Protein

Genbank accession
YP_010745798.1 [GenBank]
Protein name
tail fibers protein
RBP type
TSP
Evidence DepoScope
Probability 1,00
TSP
Evidence RBPdetect
Probability 0,91
TSP
Evidence RBPdetect2
Probability 0,95
TF
Evidence Phold
Probability 1,00
Protein sequence
MSSGCGDVLSLNDLQIAKKHQIFEAEVITGKQGGVAGGADIDYATNQVTGQTQKTLPAVLRDAGFSPASFNFTTGGTLGVNDADKAVLWPKEDGGDGNYYAWRGPLPKVIPAASTPLTTDGISDSAWVAFGDITFRAEADKKFKYSVKLSDFTTLQQLADAAVDSVLIDRDYTFSNNETVNFSGKTLTIDCKAKFIGDGNLVFTQLGKGSIVIAPFMESATTPWVIKPWTDDNQWITDPAAIVATLKQSKTDGYQPTVNDYAKFPGIESLLPPEAKGQSISSTLEIRECTGVEVHRASGLMACFLFRGCHFCKMVDADNPSGGKDGVITFENLSGDWGKGNYVIGGRTSYGSVSSAQFLRNNGGFARDGGVIGFTSYRAGESGVKTWQGTVGSTTSRNYNLQFRDSAVLYPVWDGFDLGADTDMNPEDDRPGDFPYSQYPVHMLPLNHLIDNLLVRGSLGVGLGMDGQGLYVSNITVEDCAGSGAYLLTHETVFTNIAIIDTNTKDFPANQIYISGACRVNGLRLVGIRSTSGQGLTIDAPNSTVSGITGFVDPSRINVANLMEEGLGNSRINSFNNDSAALRLRIHKLSKTLDSASVYSHINGGPGSGSAWTEVTAISGSLPDAVSMKINRGDYRAVEIPVAVTVLPDAAVRDNGSISLYLEGDSLKALVKRADGSYTRLTLA
Physico‐chemical
properties
protein length:684 AA
molecular weight: 72895,69020 Da
isoelectric point:5,01095
aromaticity:0,08626
hydropathy:-0,16404

Domains

Domains [InterPro]
G3DSA:2.10.10.80
65–135
G3DSA:2.10.10.80 IPR011050
IPR040775
71–132
IPR040775 IPR012332
IPR015331
138–684
IPR015331
YP_010745798.1
1 684
Legend: Pfam SMART CDD TIGRFAM HAMAP SUPFAM PRINTS Gene3D PANTHER Other

Taxonomy

  Name Taxonomy ID Lineage
Phage Salmonella phage SE-W109
[NCBI] 		1897529 Viruses > Duplodnaviria > Heunggongvirae > Uroviricota > Caudoviricetes
Host No host information

