Protein

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Genbank accession
AFQ22096.1 [GenBank]
Protein name
tail fiber protein
RBP type
TF
Evidence Phold
Probability 1,00
TSP
Evidence DepoScope
Probability 1,00
TSP
Evidence RBPdetect
Probability 0,91
TSP
Evidence RBPdetect2
Probability 0,95
Protein sequence
MTTYATGNPLGSKDPRDLYDNAENFDAAMNDRTNVAWRDRFGVSRKTWFGIEDQVNTSLARSGFELPPLQYVDGSPLTVDRSTQIIERGGNLYSVKLPSSFPVVLSGNWSEDEVLLVVRGDQSLRQEITSTSPSEGSSIIGNSTVSVSSVADIKNQTKRADLKLSLSSYHPLGKSGGGTFIWSPSTPKSNHDGGTIFSPTVPWDGSQSTLSDYLDGEGETDPSGSGCWLRIFDEVKLEYFGGLISETIDSSASFLAAIKYCLSNNKELNLPDGVVRLNSPAVINGSTTLFSSVKIRGTFKTSGVSAGYVVSRVGSLIYTDGNSALDISFNDFRNENFDIRGVAFVDTSFYPAGTPVNPNPAILIRKGNPDASSNRYITGNVLEDVAFVSYQDAVKTIGVATGLPTYNYVGPTSLNRVYFYKCGTAMHLQDCTYNHLFLNECLLFDLSSQSIFLTKTVSGTGGNVDVTFSNCVFESIWGIMNTANGLTSSTKRNTAVFNSCNREFCGLYGPTGGGGNFAGSPLGYIGHTDVMINGNWERGQAFGETALPAIDSGAVIFASRYVDVLMNGGQVGSPEYVNVVDFSGTIPASGSLTKTFNVSGSFVLNADVAYDDGFGGHQNVVAYGNPTGSKARDVTGTIISAGLTATYGDGPSGAAFTVTFNNGTASPINVKIRVTNKAGLIVTVS
Physico‐chemical
properties
protein length:685 AA
molecular weight: 72853,05440 Da
isoelectric point:4,96974
aromaticity:0,09927
hydropathy:-0,13168

Domains

Domains [InterPro]
DC_1559
ATT
1–174
DC_1559 DC_1646
IPR011050
STR
247–514
IPR011050
AFQ22096.1
1 685
Architecture
ATT
STR
ATT 1-174 | STR 233-685
Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Tail Spike Domain Segmentation

Tail Spike Domain Segmentation

This protein has been segmented into three structural domains: N-terminal, central domain, and C-terminal.

Domain Layout
N-terminal
Central
C-terminal
AFQ22096.1
1 685
Domain Start End Length (AA) Confidence
N-terminal 1 250 250 0,9943
Central domain 251 573 324 0,9927
C-terminal 574 685 111 0,9797
Legend: N-terminal Central domain C-terminal
3D Structure with Domain Coloring

The structure is colored according to the domain segmentation: N-terminal (blue), Central (green), C-terminal (pink).

Domain Coloring
N-terminal
1-250
Central
251-573
C-terminal
574-685

Taxonomy

  Name Taxonomy ID Lineage
Phage Pseudomonas phage YMC/01/01/P52_PAE_BP
[NCBI] 		1191380 No lineage information
Host Pseudomonas aeruginosa
[NCBI] 		287 cellular organisms > Bacteria > Pseudomonadati > Pseudomonadota > Gammaproteobacteria > Pseudomonadales

