Protein

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Genbank accession
WWD13294.1 [GenBank]
Protein name
tail spike protein
RBP type
TF
Evidence Phold
Probability 1,00
TSP
Evidence DepoScope
Probability 1,00
TSP
Evidence RBPdetect
Probability 0,91
TSP
Evidence RBPdetect2
Probability 0,95
Protein sequence
MAIYDTGTASLAANGQVTGVGTQWTMPLTLIRVGATLVFKTEPVQIYTISEITSDTSLAVYNPNGETVPAGTGYAILAHDGISVQGLAQDVAETLRYYQSRETEVADAVDAFNNFDANEFSAKVAQVDTQHNEVVSIGAQVSNDAAQVSSDKDSASNSALSAINSASVAQSAAASVSGALVGSFQGGVTLEGDSQQIIDIENSSVYVWSGAFPKVVPQGSTPEGTGGIDDATGWRLLSNGRVLKNLENDNGSSMINFKLNNVSSVVRSVESKLGDFVNVMDFGATNNGSLVPLSSKFSTIEAARVVYPFASNLNESLDAVALQAAVNTGKTVYIPKGFMFINRTVRIGNSTRIIGEGTDQINRAQTFISVDGNINLFALVQGDAQNIRMYQIFIEGLYIFYNPGTTPTVASGNDQKIAFNFVSNVGSATGLENSCIKDCTVHGAWGCYTDTTGTYQTKLQNVWARNCRTGFIKATGTTMLLETCYASGCISPYEFGAVMSVTMINCAMDGSNISSTSGSYGGAGINFINSHSVNILGMDVEGNIIDTNGSQDCCLIRFNNSNGRISGLTGWKNEVRTTGAGSSGVVSYIKASGTSHVIIDSSEDSLDNDGLVYTGTGGYPVTIYAQDSASRIDILSGRFQSAKGGAPVISVVSQGNVNWFTEPMGGSIVGGYKQTYSSEGLKTDGVYTAKGSTVAQANVQAGLFELPNSAGLYKVCCWVQNAGTNYSVIADVLFDGTASSIIVTKTASFTTIDVSSRIVFITALGTATYRWTYTKIG
Physico‐chemical
properties
protein length:777 AA
molecular weight: 81712,98290 Da
isoelectric point:4,71090
aromaticity:0,08494
hydropathy:0,00746

Domains

Domains [InterPro]
DC_0313
STR
1–776
DC_0313
G3DSA:2.10.10.80
ATT
179–235
G3DSA:2.10.10.80 IPR012334
IPR040775
RBD
179–231
IPR040775 IPR011050
WWD13294.1
1 777
Architecture
STR
ATT
STR
STR 1-178 | ATT 179-235 | STR 236-776 |
Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Tail Spike Domain Segmentation

Tail Spike Domain Segmentation

This protein has been segmented into three structural domains: N-terminal, central domain, and C-terminal.

Domain Layout
N-terminal
Central
C-terminal
WWD13294.1
1 777
Domain Start End Length (AA) Confidence
N-terminal 1 317 317 0,9957
Central domain 318 668 352 0,9873
C-terminal 669 777 108 0,9737
Legend: N-terminal Central domain C-terminal
3D Structure with Domain Coloring

The structure is colored according to the domain segmentation: N-terminal (blue), Central (green), C-terminal (pink).

Domain Coloring
N-terminal
1-317
Central
318-668
C-terminal
669-777

Taxonomy

  Name Taxonomy ID Lineage
Phage Escherichia phage RobRod40
[NCBI] 		3098284 Viruses > Duplodnaviria > Heunggongvirae > Uroviricota > Caudoviricetes
Host Escherichia coli
[NCBI] 		562 cellular organisms > Bacteria > Pseudomonadati > Pseudomonadota > Gammaproteobacteria > Enterobacterales

