Protein

View in Explore
Genbank accession
WNO25373.1 [GenBank]
Protein name
tail fiber protein
RBP type
TF
Evidence Phold
Probability 1,00
Protein sequence
MALQNVLQTRIVDHNSEGELLNVALLTLANAATAANEPMRKQEFDAAIAALSFDNVVESTETSLADYVTANGTGVAEGTLIYLPNAPERANRYVRRDPLESDVGTVDDFININAVSNFLREDLTAQYSGSDGIFIDDVNGFIGINDGTITEAKLATAYTDTVAKKGDAATYTDLGLAEDAIQALQAADATHSQTVEYAVVWVDQGGGLHTATIDTSTDFGTHKVQVRLLKDNGDVDGYLEHISTANIQIESNDSAVRLTTDSGTVVASTLVAQVTGTPV
Physico‐chemical
properties
protein length:279 AA
molecular weight: 29557,10800 Da
isoelectric point:4,17729
aromaticity:0,05735
hydropathy:-0,09427

Domains

Domains [InterPro]

No domain annotations available.

Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Taxonomy

  Name Taxonomy ID Lineage
Phage Vibrio phage vB_VpaP-MS02
[NCBI] 		3075130 Viruses > Duplodnaviria > Heunggongvirae > Uroviricota > Caudoviricetes
Host Vibrio parahaemolyticus
[NCBI] 		670 cellular organisms > Bacteria > Pseudomonadati > Pseudomonadota > Gammaproteobacteria > Vibrionales

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
WNO25373.1 [NCBI]
Genbank nucleotide accession
OR102882.1 [NCBI]
CDS location
range 45540 -> 46379
strand +
CDS
ATGGCACTTCAAAATGTTCTACAAACCCGTATTGTTGACCACAACAGTGAAGGTGAATTGCTTAACGTAGCTTTGCTTACATTAGCTAACGCTGCTACCGCAGCTAATGAACCAATGCGTAAACAAGAGTTTGACGCTGCAATTGCTGCTCTATCTTTTGATAATGTAGTTGAGTCTACTGAAACTTCTCTAGCGGATTACGTTACTGCTAATGGTACTGGCGTAGCTGAAGGTACTCTAATCTATCTACCTAATGCTCCAGAACGCGCTAATCGTTATGTACGTCGTGACCCTCTAGAATCTGATGTAGGTACGGTAGATGACTTTATTAATATCAATGCTGTATCTAACTTCCTACGTGAAGACCTTACTGCCCAGTATTCAGGTAGTGATGGTATCTTCATTGATGATGTTAATGGTTTCATCGGTATTAATGACGGTACAATTACTGAAGCTAAACTAGCTACAGCGTATACAGATACAGTAGCTAAGAAAGGTGATGCAGCAACGTATACTGACCTTGGTTTGGCAGAAGATGCAATTCAAGCACTACAAGCTGCCGATGCTACACACTCTCAAACAGTAGAGTATGCAGTAGTATGGGTAGACCAAGGCGGTGGCTTACATACAGCTACTATTGATACTTCAACGGACTTTGGTACTCATAAAGTTCAAGTACGTCTATTGAAAGATAATGGTGACGTGGATGGTTATTTAGAACACATCTCTACAGCTAATATTCAAATTGAATCTAATGATTCCGCTGTTCGACTAACTACCGACTCAGGTACAGTAGTAGCTTCTACCCTAGTTGCTCAGGTTACTGGTACACCTGTTTAA

Genome Context

Genome Context

Tertiary structure

PDB ID
43f2b3e2038a3e712241a0751a8d0bd4f27a1796684c278cd84c5544bdb18817
ColabFold
Source ColabFold
Method ColabFold
Resolution 0,3280
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50

Literature

Title Authors Date PMID Source
Identification and characterization of three novel bacteriophages infecting fish pathogenic Vibrio spp. Moon,K., Song,S.H., Lee,J.-C., Lee,N., Ryu,S., Lee,S.M., Kim,Y.J., Chun,S.W. and Joo,J.-H. 2025-05-31 — GenBank