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
YP_010745798.1 [NCBI]
Genbank nucleotide accession
NC_073170.1 [NCBI]
CDS location
range 18511 -> 20565
strand -
CDS
ATGTCCAGCGGTTGCGGTGATGTATTGTCACTTAATGATTTACAAATAGCTAAAAAACACCAGATTTTCGAAGCCGAGGTGATCACCGGTAAACAAGGCGGTGTAGCTGGTGGTGCGGATATCGACTACGCCACTAACCAGGTAACCGGGCAGACGCAGAAGACGCTTCCCGCAGTCTTACGTGATGCTGGTTTCTCCCCGGCATCTTTTAACTTTACGACTGGGGGTACTCTCGGCGTAAACGACGCGGATAAAGCAGTTCTTTGGCCGAAAGAAGATGGCGGGGACGGTAACTATTACGCATGGCGTGGCCCCCTGCCGAAAGTTATCCCTGCGGCGTCGACACCTCTTACGACAGACGGCATTTCGGATTCCGCTTGGGTCGCGTTCGGAGATATTACCTTTCGCGCGGAAGCGGATAAGAAATTTAAATACTCCGTTAAGCTGTCCGACTTTACTACGTTACAACAATTGGCGGATGCCGCCGTTGATAGCGTTCTTATCGACCGCGATTACACTTTCAGTAATAACGAGACCGTTAACTTCAGCGGGAAGACCCTGACCATCGACTGTAAAGCGAAGTTTATCGGCGACGGAAACCTGGTATTTACGCAATTAGGTAAAGGTTCCATTGTAATAGCCCCCTTTATGGAGAGTGCTACAACGCCGTGGGTGATTAAACCGTGGACCGACGATAATCAGTGGATAACCGACCCCGCGGCAATCGTGGCCACACTTAAACAGTCTAAAACAGATGGATACCAGCCGACGGTAAACGATTACGCCAAGTTTCCTGGTATAGAATCCCTTCTCCCTCCGGAAGCTAAAGGGCAAAGCATATCTTCTACCCTGGAAATTCGGGAATGTACAGGCGTCGAGGTTCACCGGGCGAGTGGTCTTATGGCGTGTTTCCTGTTCCGCGGATGCCATTTCTGTAAGATGGTAGACGCTGACAACCCGAGCGGCGGAAAAGATGGCGTAATTACCTTTGAAAACCTGAGCGGCGATTGGGGCAAGGGTAACTATGTTATTGGCGGGCGCACAAGTTACGGTTCGGTAAGTAGCGCTCAATTCTTACGAAACAATGGCGGTTTCGCGCGCGATGGCGGGGTCATCGGGTTTACTTCGTATCGTGCGGGGGAAAGTGGTGTTAAGACGTGGCAAGGTACGGTAGGTTCTACGACCTCTCGTAACTACAACCTGCAATTCCGGGATTCAGCAGTGCTATACCCTGTATGGGACGGCTTCGATTTAGGCGCAGATACTGACATGAACCCAGAAGATGACCGCCCGGGGGATTTCCCATATTCCCAATACCCGGTACATATGCTCCCTCTAAACCATTTAATTGACAATCTACTGGTTAGGGGTTCTTTGGGAGTAGGTTTAGGCATGGACGGGCAGGGCCTATATGTTTCAAATATAACTGTAGAGGATTGTGCAGGTTCGGGTGCGTATCTTCTTACTCACGAAACGGTATTCACTAATATCGCTATAATCGACACAAATACTAAAGATTTTCCAGCGAATCAGATATACATCTCCGGGGCCTGCCGTGTAAATGGCCTTCGTTTGGTAGGCATACGCTCTACTAGTGGGCAGGGGCTGACGATAGACGCTCCTAACTCCACTGTAAGCGGTATAACCGGTTTCGTTGACCCATCAAGAATCAATGTGGCCAATTTAATGGAGGAAGGTCTAGGAAACTCACGAATTAATAGTTTTAATAACGATTCTGCGGCGCTGCGGTTACGGATACATAAACTGTCAAAAACTTTAGATAGCGCTTCTGTGTATTCGCACATAAACGGCGGCCCTGGTTCGGGTTCCGCGTGGACAGAAGTCACGGCTATTTCTGGGTCTTTGCCGGATGCCGTGTCAATGAAAATCAACAGGGGCGACTACCGTGCAGTTGAGATACCAGTGGCCGTAACAGTTTTACCTGATGCCGCTGTTCGCGATAACGGGTCTATATCCCTGTATTTAGAGGGTGATAGCCTGAAGGCGTTAGTTAAGCGGGCGGACGGAAGTTATACAAGATTAACTTTGGCATAA

Gene Ontology

No Gene Ontology terms available.

Enzymatic activity

No enzymatic activity data available.

Tertiary structure

PDB ID
1360ed3adbfd834d69c1f7d0ba8619558bf925094cf0c8ea9680f3b4fa881e25
ESMFold
Source ESMFold
Method ESMFold
Resolution 0,6886
Evidence 0,6886
Download PDB

Literature

Title Authors Date PMID Source
Isolation and characterization of lytic bacteriophages SE-W109 which highly virulent against several Salmonella enterica subsp. enterica Korbsrisate,S. and Phothaworn,P. 2012 — GenBank