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
WWD13294.1 [NCBI]
Genbank nucleotide accession
OR896835.1 [NCBI]
CDS location
range 26109 -> 28442
strand -
CDS
ATGGCAATTTATGATACTGGCACTGCCAGTTTAGCCGCTAACGGGCAAGTTACTGGTGTTGGTACTCAATGGACTATGCCGCTAACGCTTATTCGCGTTGGTGCTACATTGGTTTTTAAAACAGAGCCAGTACAGATTTACACTATCTCTGAAATCACTAGCGACACATCATTAGCTGTATACAATCCTAATGGTGAAACTGTTCCTGCTGGTACTGGTTACGCAATCCTTGCCCATGATGGAATTAGCGTTCAGGGACTGGCGCAGGATGTTGCAGAAACTCTTCGTTACTATCAGTCACGTGAAACTGAGGTTGCAGATGCTGTTGATGCTTTCAACAACTTTGATGCAAATGAATTTAGTGCTAAGGTTGCTCAGGTTGACACGCAGCATAATGAAGTGGTTTCAATTGGTGCGCAGGTTTCAAACGATGCCGCTCAGGTTTCAAGTGACAAAGATTCTGCTTCTAATTCCGCATTATCTGCAATCAACTCTGCAAGCGTCGCCCAGAGTGCGGCGGCATCAGTTTCAGGTGCTTTAGTTGGCAGCTTCCAGGGTGGAGTTACTCTCGAGGGTGATTCTCAGCAAATCATAGACATTGAAAACTCTTCTGTTTATGTGTGGTCTGGAGCATTCCCTAAGGTTGTCCCGCAAGGATCAACTCCAGAAGGAACTGGTGGTATAGATGATGCTACTGGATGGAGACTCCTTTCAAACGGAAGGGTTCTTAAAAATCTTGAGAATGATAATGGCTCATCAATGATTAACTTCAAGCTGAATAATGTATCATCAGTAGTTAGAAGCGTGGAATCAAAACTTGGTGATTTTGTTAACGTTATGGATTTCGGCGCCACAAACAACGGTAGTTTAGTTCCGCTATCATCTAAATTCTCTACAATTGAGGCTGCACGGGTTGTTTATCCGTTTGCATCAAACCTTAACGAGTCACTTGACGCAGTTGCGCTTCAGGCGGCGGTTAATACTGGCAAAACGGTATACATACCAAAAGGATTTATGTTTATTAACAGGACTGTAAGGATTGGCAACAGCACAAGAATTATTGGCGAGGGAACAGACCAAATTAACAGGGCGCAAACATTTATCTCAGTTGATGGTAACATCAACCTGTTTGCCTTGGTTCAGGGTGATGCACAAAACATAAGAATGTATCAAATATTTATTGAAGGTCTTTACATTTTTTATAATCCAGGAACCACACCTACCGTAGCATCAGGGAATGATCAAAAGATAGCATTTAACTTCGTTTCTAATGTTGGTTCTGCAACTGGTCTGGAAAATTCATGTATCAAAGATTGCACGGTACATGGAGCGTGGGGTTGTTACACGGATACCACTGGAACATACCAAACTAAGTTACAGAATGTTTGGGCCAGGAATTGCAGAACGGGATTCATCAAGGCGACTGGGACGACAATGTTGCTTGAGACTTGTTACGCATCAGGTTGCATTTCACCTTATGAATTTGGTGCAGTAATGAGCGTTACGATGATTAACTGCGCAATGGATGGAAGCAATATATCATCAACATCTGGCTCTTATGGTGGGGCTGGAATTAACTTCATCAACAGTCATAGTGTAAACATACTAGGGATGGACGTTGAAGGTAACATTATTGACACCAACGGTTCTCAGGATTGTTGCCTGATTAGGTTTAATAACTCAAATGGAAGAATTTCAGGCCTGACAGGATGGAAGAACGAAGTTAGAACAACTGGCGCAGGTTCTAGTGGTGTGGTTTCATATATCAAGGCTTCTGGAACTTCTCACGTCATTATTGACTCTTCGGAAGATTCTCTTGATAATGACGGCTTGGTTTACACTGGAACTGGTGGATACCCTGTAACTATCTACGCCCAGGACTCAGCATCTAGAATTGACATTTTAAGCGGCAGGTTCCAGTCAGCCAAAGGTGGCGCTCCTGTAATATCTGTTGTTAGTCAGGGTAATGTGAACTGGTTTACTGAACCTATGGGTGGTTCTATTGTTGGTGGTTATAAGCAGACCTACTCATCAGAAGGATTGAAGACTGATGGTGTTTATACGGCTAAAGGTTCAACGGTGGCGCAGGCAAACGTTCAAGCTGGTCTTTTTGAACTTCCTAACTCAGCAGGTCTTTATAAGGTTTGTTGCTGGGTGCAGAATGCTGGAACAAACTATAGCGTCATAGCTGATGTTCTCTTTGATGGAACCGCGTCATCAATTATAGTCACTAAGACGGCATCCTTTACAACAATTGATGTTAGCTCAAGGATTGTTTTTATAACTGCACTGGGTACAGCTACTTACAGATGGACTTACACTAAAATAGGTTAA

Genome Context

Genome Context

Tertiary structure

PDB ID
bf5aedba7ee45fa9deeb80ff62f92b36744155e0300abe00d1af02ee7eb94759
ColabFold
Source ColabFold
Method ColabFold
Resolution 0,3057
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50