Protein

View in Explore
Genbank accession
WYW00494.1 [GenBank]
Protein name
tail fiber protein
RBP type
TF
Evidence GenBank
Probability 1,00
TF
Evidence RBPdetect
Probability 0,90
TF
Evidence RBPdetect2
Probability 0,96
Protein sequence
MAEAPKTTVTYPLDGTNRDFLIPFEYLARKFVQVTLVGVDRKVLTLNIDYRFTQRTIVTTTKNWGPADGYNLIEVRRYTSATERLVDFSDGSILRAYDLNTSQVQSLHIAEEGRDIATDTIGVNNDGDLDARGRKIVNVADGTGDFDAVNLRQQKQWAGSALNQADRAQREADRATVQANASQASNAQSAAQAQESLKWANESSRHAGLSKASAEASQTSNVQSFQNLELARAQVAEATKQAGLATSNGAAQVQLATAQANRSRDEADRSTAQANASAGSAVTSKNEADRSTREADRAKTEADKLGNMNALATAIREVNVAGGKVEVAAGWEWNADVIAVDKFRSRSSASITFNAQLVGALGASFTQRILTQADVQAGGEVAAGQTVRIRGTGANAHLWFMQPDGNENALIYAEPAGAMHFRSRSQGDTLTMNVDRSMDAGGNFRIAGASSTAGRHTAGELLSNSTVWSGGGGSWLAGDGNVYGPAWGGYLSTWMGNQLAAKQPKYVFQAGRTDLGAPGGTQTPSYRINFHTPIADPVITLGLYVSGAFQSKWNMNIHSVDNSGFNIYVQSMNSQNLVLHWMATNPTNV
Physico‐chemical
properties
protein length:589 AA
molecular weight: 62983,69860 Da
isoelectric point:6,28732
aromaticity:0,07131
hydropathy:-0,41494

Domains

Domains [InterPro]
IPR005604
ATT
1–131
IPR005604 Coil Coil
DC_0657
STR
1–587
DC_0657
IPR011049
STR
115–153
IPR011049
WYW00494.1
1 589
Architecture
ATT
STR
ATT 1-131 | STR 132-587 |
Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Taxonomy

  Name Taxonomy ID Lineage
Phage Pseudomonas phage vB_PpuP-Roomu-1
[NCBI] 		3132635 Viruses > Duplodnaviria > Heunggongvirae > Uroviricota > Caudoviricetes
Host Pseudomonas putida KT2440 and
[NCBI] 		1481724 Heterolobosea > Eutetramitea > Lyromonadida > Psalteriomonadidae > Monopylocystis >

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
WYW00494.1 [NCBI]
Genbank nucleotide accession
PP496431.1 [NCBI]
CDS location
range 35100 -> 36869
strand +
CDS
ATGGCTGAAGCTCCAAAGACTACGGTAACGTATCCGCTCGACGGGACGAACCGAGACTTTCTGATCCCCTTCGAGTACCTTGCCCGGAAGTTCGTGCAGGTCACCCTCGTTGGTGTGGACCGGAAGGTATTGACCCTCAACATCGACTATCGCTTCACCCAGCGTACCATCGTCACCACGACGAAGAACTGGGGTCCGGCTGATGGTTACAACCTGATCGAAGTGCGCCGATACACCTCTGCTACAGAGCGTCTGGTGGACTTCAGTGACGGTTCGATTCTCCGTGCGTATGACCTGAACACCTCTCAGGTTCAATCGCTGCACATCGCTGAAGAAGGCCGTGACATCGCGACCGACACTATCGGCGTAAACAACGATGGTGACCTTGATGCCCGTGGTCGTAAGATCGTGAACGTGGCTGACGGCACCGGTGACTTCGATGCAGTTAACCTGCGACAACAGAAGCAGTGGGCAGGATCTGCATTGAACCAAGCGGACCGGGCACAGCGTGAAGCTGACCGTGCAACCGTACAGGCCAATGCGTCCCAAGCGTCCAACGCTCAGTCGGCTGCTCAGGCTCAGGAGTCCCTTAAGTGGGCCAATGAGTCCTCTCGCCATGCTGGTCTGTCGAAGGCATCCGCTGAGGCGTCCCAAACGTCCAACGTACAGTCCTTCCAGAACCTTGAGCTGGCCCGTGCGCAAGTCGCTGAGGCTACCAAGCAGGCTGGCTTAGCGACCTCTAACGGTGCCGCTCAGGTCCAACTGGCGACCGCTCAGGCCAACCGTTCCCGTGACGAGGCAGATCGTTCGACCGCTCAGGCTAACGCTTCGGCTGGCTCTGCGGTGACCTCTAAGAACGAGGCTGATCGTTCCACTCGCGAGGCAGACCGTGCGAAGACTGAAGCTGACAAGCTCGGCAACATGAACGCACTGGCTACTGCTATCCGTGAGGTGAACGTGGCTGGCGGGAAGGTCGAGGTCGCAGCCGGGTGGGAATGGAACGCTGACGTTATCGCTGTGGACAAATTCCGCTCGCGCAGCTCGGCAAGCATCACGTTCAACGCCCAGCTTGTAGGCGCTCTTGGTGCTTCGTTCACGCAACGTATCTTGACTCAGGCTGACGTTCAGGCGGGTGGTGAAGTCGCGGCAGGGCAGACTGTACGCATCCGAGGCACAGGGGCAAACGCTCACCTGTGGTTCATGCAGCCCGATGGTAACGAGAATGCTCTTATCTATGCTGAACCGGCAGGCGCTATGCACTTCCGCTCTCGCTCCCAAGGTGACACTCTCACCATGAACGTGGACCGCTCTATGGATGCTGGTGGTAACTTCCGCATCGCGGGGGCAAGTTCCACGGCTGGTAGACATACGGCTGGTGAACTGCTGTCGAACTCGACGGTATGGTCCGGTGGCGGTGGGTCGTGGCTTGCAGGTGACGGCAACGTGTACGGCCCTGCTTGGGGCGGATACCTTTCGACATGGATGGGTAACCAGCTCGCAGCTAAACAGCCAAAGTATGTGTTCCAAGCAGGTCGCACCGATCTTGGCGCACCGGGCGGTACTCAGACCCCAAGCTACCGCATTAACTTCCACACACCTATAGCAGACCCAGTTATCACTCTGGGCCTGTATGTCAGCGGTGCGTTCCAGTCCAAGTGGAACATGAACATTCACAGCGTGGACAACAGCGGCTTTAACATCTACGTCCAGTCAATGAACTCGCAGAATCTGGTGCTTCACTGGATGGCGACAAACCCAACCAACGTATAA

Genome Context

Genome Context

Tertiary structure

PDB ID
e3a0fd077254f8f2da55dc869d232724fd88f9a0151c7db0fb013c17f51bc9c0
ESMFold
Source ESMFold
Method ESMFold
Resolution 0,7188
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50

Literature

Title Authors Date PMID Source
Isolation and characterization of a phage collection against Pseudomonas putida Brauer,A., Rosendahl,S., Kangsep,A., Rikberg,R., Lewanczyk,A.C., Horak,R. and Tamman,H. — — GenBank