Protein

View in Explore
Genbank accession
UVD31654.1 [GenBank]
Protein name
tail fiber protein
RBP type
TF
Evidence Phold
Probability 1,00
TF
Evidence RBPdetect
Probability 0,90
Protein sequence
MTVTVKLITEQTTNKLVDSVNAAQAMGWFPVCGVVCFNARYTQLMTLDTDATEVPACNYFIVDAADSVSFTQRVNQLLDLNPGAVCLSPVQYAHARYIQAYGDNVDVNRPVSAVFRASFTTTGLALNQYVTANNTPQVVVFNAQALPNAALGTLDNATGIFTTARRIVGTLAITCQVRRTTGGSAAVTWGFQVETSPDGVTWTPTAGSARYINLRGAGGNNVLQVIGLTSAVDIPSGTRLRITQMTDTSSVNVGLVALPAMLGGATAAGLVFSLITTL
Physico‐chemical
properties
protein length:278 AA
molecular weight: 29232,94030 Da
isoelectric point:6,54191
aromaticity:0,07194
hydropathy:0,29460

Domains

Domains [InterPro]

No domain annotations available.

Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Taxonomy

  Name Taxonomy ID Lineage
Phage Escherichia phage Pondi
[NCBI] 		2972476 Viruses > Duplodnaviria > Heunggongvirae > Uroviricota > Caudoviricetes
Host Escherichia coli
[NCBI] 		562 cellular organisms > Bacteria > Pseudomonadati > Pseudomonadota > Gammaproteobacteria > Enterobacterales

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
UVD31654.1 [NCBI]
Genbank nucleotide accession
OP136151.1 [NCBI]
CDS location
range 9178 -> 10014
strand -
CDS
ATGACCGTTACCGTCAAGCTCATCACCGAGCAAACCACTAACAAACTCGTCGACTCTGTAAACGCGGCTCAGGCTATGGGCTGGTTCCCTGTGTGCGGCGTGGTCTGCTTCAATGCTCGCTACACTCAGCTAATGACACTGGATACCGACGCCACCGAGGTTCCCGCCTGTAACTATTTTATCGTGGACGCTGCCGACAGCGTATCGTTCACCCAGCGCGTCAATCAATTACTCGACCTTAATCCGGGCGCTGTGTGCCTTTCACCCGTGCAGTATGCACATGCTCGCTACATTCAGGCTTACGGCGATAACGTTGATGTCAACCGTCCGGTAAGTGCTGTGTTTCGTGCATCCTTCACTACTACAGGTCTTGCGCTGAATCAGTACGTTACCGCCAACAACACCCCGCAGGTTGTGGTGTTCAATGCTCAGGCATTACCTAACGCCGCTCTAGGTACGCTGGACAACGCCACAGGTATATTCACCACAGCGCGACGCATTGTCGGTACTCTGGCTATAACTTGTCAGGTGCGTCGCACTACTGGCGGTTCCGCTGCGGTAACGTGGGGTTTTCAGGTAGAGACGTCACCGGACGGCGTAACGTGGACACCAACAGCCGGGAGCGCACGTTATATCAACCTTCGCGGTGCGGGTGGTAACAACGTTTTGCAGGTCATCGGGCTGACATCAGCAGTTGACATCCCGTCCGGCACCCGCCTCCGTATTACTCAGATGACCGATACATCATCGGTTAACGTAGGACTAGTCGCACTCCCGGCTATGTTGGGTGGCGCTACAGCCGCTGGCCTGGTGTTCTCGTTAATTACCACGCTGTGA

Genome Context

Genome Context

Tertiary structure

PDB ID
ac19f6f6340642a72a694f443e431639e40cc925c5bec3ec50868f500227db33
ESMFold
Source ESMFold
Method ESMFold
Resolution 0,7795
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50

Literature

Title Authors Date PMID Source
A flexible and efficient microfluidics platform for the isolation of novel bacteriophages Sidi Mabrouk,A., Ongenae,V., Claessen,D., Brenzinger,S. and Briegel,A. 2023-01-31 — GenBank