Protein

View in Explore
Genbank accession
QBI83896.1 [GenBank]
Protein name
tail fiber protein
RBP type
TF
Evidence UniProt/TrEMBL
Probability 1,00
TF
Evidence Phold
Probability 1,00
TF
Evidence RBPdetect
Probability 0,90
Protein sequence
MSLTMGPNTGLLINGAPGEGHYSELIRMLRWDDFLRQPVVKGRVATLPTSGQAEGDTYIFTGAGANQNRLARWWATGATTPIWEYMPPRLGWRVQVANETTPSGQVKTYEFGGSGWTELVGGMSDAPSDGKRYARLNNAWAGLGTAAVADILGTVSQAGGVPTGAIYEGGSNANGSYVRLADGTQICSSSLLTFTAGSTSVGASWTFPASFVSPSLMFGTVVASGAGADYDPGVAARNLGAVYFNASTNSAALGFLCISSASFTPGAQTRSNRAIAIGRWF
Physico‐chemical
properties
protein length:281 AA
molecular weight: 29231,32470 Da
isoelectric point:7,74877
aromaticity:0,10320
hydropathy:-0,02527

Domains

Domains [InterPro]
DC_0857
STR
21–281
DC_0857
G3DSA:6.20.230.10
ATT
121–145
G3DSA:6.20.230.10
QBI83896.1
1 281
Architecture
STR
ATT
STR
STR 21-120 | ATT 121-145 | STR 146-281
Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Taxonomy

  Name Taxonomy ID Lineage
Phage Pseudomonas phage vB_Pae_CF125a
[NCBI] 		2563543 Viruses > Duplodnaviria > Heunggongvirae > Uroviricota > Caudoviricetes
Host Pseudomonas aeruginosa
[NCBI] 		287 cellular organisms > Bacteria > Pseudomonadati > Pseudomonadota > Gammaproteobacteria > Pseudomonadales

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
QBI83896.1 [NCBI]
Genbank nucleotide accession
MK511061.1 [NCBI]
CDS location
range 37847 -> 38692
strand +
CDS
ATGAGTCTTACGATGGGGCCGAACACTGGCCTGCTGATCAACGGCGCCCCCGGTGAGGGGCATTACAGCGAACTGATCCGCATGTTGCGCTGGGATGACTTCCTGCGCCAACCGGTCGTCAAGGGCCGCGTCGCCACGCTGCCGACTTCCGGCCAGGCCGAGGGTGACACTTACATTTTCACCGGGGCCGGGGCGAACCAGAACCGCTTGGCCCGCTGGTGGGCGACTGGCGCGACCACGCCCATTTGGGAGTACATGCCGCCCAGGCTGGGCTGGCGTGTCCAGGTCGCCAACGAGACGACGCCGAGCGGCCAGGTCAAAACATATGAGTTCGGGGGCAGCGGTTGGACTGAGTTGGTGGGCGGTATGTCGGACGCGCCGAGCGACGGGAAGCGCTACGCTCGACTGAACAACGCGTGGGCTGGCTTGGGGACTGCTGCCGTCGCCGATATTCTCGGGACGGTCTCTCAGGCCGGCGGTGTGCCAACTGGTGCGATCTACGAGGGCGGCAGTAACGCGAACGGAAGTTACGTCAGGCTCGCAGACGGAACGCAAATTTGCTCCAGCAGCCTTTTAACGTTTACTGCGGGTTCAACGTCGGTGGGTGCGTCTTGGACGTTCCCGGCCAGCTTTGTGTCGCCGTCGCTGATGTTTGGCACCGTTGTCGCATCGGGAGCCGGCGCAGACTATGACCCCGGCGTCGCTGCGAGGAACCTGGGGGCTGTTTACTTCAATGCGTCAACAAACTCTGCTGCACTGGGGTTTCTCTGCATCTCGTCTGCATCGTTCACCCCTGGCGCCCAAACTCGAAGTAACCGTGCTATCGCCATTGGGAGGTGGTTCTGA

Genome Context

Genome Context

Tertiary structure

PDB ID
4fdeb1f63fe68b93e9d265ce519f5d9b70720448271679c125652915531602b9
ESMFold
Source ESMFold
Method ESMFold
Resolution 0,7608
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50

Literature

Title Authors Date PMID Source
Mobilizing temperate bacteriophage communities and resolving individual phage genomes from cystic fibrosis and bronchiectasis Pseudomonas aeruginosa isolates Tariq,M.A., Everest,F.L.C., Cowley,L.A., Wright,R., Holt,G.S., Ingram,H., Duignan,L.A.M., Lanyon,C.V., Perry,A., Perry,J.D., Bourke,S., Brockhurst,M.A., Bridge,S.H., Soyza,A.D. and Smith,D.L. 2019 — GenBank