Protein

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Genbank accession
VFR13168.1 [GenBank]
Protein name
hypothetical protein
RBP type
TSP
Evidence RBPdetect
Probability 0,82
Protein sequence
MSIPYSGDAGPRPKSTYTPVDVEQLTRAICNVTWADLYNKGAIFDYRYAIKWLKFFLNGAVVFVPKELFTSDEMVYALYNGTTWPRPKGLMAGNELYGFFGLVSAGSCKMTYVYEPIAMYPKSGPEYATPETVTLTAHANSLCYTELNGLNLTASDITSPNVALMKMASIPRSAQTHAEALPAFNGEITVYYDRLNLASLFKSGPNVNGRNTQITLVGKPGKGFAGLAGKITADSIGVRGVPVAKRLYTEPSMELLCQQIVRDNPTQPRCSLLLN
Physico‐chemical
properties
protein length:275 AA
molecular weight: 30067,22600 Da
isoelectric point:8,68558
aromaticity:0,10545
hydropathy:-0,07782

Domains

Domains [InterPro]

No domain annotations available.

Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Tail Spike Domain Segmentation

Tail Spike Domain Segmentation

This protein has been segmented into three structural domains: N-terminal, central domain, and C-terminal.

Domain Layout
N-terminal
Central
C-terminal
VFR13168.1
1 275
Domain Start End Length (AA) Confidence
N-terminal 1 57 57 0,0042
Central domain 58 256 200 0,0411
C-terminal 257 275 18 0,9928
Legend: N-terminal Central domain C-terminal
3D Structure with Domain Coloring

The structure is colored according to the domain segmentation: N-terminal (blue), Central (green), C-terminal (pink).

Domain Coloring
N-terminal
1-57
Central
58-256
C-terminal
257-275

Taxonomy

  Name Taxonomy ID Lineage
Phage Salmonella phage SPFM12
[NCBI] 		2528682 Viruses > Duplodnaviria > Heunggongvirae > Uroviricota > Caudoviricetes
Host No host information

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
VFR13168.1 [NCBI]
Genbank nucleotide accession
LR535911 [NCBI]
CDS location
range 117064 -> 117891
strand +
CDS
ATGTCTATCCCGTATTCCGGAGACGCAGGACCTCGCCCGAAGTCGACTTACACACCTGTCGATGTTGAACAGTTGACCCGTGCGATTTGCAACGTTACCTGGGCAGACCTGTACAACAAGGGTGCAATATTTGATTACCGCTACGCTATCAAGTGGCTCAAATTCTTTCTGAATGGGGCGGTAGTGTTTGTTCCGAAAGAGTTATTCACATCTGATGAAATGGTGTATGCCCTCTATAACGGCACCACCTGGCCTAGGCCAAAAGGATTAATGGCTGGTAATGAGTTATACGGATTCTTTGGGCTGGTAAGCGCGGGGTCATGCAAGATGACCTATGTTTACGAACCGATTGCGATGTATCCGAAGTCGGGTCCTGAATACGCTACGCCGGAAACTGTAACTCTGACGGCGCACGCTAACTCCTTGTGTTATACCGAATTGAACGGGTTGAACTTAACCGCGAGTGATATCACCAGTCCAAACGTTGCATTAATGAAGATGGCGAGTATTCCACGTAGCGCACAAACCCATGCGGAAGCGTTACCGGCGTTCAATGGGGAAATAACGGTCTATTACGACCGGTTGAATCTGGCCAGTCTATTTAAGTCTGGCCCGAACGTTAACGGACGAAACACACAGATTACGTTGGTAGGTAAACCCGGTAAAGGATTTGCTGGTTTAGCAGGAAAAATCACCGCCGACTCCATTGGGGTCAGGGGTGTTCCTGTTGCGAAAAGGTTGTATACAGAACCTTCAATGGAACTGCTCTGCCAACAAATTGTGCGTGACAATCCCACGCAGCCACGATGTTCTTTGCTTTTGAATTAG

Genome Context

Genome Context

Tertiary structure

PDB ID
7771209c7063ac53ff9047a942276616e75599936d6c44f5790c21a8263f26da
ESMFold
Source ESMFold
Method ESMFold
Resolution 0,2801
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50