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
AFQ22096.1 [NCBI]
Genbank nucleotide accession
JX403939.1 [NCBI]
CDS location
range 46224 -> 48281
strand -
CDS
ATGACTACGTACGCCACCGGTAATCCGCTGGGCTCTAAAGACCCGCGTGATTTGTACGACAACGCCGAGAACTTCGACGCGGCGATGAATGACCGTACGAATGTTGCGTGGAGAGACAGGTTCGGTGTTTCGCGGAAAACCTGGTTTGGCATCGAGGATCAGGTAAACACCTCCCTCGCCCGATCTGGGTTCGAGTTGCCACCGTTGCAGTATGTCGATGGTTCCCCGTTGACCGTAGATCGCTCGACCCAGATCATCGAGCGGGGTGGCAATCTTTATAGTGTAAAACTTCCATCTTCGTTCCCTGTCGTTCTTTCTGGCAATTGGTCTGAAGATGAAGTTTTACTTGTTGTACGTGGCGATCAGTCTCTTCGCCAAGAAATAACTAGCACTTCTCCAAGTGAAGGTTCTTCCATCATTGGTAATTCGACCGTCTCTGTTTCTTCTGTCGCTGATATAAAAAATCAGACAAAGAGAGCGGATCTCAAACTATCTTTGTCCTCCTATCATCCTCTTGGAAAATCAGGCGGCGGGACCTTCATTTGGAGTCCATCAACTCCAAAGTCTAATCATGATGGAGGAACAATTTTTAGTCCAACCGTTCCATGGGATGGTTCTCAGTCAACTCTTTCCGACTACCTAGATGGAGAAGGCGAAACTGACCCTTCTGGATCTGGCTGTTGGTTAAGGATTTTCGATGAAGTTAAGTTGGAATATTTTGGCGGACTAATAAGTGAAACTATAGATTCTTCAGCATCTTTTTTGGCTGCAATTAAATATTGTTTGTCAAACAATAAAGAGCTTAATCTTCCAGATGGTGTTGTTCGCCTTAATTCTCCTGCTGTAATTAATGGATCTACCACTCTTTTCTCTTCTGTTAAGATTCGAGGAACCTTCAAGACGAGTGGAGTATCTGCTGGGTATGTGGTAAGCCGAGTAGGAAGCCTTATCTATACTGACGGTAACAGCGCTCTAGATATCTCGTTCAACGACTTCAGGAATGAAAATTTTGATATCCGTGGAGTTGCATTTGTAGATACCTCGTTCTATCCAGCCGGAACCCCTGTGAATCCAAATCCTGCAATCCTAATCAGGAAGGGAAATCCTGACGCAAGTAGTAACAGATACATAACTGGCAACGTTCTTGAGGATGTTGCCTTCGTTAGCTATCAGGACGCTGTTAAAACCATTGGGGTTGCAACAGGGTTGCCCACCTATAACTACGTTGGTCCAACCTCGTTGAATCGTGTGTATTTCTACAAGTGCGGCACCGCTATGCATCTACAGGATTGCACGTACAATCACCTGTTCCTGAACGAGTGCCTACTCTTCGATCTGTCGTCGCAGTCTATTTTCCTGACCAAGACGGTTAGCGGAACTGGCGGGAACGTAGATGTAACGTTCAGCAACTGTGTATTCGAATCAATTTGGGGGATTATGAATACTGCTAATGGATTGACGTCTTCCACGAAGCGCAACACCGCAGTTTTCAACTCGTGCAATAGAGAGTTCTGCGGCCTTTATGGACCGACTGGTGGCGGCGGAAACTTCGCAGGAAGCCCGCTTGGGTATATTGGTCATACTGATGTAATGATCAATGGCAATTGGGAGAGAGGCCAGGCATTTGGTGAAACTGCCTTGCCAGCGATTGATTCTGGCGCTGTTATTTTCGCAAGTAGGTACGTTGATGTTCTCATGAATGGCGGCCAAGTTGGTTCGCCAGAATATGTCAACGTTGTTGACTTTAGCGGAACGATTCCAGCATCTGGCAGCCTGACAAAAACTTTCAATGTGAGCGGTTCGTTTGTGTTGAATGCTGACGTCGCGTATGACGACGGGTTTGGCGGGCACCAGAACGTTGTTGCGTACGGCAACCCTACTGGCTCAAAGGCGCGGGACGTGACGGGTACGATCATTTCTGCTGGCCTGACTGCAACCTACGGCGATGGCCCATCTGGCGCGGCGTTCACGGTAACGTTCAACAACGGTACCGCGTCGCCGATCAATGTGAAGATCCGAGTCACGAACAAAGCCGGCCTGATCGTTACTGTTTCATGA

Genome Context

Genome Context

Tertiary structure

PDB ID
6466bd7bd4149ead1cf1f76303eb0b430757ec6f1d6d5bd4d919f54ad583f5af
ESMFold
Source ESMFold
Method ESMFold
Resolution 0,7103
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50