Protein

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Genbank accession
UOF79366.1 [GenBank]
Protein name
sortilin
RBP type
TSP
Evidence DepoScope
Probability 1,00
Protein sequence
MDKLYSSFGKTLYTSSDYGQTWDAISINSNLDIVYLSLANKNYFIFRSDSGVIEGHSYNSMFGYQSIVSENDVLLCTNRVGSKIVIAGHDGNNVYTRVSLNEGLSYHGNSNFPVGILSLVPNGGTSSAIFWNGTKYVVLGPLQDGAFNTLTSPDGFVWTHQTAATPLDFRNVYSGFVYNSNVYYLNKVNGDSTSQVRLNHFNGVSAWTTLPNIVYGTGADNLDNIYSATNGTSSILMSVRDSSTGNYRLLRSTNGGTSWTTIIDYTAGSNPHYISSILRVNSNYVLEKVYTTSNTQTYSVSTNDGVTFTEYSEAINKGLPVVGPEDLGLFWKELILSTQS
Physico‐chemical
properties
protein length:340 AA
molecular weight: 37215,61770 Da
isoelectric point:5,27622
aromaticity:0,12353
hydropathy:-0,19412

Domains

Domains [InterPro]
IPR036278
STR
9–311
IPR036278
G3DSA:2.120.10.10
STR
176–324
G3DSA:2.120.10.10
G3DSA:2.120.10.10
STR
176–310
G3DSA:2.120.10.10
cd15482
ENZ
234–309
cd15482
UOF79366.1
1 340
Architecture
STR
STR 9-324 |
Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Tail Spike Domain Segmentation

Tail Spike Domain Segmentation

This protein has been segmented into three structural domains: N-terminal, central domain, and C-terminal.

Domain Layout
N-terminal
Central
C-terminal
UOF79366.1
1 340
Domain Start End Length (AA) Confidence
N-terminal 1 307 307 0,0807
Central domain 308 329 23 0,5103
C-terminal 330 340 10 0,1734
Legend: N-terminal Central domain C-terminal
3D Structure with Domain Coloring

The structure is colored according to the domain segmentation: N-terminal (blue), Central (green), C-terminal (pink).

Domain Coloring
N-terminal
1-307
Central
308-329
C-terminal
330-340

Taxonomy

  Name Taxonomy ID Lineage
Phage Caudoviricetes sp.
[NCBI] 		2832643 Viruses > Duplodnaviria > Heunggongvirae > Uroviricota > Caudoviricetes
Host No host information

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
UOF79366.1 [NCBI]
Genbank nucleotide accession
MW202615 [NCBI]
CDS location
range 20305 -> 21327
strand +
CDS
ATGGATAAACTATATTCGTCTTTCGGAAAAACCCTTTATACTTCTTCAGATTATGGACAAACTTGGGACGCTATATCTATTAATTCTAATCTTGATATTGTTTATTTGAGTTTGGCTAATAAGAATTATTTCATATTTAGATCTGATTCAGGAGTAATAGAAGGACATTCTTATAACAGTATGTTTGGATACCAAAGTATTGTTTCAGAAAATGATGTTCTCTTATGTACTAATAGAGTAGGAAGCAAGATTGTTATTGCTGGTCACGATGGTAATAATGTATATACAAGAGTATCGCTTAATGAAGGATTAAGCTATCATGGAAATTCTAATTTTCCTGTTGGAATTTTATCCCTTGTTCCAAACGGTGGAACCTCTAGTGCTATATTTTGGAACGGGACTAAGTATGTTGTCCTTGGACCTCTCCAAGACGGAGCTTTTAATACACTTACGTCTCCAGATGGATTTGTTTGGACTCATCAAACAGCAGCAACACCTTTAGATTTCCGCAACGTATATAGTGGATTTGTATATAACAGTAATGTATATTATTTAAATAAAGTTAATGGTGATTCAACATCACAGGTTAGACTTAATCACTTTAATGGAGTATCTGCTTGGACTACCCTTCCTAATATAGTCTATGGAACTGGTGCTGATAATTTAGACAATATTTATTCTGCTACCAACGGAACCTCTTCTATATTGATGTCTGTTAGAGACAGTAGTACTGGTAATTATAGACTTCTTAGATCTACAAATGGAGGGACCAGTTGGACTACAATCATAGATTATACAGCAGGATCTAACCCACACTATATAAGTAGCATATTGAGGGTTAATAGTAATTATGTATTAGAAAAAGTATACACGACTTCAAATACCCAAACATACTCAGTATCTACAAATGATGGTGTAACTTTTACTGAATATTCAGAAGCTATTAATAAAGGCCTTCCAGTAGTAGGTCCTGAAGATCTTGGTCTTTTTTGGAAAGAATTAATATTATCAACACAAAGTTAA

Genome Context

Genome Context

Tertiary structure

PDB ID
9ad6912403bc7c5590b2509a7e7d05d34ea33096ba797ed08b83e37eb1a08ea5
ESMFold
Source ESMFold
Method ESMFold
Resolution 0,7144
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50