Protein

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Genbank accession
AZV02263.1 [GenBank]
Protein name
hypothetical protein
RBP type
TSP
Evidence RBPdetect
Probability 0,90
Protein sequence
MALTNITVLGSTIHVSNGEVISIFDDMPIPSSNISVKNGERISLPLVTSLNTSNGERVNLQSEPHFEGGVSVSQGSVSSVKRVFSISVANGGTVRNIGWRDGDGNTLDREVISSGLNVSISNTLVVNGGDIINSSGSECNERGMKPVDISVSSGETISVFRGIQEESEDIQSSFGCSVVLTGTAINGIIQDVTVPTIITDTSIVVGREFVKGLFSEIPNISLDSSIQLGVRLYSYDNKLLNVLSFTSAYFTLDGELTLYASLDSVNNIIHTVAKPSELQGLVRGKVYNMYVHTVDKAGYPSIVLSRKLRFY
Physico‐chemical
properties
protein length:311 AA
molecular weight: 33290,08990 Da
isoelectric point:4,96923
aromaticity:0,06109
hydropathy:0,08424

Domains

Domains [InterPro]

No domain annotations available.

Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Tail Spike Domain Segmentation

Tail Spike Domain Segmentation

This protein has been segmented into three structural domains: N-terminal, central domain, and C-terminal.

Domain Layout
N-terminal
Central
C-terminal
AZV02263.1
1 311
Domain Start End Length (AA) Confidence
N-terminal 1 304 304 0,9805
Central domain 305 304 1 0,0911
C-terminal 305 311 6 0,9279
Legend: N-terminal Central domain C-terminal
3D Structure with Domain Coloring

The structure is colored according to the domain segmentation: N-terminal (blue), Central (green), C-terminal (pink).

Domain Coloring
N-terminal
1-304
Central
305-304
C-terminal
305-311

Taxonomy

  Name Taxonomy ID Lineage
Phage Pectobacterium phage Arno18
[NCBI] 		2500578 Uroviricota > Caudoviricetes > Andersonviridae > Arnovirus > Arnovirus arno18
Host Pectobacterium carotovorum subsp. carotovorum
[NCBI] 		555 Bacteria > Proteobacteria > Gammaproteobacteria > Enterobacteriales > Enterobacteriaceae > Pectobacterium

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
AZV02263.1 [NCBI]
Genbank nucleotide accession
MK290738 [NCBI]
CDS location
range 41612 -> 42547
strand +
CDS
ATGGCACTTACCAACATCACAGTGCTGGGTTCAACAATCCATGTATCAAACGGGGAAGTCATTTCAATTTTTGATGACATGCCAATACCCAGCTCAAACATCTCTGTAAAGAACGGGGAGAGAATCAGCCTACCACTGGTTACCTCGCTGAACACCTCAAACGGTGAGAGGGTTAATCTCCAGAGTGAACCACACTTTGAAGGTGGCGTGTCAGTATCACAAGGCTCAGTATCGTCAGTCAAGCGTGTATTCAGTATCAGCGTTGCAAACGGTGGAACTGTAAGAAACATAGGCTGGCGTGATGGGGATGGAAACACCCTTGACAGGGAAGTTATTTCATCAGGTCTCAACGTATCAATTTCAAACACCCTCGTAGTTAACGGTGGAGACATTATTAACTCCAGTGGCTCAGAGTGTAATGAACGTGGTATGAAGCCAGTTGATATCTCAGTTAGTAGTGGTGAGACCATCAGTGTTTTCCGAGGAATTCAAGAAGAGTCTGAGGATATCCAATCGAGTTTTGGTTGCTCAGTGGTGTTGACAGGTACTGCCATAAATGGTATCATTCAAGACGTAACAGTGCCAACCATCATTACCGACACATCAATTGTTGTTGGTAGAGAGTTCGTTAAGGGATTATTTTCAGAAATACCTAATATTTCTCTTGACAGTTCTATTCAATTGGGTGTAAGGTTGTACTCATACGACAACAAACTCTTGAATGTCCTTTCTTTTACATCAGCGTACTTCACTCTCGACGGTGAGTTAACCCTCTACGCAAGTTTAGACTCAGTTAATAACATTATCCACACAGTTGCTAAGCCATCAGAGCTTCAAGGACTTGTGCGTGGTAAAGTCTACAACATGTACGTCCACACTGTTGATAAAGCTGGTTACCCTTCAATTGTTCTATCTCGAAAATTAAGGTTCTATTAA

Genome Context

Genome Context

Tertiary structure

PDB ID
87a9b15e22c325423f3daceb5fb420adafade65b708af804787ae7894fe7dd3a
ESMFold
Source ESMFold
Method ESMFold
Resolution 0,4649
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50