Protein

View in Explore
Genbank accession
WQZ00678.1 [GenBank]
Protein name
hypothetical protein
RBP type
TSP
Evidence RBPdetect
Probability 0,62
Protein sequence
MDAGLRVINDSGIVQIDSTYSNYYLHSTQTVTLASNTAGSGVSTNVPYPGQCLIALRASVPVTVAAETASTVNITSTAAAAGSPVTVYFFTPANLSPLVGTGEGGLRVFGPTGALVFDNSAKMVKILAYVPNAVEGQGVNTGVNGTYAAVVLNEAYSVTYNRLSGGGANNNASWTATDSTGLVQITSTGCVFSNRTKTSGSFQATDNPPPQPLSIGPMSIILLDVANY
Physico‐chemical
properties
protein length:228 AA
molecular weight: 23297,75440 Da
isoelectric point:4,86698
aromaticity:0,07456
hydropathy:0,17281

Domains

Domains [InterPro]

No domain annotations available.

Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Tail Spike Domain Segmentation

Tail Spike Domain Segmentation

This protein has been segmented into three structural domains: N-terminal, central domain, and C-terminal.

Domain Layout
N-terminal
Central
C-terminal
WQZ00678.1
1 228
Domain Start End Length (AA) Confidence
N-terminal 1 203 203 0,1780
Central domain 204 217 15 0,0341
C-terminal 218 228 10 0,9977
Legend: N-terminal Central domain C-terminal
3D Structure with Domain Coloring

The structure is colored according to the domain segmentation: N-terminal (blue), Central (green), C-terminal (pink).

Domain Coloring
N-terminal
1-203
Central
204-217
C-terminal
218-228

Taxonomy

  Name Taxonomy ID Lineage
Phage Xanthomonas phage NP1
[NCBI] 		3110517 Viruses > Duplodnaviria > Heunggongvirae > Uroviricota > Caudoviricetes
Host Xanthomonas oryzae pv. oryzae
[NCBI] 		64187 Pseudomonadota > Gammaproteobacteria > Lysobacterales > Lysobacteraceae > Xanthomonas > Xanthomonas oryzae

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
WQZ00678.1 [NCBI]
Genbank nucleotide accession
OR966858 [NCBI]
CDS location
range 19202 -> 19888
strand +
CDS
ATGGACGCAGGCCTACGAGTTATAAATGATTCAGGTATTGTGCAGATTGATAGTACTTACTCTAACTATTATCTTCACTCTACGCAAACTGTTACACTGGCATCAAACACTGCGGGATCGGGTGTATCTACGAATGTGCCATACCCGGGGCAGTGCCTTATTGCATTGCGTGCTTCCGTACCGGTTACTGTCGCCGCAGAGACGGCAAGCACTGTAAATATAACCTCAACTGCCGCTGCTGCGGGCTCACCTGTGACAGTGTATTTTTTCACGCCGGCAAACCTATCCCCCCTTGTTGGTACTGGGGAGGGCGGCCTCAGAGTATTTGGCCCAACAGGTGCACTTGTATTCGACAACTCTGCAAAGATGGTAAAGATATTGGCTTATGTACCTAATGCTGTTGAGGGGCAGGGTGTGAACACAGGTGTAAACGGTACATATGCTGCGGTAGTGCTGAATGAGGCATATTCGGTGACTTACAACAGGCTTAGCGGCGGAGGTGCGAACAATAATGCCTCTTGGACAGCAACAGACTCAACTGGGCTGGTGCAGATCACATCCACTGGGTGTGTGTTCTCAAACCGGACAAAGACAAGTGGTTCTTTCCAGGCGACGGATAACCCGCCGCCTCAGCCTTTATCTATAGGTCCGATGTCTATCATCCTGCTTGATGTGGCAAACTATTAG

Genome Context

Genome Context

Tertiary structure

PDB ID
743c427d275575bd432fa5c6afc65335d4f7d69b755e49f4df322161ccabca4f
ESMFold
Source ESMFold
Method ESMFold
Resolution 0,8561
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50