation

Tail Spike Domain Segmentation

This protein has been segmented into three structural domains: N-terminal, central domain, and C-terminal.

Domain Layout
N-terminal
Central
C-terminal
UPW37966.1
1 219
Domain Start End Length (AA) Confidence
N-terminal 1 42 42 0,6627
Central domain 43 208 167 0,1809
C-terminal 209 219 10 0,8835
Legend: N-terminal Central domain C-terminal
3D Structure with Domain Coloring

The structure is colored according to the domain segmentation: N-terminal (blue), Central (green), C-terminal (pink).

Domain Coloring
N-terminal
1-42
Central
43-208
C-terminal
209-219

Taxonomy

  Name Taxonomy ID Lineage
Phage Escherichia phage vB_EcoM_ESCO10
[NCBI] 		2918865 Viruses > Duplodnaviria > Heunggongvirae > Uroviricota > Caudoviricetes
Host No host information

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
UPW37966.1 [NCBI]
Genbank nucleotide accession
OM386655 [NCBI]
CDS location
range 143605 -> 144264
strand +
CDS
ATGGCTGATTTAAAATTAGGCTCTACAGCAGGTGGTTCAGTTCTTTGGCACCAAGGTAACTTTCCATTAACTCCTGTAAGCAACGACGTTTATTATAAAACGTATAAGATTTATTCTGAATTCAATAAACCTAAAGCCGCGGATAATGATTTCGTTTCTAAAGCTAGCGGTGGTAATTATTTAAGCGTTGTTGGATTTGATAAAGATTTACAGTTTAAAGACACCGATGGGTATTGGGTTAAATTAGGACGTAAAGTAAACAACTCTCCGATGTCGGCTGCATATTCTTTCTCTTTTAGAATGAGTAAAGGAATGGGTCTTGAGACATCTGATGGTACTCCATTTGTTATTTTCGACCCCAGTACAGTGGTCGGCGCAAACCGTCTTACTGTTATGGGCGATATTTTAGGTCGTCATCTTAAAGATGAATCTGGGAGAGTATTTTCACCGGGTAATACCCCTACTAAAGCTCAGGTAGGTTTAAGTGACGTAGACAACGCAAAACAGGTTCAAATAAATAATACTAGCTTACAGACAATGGCTGGTGTTTTGTCTGCACCAAATTTTATATCTAGGAACCCAGGTACATTGAACGAACACGTTCCTCGTATTGACCAGGTTGTTCTTAGAGGCACATACGAAGATTTTGGATATTATTAA

Genome Context

Genome Context

Tertiary structure

PDB ID
5e4ee9213a2263f65f55b36d03b1ab22a8dc9a08f9de5d1dfc8b139262d8093c
ESMFold
Source ESMFold
Method ESMFold
Resolution 0,5642
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50

Literature

Title Authors Date PMID Source
Avian Pathogenic Escherichia coli bacteriophages Nicolas,M., Trotereau,A. and Schouler,C. 2015-06 — GenBank