Protein

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Genbank accession
AUR91467.1 [GenBank]
Protein name
tail fiber protein
RBP type
TF
Evidence Phold
Probability 1,00
TSP
Evidence RBPdetect
Probability 0,70
Protein sequence
MPILNPDQVGGQGSGGGTSDTTENGQIPVKENGSFVASGMQKLADGQILAPKNFGVESASIDFGELVTMSEQSGFVGIKNNFTDNKYLLVDFESPRNAPANSPRIFRTIEPEVTFDVQPDDSTLITGTELTFDYTTTLNAFTNSLTFKTQGAMSNVRVKISPQGSDLGLKYLPDKASWLSESGGLDFNDGLHEVDIFDSSLALTRNTPITVHIKADAITLLGNSSNIPYLQIKKQDAEFNTISTRGAHQFAAAEESPVIARPNTEWYAVFAASASNESIVINLEDGVNSSDRIEFVFAFQLGNNSVVFNANSDIGFFNSNINRFDFFPQLILTNQSRRVVFEWYGSDWRIVP
Physico‐chemical
properties
protein length:352 AA
molecular weight: 38458,17460 Da
isoelectric point:4,49900
aromaticity:0,10227
hydropathy:-0,23381

Domains

Domains [InterPro]
DC_1057
STR
4–352
DC_1057
AUR91467.1
1 352
Architecture
STR
STR 4-352
Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Tail Spike Domain Segmentation

Tail Spike Domain Segmentation

This protein has been segmented into three structural domains: N-terminal, central domain, and C-terminal.

Domain Layout
N-terminal
Central
C-terminal
AUR91467.1
1 352
Domain Start End Length (AA) Confidence
N-terminal 1 180 180 0,8798
Central domain 181 341 162 0,0511
C-terminal 342 352 10 0,9928
Legend: N-terminal Central domain C-terminal
3D Structure with Domain Coloring

The structure is colored according to the domain segmentation: N-terminal (blue), Central (green), C-terminal (pink).

Domain Coloring
N-terminal
1-180
Central
181-341
C-terminal
342-352

Taxonomy

  Name Taxonomy ID Lineage
Phage Vibrio phage 1.161.O._10N.261.48.C5
[NCBI] 		1881340 No lineage information
Host Vibrio lentus
[NCBI] 		136468 cellular organisms > Bacteria > Pseudomonadati > Pseudomonadota > Gammaproteobacteria > Vibrionales

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
AUR91467.1 [NCBI]
Genbank nucleotide accession
MG592529.1 [NCBI]
CDS location
range 15800 -> 16858
strand +
CDS
ATGCCTATATTAAATCCAGACCAAGTTGGTGGACAAGGATCTGGTGGAGGTACTTCAGATACCACTGAGAATGGACAAATACCAGTAAAAGAGAACGGTTCCTTTGTAGCATCTGGGATGCAGAAGCTTGCAGATGGTCAAATATTAGCACCTAAGAATTTTGGGGTTGAGTCTGCGTCAATTGACTTTGGTGAGCTGGTAACAATGTCGGAGCAGAGTGGGTTTGTTGGCATTAAAAACAACTTCACCGACAATAAATATTTACTAGTAGACTTCGAATCACCTAGAAACGCTCCAGCCAATAGTCCTCGAATATTTAGAACAATAGAGCCAGAAGTTACATTTGATGTTCAACCTGATGATTCAACATTAATTACTGGCACAGAGTTAACATTTGACTATACAACAACCTTAAACGCATTTACAAACTCTTTGACTTTCAAGACTCAAGGAGCAATGAGCAATGTCAGAGTTAAGATATCCCCGCAAGGTAGTGATTTAGGGTTAAAGTACCTTCCAGATAAAGCATCATGGCTGAGTGAGTCAGGGGGTTTGGATTTTAACGACGGACTACATGAAGTCGATATATTTGATTCGTCTCTAGCTCTGACTAGAAATACCCCTATAACAGTTCACATTAAGGCGGATGCAATAACATTGCTCGGCAATTCATCAAATATTCCGTATCTTCAAATAAAAAAGCAAGATGCTGAGTTTAATACTATTTCAACAAGAGGGGCGCATCAATTTGCAGCAGCAGAAGAATCTCCAGTAATCGCTAGACCAAATACAGAATGGTATGCCGTATTTGCAGCATCAGCTAGTAATGAGTCAATAGTTATAAACCTAGAGGATGGTGTTAATAGCTCTGACAGGATTGAGTTTGTTTTTGCTTTCCAGCTTGGTAATAATAGTGTTGTTTTTAATGCAAACTCTGATATTGGATTTTTTAATAGTAATATCAATCGATTTGATTTCTTTCCTCAGCTTATACTTACAAATCAAAGCAGGAGAGTTGTTTTTGAGTGGTACGGTTCAGATTGGCGCATAGTGCCGTAG

Genome Context

Genome Context

Tertiary structure

PDB ID
66dac09b167504cd4a503f0fd19233a5dbfabb19a6bcf0a969d138514adb8e42
ESMFold
Source ESMFold
Method ESMFold
Resolution 0,4941
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50

Literature

Title Authors Date PMID Source
A major lineage of nontailed dsDNA viruses as unrecognized killers of marine bacteria Kauffman,K.M., Hussain,F.A., Yang,J., Arevalo,P., Brown,J.M., Chang,W.K., VanInsberghe,D., Elsherbini,J., Cutler,M.B., Kelly,L. and Polz,M.F. 2018-01-24 — GenBank